Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RNF220Q5VTB9 MTND5P27-201ENST00000428871 1720 ntBASIC3.53□□□□□ -1.84
RNF220Q5VTB9 RNU1-75P-201ENST00000347264 129 ntBASIC3.53□□□□□ -1.84
RNF220Q5VTB9 SNORA73.2-201ENST00000364946 201 ntBASIC3.53□□□□□ -1.84
RNF220Q5VTB9 Y_RNA.414-201ENST00000384011 101 ntBASIC3.53□□□□□ -1.84
RNF220Q5VTB9 RAP1BP3-201ENST00000407180 549 ntBASIC3.53□□□□□ -1.84
RNF220Q5VTB9 RNU6-1148P-201ENST00000410992 104 ntBASIC3.53□□□□□ -1.84
RNF220Q5VTB9 RNA5SP31-201ENST00000411144 127 ntBASIC3.53□□□□□ -1.84
RNF220Q5VTB9 IFNA20P-201ENST00000436840 528 ntBASIC3.53□□□□□ -1.84
RNF220Q5VTB9 AL671855.1-201ENST00000446875 1203 ntBASIC3.53□□□□□ -1.84
RNF220Q5VTB9 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.53□□□□□ -1.84
RNF220Q5VTB9 MTND5P20-201ENST00000448677 143 ntBASIC3.53□□□□□ -1.84
RNF220Q5VTB9 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.53□□□□□ -1.84
RNF220Q5VTB9 TRBVA-201ENST00000498804 316 ntBASIC3.53□□□□□ -1.84
RNF220Q5VTB9 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.53□□□□□ -1.84
RNF220Q5VTB9 RNA5SP164-201ENST00000516533 110 ntBASIC3.53□□□□□ -1.84
RNF220Q5VTB9 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.53□□□□□ -1.84
RNF220Q5VTB9 AC107953.1-201ENST00000522216 297 ntBASIC3.53□□□□□ -1.84
RNF220Q5VTB9 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.53□□□□□ -1.84
RNF220Q5VTB9 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.53□□□□□ -1.84
RNF220Q5VTB9 AL451007.1-201ENST00000595491 289 ntBASIC3.53□□□□□ -1.84
RNF220Q5VTB9 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RNF220Q5VTB9 AC022306.2-201ENST00000617563 647 ntBASIC3.53□□□□□ -1.84
RNF220Q5VTB9 AC092794.2-201ENST00000620933 563 ntBASIC3.53□□□□□ -1.84
RNF220Q5VTB9 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.53□□□□□ -1.84
RNF220Q5VTB9 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
RNF220Q5VTB9 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
RNF220Q5VTB9 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
RNF220Q5VTB9 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RNF220Q5VTB9 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.53□□□□□ -1.84
RNF220Q5VTB9 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RNF220Q5VTB9 PWAR6-201ENST00000552334 4618 ntBASIC3.53□□□□□ -1.84
RNF220Q5VTB9 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RNF220Q5VTB9 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
RNF220Q5VTB9 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.52□□□□□ -1.85
RNF220Q5VTB9 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
RNF220Q5VTB9 RNU6-845P-201ENST00000362578 103 ntBASIC3.52□□□□□ -1.85
RNF220Q5VTB9 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.52□□□□□ -1.85
RNF220Q5VTB9 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.52□□□□□ -1.85
RNF220Q5VTB9 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.52□□□□□ -1.85
RNF220Q5VTB9 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.52□□□□□ -1.85
RNF220Q5VTB9 AC005300.1-201ENST00000428401 373 ntBASIC3.52□□□□□ -1.85
RNF220Q5VTB9 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.52□□□□□ -1.85
RNF220Q5VTB9 AC087884.1-201ENST00000469738 328 ntBASIC3.52□□□□□ -1.85
RNF220Q5VTB9 AC117503.1-201ENST00000472241 394 ntBASIC3.52□□□□□ -1.85
RNF220Q5VTB9 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.52□□□□□ -1.85
RNF220Q5VTB9 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.52□□□□□ -1.85
RNF220Q5VTB9 AC087854.1-201ENST00000519706 414 ntBASIC3.52□□□□□ -1.85
RNF220Q5VTB9 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.52□□□□□ -1.85
RNF220Q5VTB9 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.52□□□□□ -1.85
RNF220Q5VTB9 AC087241.2-201ENST00000535801 324 ntBASIC3.52□□□□□ -1.85
RNF220Q5VTB9 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.52□□□□□ -1.85
RNF220Q5VTB9 MIR5692C1-201ENST00000585309 91 ntBASIC3.52□□□□□ -1.85
RNF220Q5VTB9 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.52□□□□□ -1.85
RNF220Q5VTB9 AL357078.3-201ENST00000607528 618 ntBASIC3.52□□□□□ -1.85
RNF220Q5VTB9 MIR6134-201ENST00000617606 109 ntBASIC3.52□□□□□ -1.85
RNF220Q5VTB9 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.52□□□□□ -1.85
RNF220Q5VTB9 MIR6500-201ENST00000622700 86 ntBASIC3.52□□□□□ -1.85
RNF220Q5VTB9 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RNF220Q5VTB9 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.52□□□□□ -1.85
RNF220Q5VTB9 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.52□□□□□ -1.85
RNF220Q5VTB9 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
RNF220Q5VTB9 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
RNF220Q5VTB9 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
RNF220Q5VTB9 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.51□□□□□ -1.85
RNF220Q5VTB9 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.51□□□□□ -1.85
RNF220Q5VTB9 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.51□□□□□ -1.85
RNF220Q5VTB9 RNU6-254P-201ENST00000363377 107 ntBASIC3.51□□□□□ -1.85
RNF220Q5VTB9 SNORA62-201ENST00000365493 153 ntBASIC3.51□□□□□ -1.85
RNF220Q5VTB9 RNU1-13P-201ENST00000384499 162 ntBASIC3.51□□□□□ -1.85
RNF220Q5VTB9 RNU6-831P-201ENST00000384548 107 ntBASIC3.51□□□□□ -1.85
RNF220Q5VTB9 RNU1-101P-201ENST00000391171 127 ntBASIC3.51□□□□□ -1.85
RNF220Q5VTB9 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.51□□□□□ -1.85
RNF220Q5VTB9 MTCO3P46-201ENST00000425787 232 ntBASIC3.51□□□□□ -1.85
RNF220Q5VTB9 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.51□□□□□ -1.85
RNF220Q5VTB9 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.51□□□□□ -1.85
RNF220Q5VTB9 HMGN2P10-201ENST00000448085 265 ntBASIC3.51□□□□□ -1.85
RNF220Q5VTB9 RNU7-66P-201ENST00000459469 62 ntBASIC3.51□□□□□ -1.85
RNF220Q5VTB9 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.51□□□□□ -1.85
RNF220Q5VTB9 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.51□□□□□ -1.85
RNF220Q5VTB9 RNU6-323P-201ENST00000521915 107 ntBASIC3.51□□□□□ -1.85
RNF220Q5VTB9 AC243972.3-201ENST00000539655 198 ntBASIC3.51□□□□□ -1.85
RNF220Q5VTB9 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.51□□□□□ -1.85
RNF220Q5VTB9 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.51□□□□□ -1.85
RNF220Q5VTB9 AC021739.1-201ENST00000559631 174 ntBASIC3.51□□□□□ -1.85
RNF220Q5VTB9 AC120057.2-201ENST00000571520 271 ntBASIC3.51□□□□□ -1.85
RNF220Q5VTB9 NUTF2P8-201ENST00000604593 363 ntBASIC3.51□□□□□ -1.85
RNF220Q5VTB9 APOOP1-201ENST00000604695 592 ntBASIC3.51□□□□□ -1.85
RNF220Q5VTB9 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RNF220Q5VTB9 MIR3199-2-201ENST00000636243 86 ntBASIC3.51□□□□□ -1.85
RNF220Q5VTB9 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
RNF220Q5VTB9 ADAM3A-203ENST00000461344 2157 ntBASIC3.51□□□□□ -1.85
RNF220Q5VTB9 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
RNF220Q5VTB9 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.5□□□□□ -1.85
RNF220Q5VTB9 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RNF220Q5VTB9 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
RNF220Q5VTB9 RPL32P3-201ENST00000359025 275 ntBASIC3.5□□□□□ -1.85
RNF220Q5VTB9 RNU6-898P-201ENST00000365627 104 ntBASIC3.5□□□□□ -1.85
RNF220Q5VTB9 RNU6-1013P-201ENST00000384180 107 ntBASIC3.5□□□□□ -1.85
RNF220Q5VTB9 MIR518D-201ENST00000385014 87 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 163.4 ms