Protein–RNA interactions for Protein: Q15906

VPS72, Vacuolar protein sorting-associated protein 72 homolog, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72Q15906 AL603758.1-201ENST00000618654 241 ntBASIC4.28□□□□□ -1.72
VPS72Q15906 RMST_9.1-201ENST00000619945 193 ntBASIC4.28□□□□□ -1.72
VPS72Q15906 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
VPS72Q15906 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
VPS72Q15906 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.28□□□□□ -1.72
VPS72Q15906 AC000403.1-201ENST00000613696 3585 ntBASIC4.28□□□□□ -1.72
VPS72Q15906 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.27□□□□□ -1.73
VPS72Q15906 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
VPS72Q15906 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.27□□□□□ -1.73
VPS72Q15906 AL138713.1-201ENST00000624026 2130 ntBASIC4.27□□□□□ -1.73
VPS72Q15906 AL136164.4-201ENST00000625013 2135 ntBASIC4.27□□□□□ -1.73
VPS72Q15906 OR56A5-201ENST00000340110 738 ntBASIC4.27□□□□□ -1.73
VPS72Q15906 Y_RNA.162-201ENST00000363683 102 ntBASIC4.27□□□□□ -1.73
VPS72Q15906 SNORD74.4-201ENST00000364129 80 ntBASIC4.27□□□□□ -1.73
VPS72Q15906 SNORA71.1-201ENST00000364523 117 ntBASIC4.27□□□□□ -1.73
VPS72Q15906 AL590004.1-201ENST00000405321 300 ntBASIC4.27□□□□□ -1.73
VPS72Q15906 RNA5SP184-201ENST00000411071 108 ntBASIC4.27□□□□□ -1.73
VPS72Q15906 RNA5SP39-201ENST00000411245 120 ntBASIC4.27□□□□□ -1.73
VPS72Q15906 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.27□□□□□ -1.73
VPS72Q15906 USP9YP20-201ENST00000419224 558 ntBASIC4.27□□□□□ -1.73
VPS72Q15906 NUP35P1-201ENST00000422734 947 ntBASIC4.27□□□□□ -1.73
VPS72Q15906 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4.27□□□□□ -1.73
VPS72Q15906 UBE2D3P2-201ENST00000424409 445 ntBASIC4.27□□□□□ -1.73
VPS72Q15906 MTCO2P12-201ENST00000427426 682 ntBASIC4.27□□□□□ -1.73
VPS72Q15906 TXNP1-201ENST00000441872 371 ntBASIC4.27□□□□□ -1.73
VPS72Q15906 MTND3P16-201ENST00000452205 344 ntBASIC4.27□□□□□ -1.73
VPS72Q15906 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.27□□□□□ -1.73
VPS72Q15906 MRPS17P3-201ENST00000465453 385 ntBASIC4.27□□□□□ -1.73
VPS72Q15906 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
VPS72Q15906 RPS15AP36-201ENST00000492022 382 ntBASIC4.27□□□□□ -1.73
VPS72Q15906 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
VPS72Q15906 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC4.27□□□□□ -1.73
VPS72Q15906 AC105417.1-201ENST00000514691 285 ntBASIC4.27□□□□□ -1.73
VPS72Q15906 RNU6-390P-201ENST00000516259 103 ntBASIC4.27□□□□□ -1.73
VPS72Q15906 SNORA31.22-201ENST00000517204 135 ntBASIC4.27□□□□□ -1.73
VPS72Q15906 AC011979.2-201ENST00000527568 352 ntBASIC4.27□□□□□ -1.73
VPS72Q15906 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC4.27□□□□□ -1.73
VPS72Q15906 MIR4742-201ENST00000581069 85 ntBASIC4.27□□□□□ -1.73
VPS72Q15906 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC4.27□□□□□ -1.73
VPS72Q15906 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.27□□□□□ -1.73
VPS72Q15906 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.27□□□□□ -1.73
VPS72Q15906 Y_RNA.812-201ENST00000610788 101 ntBASIC4.27□□□□□ -1.73
VPS72Q15906 AC093838.1-201ENST00000613014 469 ntBASIC4.27□□□□□ -1.73
VPS72Q15906 Y_RNA.784-201ENST00000613803 101 ntBASIC4.27□□□□□ -1.73
VPS72Q15906 Y_RNA.787-201ENST00000616522 101 ntBASIC4.27□□□□□ -1.73
VPS72Q15906 Y_RNA.780-201ENST00000617336 101 ntBASIC4.27□□□□□ -1.73
VPS72Q15906 Y_RNA.801-201ENST00000619005 101 ntBASIC4.27□□□□□ -1.73
VPS72Q15906 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.27□□□□□ -1.73
VPS72Q15906 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.27□□□□□ -1.73
VPS72Q15906 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.27□□□□□ -1.73
VPS72Q15906 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
VPS72Q15906 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.27□□□□□ -1.73
VPS72Q15906 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
VPS72Q15906 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
VPS72Q15906 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
VPS72Q15906 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
VPS72Q15906 AC062016.1-201ENST00000355719 319 ntBASIC4.26□□□□□ -1.73
VPS72Q15906 Y_RNA.184-201ENST00000363884 108 ntBASIC4.26□□□□□ -1.73
VPS72Q15906 Y_RNA.231-201ENST00000364358 102 ntBASIC4.26□□□□□ -1.73
VPS72Q15906 U3.11-201ENST00000364476 212 ntBASIC4.26□□□□□ -1.73
VPS72Q15906 Y_RNA.326-201ENST00000365176 113 ntBASIC4.26□□□□□ -1.73
VPS72Q15906 MIR558-201ENST00000384920 94 ntBASIC4.26□□□□□ -1.73
VPS72Q15906 MIR454-201ENST00000390180 115 ntBASIC4.26□□□□□ -1.73
VPS72Q15906 Y_RNA.615-201ENST00000410769 117 ntBASIC4.26□□□□□ -1.73
VPS72Q15906 NDUFB4P5-201ENST00000415445 361 ntBASIC4.26□□□□□ -1.73
VPS72Q15906 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.26□□□□□ -1.73
VPS72Q15906 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.26□□□□□ -1.73
VPS72Q15906 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC4.26□□□□□ -1.73
VPS72Q15906 RNU4-29P-201ENST00000515943 174 ntBASIC4.26□□□□□ -1.73
VPS72Q15906 RNU4-49P-201ENST00000516080 140 ntBASIC4.26□□□□□ -1.73
VPS72Q15906 IGHVII-62-1-201ENST00000519283 235 ntBASIC4.26□□□□□ -1.73
VPS72Q15906 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.26□□□□□ -1.73
VPS72Q15906 AP003072.1-201ENST00000531740 145 ntBASIC4.26□□□□□ -1.73
VPS72Q15906 BNIP3P6-201ENST00000549284 499 ntBASIC4.26□□□□□ -1.73
VPS72Q15906 AC128657.1-201ENST00000549459 145 ntBASIC4.26□□□□□ -1.73
VPS72Q15906 AL360157.1-201ENST00000565962 87 ntBASIC4.26□□□□□ -1.73
VPS72Q15906 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC4.26□□□□□ -1.73
VPS72Q15906 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.26□□□□□ -1.73
VPS72Q15906 AC130324.3-201ENST00000614165 542 ntBASIC4.26□□□□□ -1.73
VPS72Q15906 TUG1_2.1-201ENST00000614234 87 ntBASIC4.26□□□□□ -1.73
VPS72Q15906 USP12-203ENST00000620323 349 ntTSL 3 BASIC4.26□□□□□ -1.73
VPS72Q15906 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC4.26□□□□□ -1.73
VPS72Q15906 MIR622-201ENST00000638396 96 ntBASIC4.26□□□□□ -1.73
VPS72Q15906 AC068647.1-201ENST00000489539 2265 ntBASIC4.26□□□□□ -1.73
VPS72Q15906 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
VPS72Q15906 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.26□□□□□ -1.73
VPS72Q15906 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC4.26□□□□□ -1.73
VPS72Q15906 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
VPS72Q15906 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
VPS72Q15906 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.25□□□□□ -1.73
VPS72Q15906 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
VPS72Q15906 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.25□□□□□ -1.73
VPS72Q15906 RNU4-20P-201ENST00000365601 151 ntBASIC4.25□□□□□ -1.73
VPS72Q15906 Y_RNA.431-201ENST00000384086 102 ntBASIC4.25□□□□□ -1.73
VPS72Q15906 AL109755.1-201ENST00000401791 649 ntBASIC4.25□□□□□ -1.73
VPS72Q15906 U3.42-201ENST00000408746 214 ntBASIC4.25□□□□□ -1.73
VPS72Q15906 RNA5SP104-201ENST00000410989 118 ntBASIC4.25□□□□□ -1.73
VPS72Q15906 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC4.25□□□□□ -1.73
VPS72Q15906 AL645937.1-202ENST00000421799 937 ntBASIC4.25□□□□□ -1.73
VPS72Q15906 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms