Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 RPL9P32-201ENST00000464118 620 ntBASIC3.78□□□□□ -1.8
SLC44A4Q53GD3 AP001086.1-201ENST00000494882 321 ntBASIC3.78□□□□□ -1.8
SLC44A4Q53GD3 CCDC34P1-201ENST00000507441 517 ntBASIC3.78□□□□□ -1.8
SLC44A4Q53GD3 RAC1P2-201ENST00000511164 579 ntBASIC3.78□□□□□ -1.8
SLC44A4Q53GD3 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.78□□□□□ -1.8
SLC44A4Q53GD3 SNORA19.2-201ENST00000516013 114 ntBASIC3.78□□□□□ -1.8
SLC44A4Q53GD3 RNA5SP468-201ENST00000516782 93 ntBASIC3.78□□□□□ -1.8
SLC44A4Q53GD3 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SLC44A4Q53GD3 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.78□□□□□ -1.8
SLC44A4Q53GD3 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.78□□□□□ -1.8
SLC44A4Q53GD3 AL118558.2-201ENST00000556294 238 ntBASIC3.78□□□□□ -1.8
SLC44A4Q53GD3 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.78□□□□□ -1.8
SLC44A4Q53GD3 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.78□□□□□ -1.8
SLC44A4Q53GD3 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.78□□□□□ -1.8
SLC44A4Q53GD3 AC098826.3-201ENST00000603823 466 ntBASIC3.78□□□□□ -1.8
SLC44A4Q53GD3 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.78□□□□□ -1.8
SLC44A4Q53GD3 MIR15A-201ENST00000607334 83 ntBASIC3.78□□□□□ -1.8
SLC44A4Q53GD3 AL390240.1-201ENST00000612950 384 ntBASIC3.78□□□□□ -1.8
SLC44A4Q53GD3 AC034102.8-201ENST00000615146 484 ntBASIC3.78□□□□□ -1.8
SLC44A4Q53GD3 uc_338.34-201ENST00000617467 174 ntBASIC3.78□□□□□ -1.8
SLC44A4Q53GD3 AC079684.1-201ENST00000621405 437 ntBASIC3.78□□□□□ -1.8
SLC44A4Q53GD3 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.78□□□□□ -1.8
SLC44A4Q53GD3 AL133216.2-202ENST00000634512 349 ntBASIC3.78□□□□□ -1.8
SLC44A4Q53GD3 MIR7153-201ENST00000637758 57 ntBASIC3.78□□□□□ -1.8
SLC44A4Q53GD3 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
SLC44A4Q53GD3 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SLC44A4Q53GD3 HSPA8P4-201ENST00000511877 1920 ntBASIC3.78□□□□□ -1.81
SLC44A4Q53GD3 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.81
SLC44A4Q53GD3 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SLC44A4Q53GD3 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.77□□□□□ -1.81
SLC44A4Q53GD3 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
SLC44A4Q53GD3 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
SLC44A4Q53GD3 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.77□□□□□ -1.81
SLC44A4Q53GD3 AL021368.2-201ENST00000606125 5352 ntBASIC3.77□□□□□ -1.81
SLC44A4Q53GD3 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
SLC44A4Q53GD3 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SLC44A4Q53GD3 SNORA38.1-201ENST00000364172 131 ntBASIC3.77□□□□□ -1.81
SLC44A4Q53GD3 RNU1-33P-201ENST00000364249 162 ntBASIC3.77□□□□□ -1.81
SLC44A4Q53GD3 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.77□□□□□ -1.81
SLC44A4Q53GD3 MIR128-1-201ENST00000384921 82 ntBASIC3.77□□□□□ -1.81
SLC44A4Q53GD3 MIR325-201ENST00000385260 98 ntBASIC3.77□□□□□ -1.81
SLC44A4Q53GD3 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.77□□□□□ -1.81
SLC44A4Q53GD3 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.77□□□□□ -1.81
SLC44A4Q53GD3 UBE2D3P2-201ENST00000424409 445 ntBASIC3.77□□□□□ -1.81
SLC44A4Q53GD3 AL353729.1-201ENST00000425044 720 ntBASIC3.77□□□□□ -1.81
SLC44A4Q53GD3 SAR1AP4-201ENST00000429225 591 ntBASIC3.77□□□□□ -1.81
SLC44A4Q53GD3 AL592045.1-201ENST00000429867 352 ntBASIC3.77□□□□□ -1.81
SLC44A4Q53GD3 KCTD9P3-201ENST00000434597 1169 ntBASIC3.77□□□□□ -1.81
SLC44A4Q53GD3 NDUFA5P4-201ENST00000436704 385 ntBASIC3.77□□□□□ -1.81
SLC44A4Q53GD3 AC104058.1-201ENST00000448028 297 ntBASIC3.77□□□□□ -1.81
SLC44A4Q53GD3 RNU6-329P-201ENST00000459618 107 ntBASIC3.77□□□□□ -1.81
SLC44A4Q53GD3 AC008155.2-201ENST00000464337 397 ntBASIC3.77□□□□□ -1.81
SLC44A4Q53GD3 RPL21P99-201ENST00000480369 423 ntBASIC3.77□□□□□ -1.81
SLC44A4Q53GD3 AC096576.1-201ENST00000489014 359 ntBASIC3.77□□□□□ -1.81
SLC44A4Q53GD3 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.77□□□□□ -1.81
SLC44A4Q53GD3 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.77□□□□□ -1.81
SLC44A4Q53GD3 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.77□□□□□ -1.81
SLC44A4Q53GD3 PSMA3P-201ENST00000555485 635 ntBASIC3.77□□□□□ -1.81
SLC44A4Q53GD3 MIR4424-201ENST00000585257 86 ntBASIC3.77□□□□□ -1.81
SLC44A4Q53GD3 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.77□□□□□ -1.81
SLC44A4Q53GD3 RNU6-89P-201ENST00000606519 100 ntBASIC3.77□□□□□ -1.81
SLC44A4Q53GD3 AC006023.2-201ENST00000609916 167 ntBASIC3.77□□□□□ -1.81
SLC44A4Q53GD3 MIR7851-201ENST00000610611 160 ntBASIC3.77□□□□□ -1.81
SLC44A4Q53GD3 AC104237.2-201ENST00000612456 443 ntBASIC3.77□□□□□ -1.81
SLC44A4Q53GD3 AL359547.2-201ENST00000615810 418 ntBASIC3.77□□□□□ -1.81
SLC44A4Q53GD3 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.77□□□□□ -1.81
SLC44A4Q53GD3 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SLC44A4Q53GD3 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SLC44A4Q53GD3 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.76□□□□□ -1.81
SLC44A4Q53GD3 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SLC44A4Q53GD3 AL353746.1-201ENST00000566293 6881 ntBASIC3.76□□□□□ -1.81
SLC44A4Q53GD3 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SLC44A4Q53GD3 AC008568.2-201ENST00000623862 2313 ntBASIC3.76□□□□□ -1.81
SLC44A4Q53GD3 UBE3AP2-201ENST00000429033 2259 ntBASIC3.76□□□□□ -1.81
SLC44A4Q53GD3 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
SLC44A4Q53GD3 RNU6-1167P-201ENST00000363227 94 ntBASIC3.76□□□□□ -1.81
SLC44A4Q53GD3 Y_RNA.231-201ENST00000364358 102 ntBASIC3.76□□□□□ -1.81
SLC44A4Q53GD3 RNU6-831P-201ENST00000384548 107 ntBASIC3.76□□□□□ -1.81
SLC44A4Q53GD3 MIR514A2-201ENST00000385131 88 ntBASIC3.76□□□□□ -1.81
SLC44A4Q53GD3 MIR514A3-201ENST00000385132 88 ntBASIC3.76□□□□□ -1.81
SLC44A4Q53GD3 RNA5SP424-201ENST00000390988 115 ntBASIC3.76□□□□□ -1.81
SLC44A4Q53GD3 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SLC44A4Q53GD3 HSPE1P26-201ENST00000405341 275 ntBASIC3.76□□□□□ -1.81
SLC44A4Q53GD3 MIR1290-201ENST00000408735 78 ntBASIC3.76□□□□□ -1.81
SLC44A4Q53GD3 RNU4-46P-201ENST00000410818 138 ntBASIC3.76□□□□□ -1.81
SLC44A4Q53GD3 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.76□□□□□ -1.81
SLC44A4Q53GD3 AC005326.1-201ENST00000429197 123 ntBASIC3.76□□□□□ -1.81
SLC44A4Q53GD3 PIGFP3-201ENST00000441918 722 ntBASIC3.76□□□□□ -1.81
SLC44A4Q53GD3 NIPA2P5-201ENST00000452282 464 ntBASIC3.76□□□□□ -1.81
SLC44A4Q53GD3 RBMY2UP-201ENST00000453474 324 ntBASIC3.76□□□□□ -1.81
SLC44A4Q53GD3 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.76□□□□□ -1.81
SLC44A4Q53GD3 HMGN2P16-201ENST00000456802 261 ntBASIC3.76□□□□□ -1.81
SLC44A4Q53GD3 PPP1R2P5-201ENST00000457256 603 ntBASIC3.76□□□□□ -1.81
SLC44A4Q53GD3 MTND4P17-201ENST00000470444 350 ntBASIC3.76□□□□□ -1.81
SLC44A4Q53GD3 KC877373.1-201ENST00000479066 408 ntBASIC3.76□□□□□ -1.81
SLC44A4Q53GD3 SUMO2P6-201ENST00000505273 288 ntBASIC3.76□□□□□ -1.81
SLC44A4Q53GD3 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.76□□□□□ -1.81
SLC44A4Q53GD3 RNU1-103P-201ENST00000516502 125 ntBASIC3.76□□□□□ -1.81
SLC44A4Q53GD3 RNU6-914P-201ENST00000516749 109 ntBASIC3.76□□□□□ -1.81
SLC44A4Q53GD3 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms