Protein–RNA interactions for Protein: Q15393

SF3B3, Splicing factor 3B subunit 3, humanhuman

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3Q15393 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.94□□□□□ -1.78
SF3B3Q15393 AC104237.2-201ENST00000612456 443 ntBASIC3.94□□□□□ -1.78
SF3B3Q15393 AC011155.2-201ENST00000623202 216 ntBASIC3.94□□□□□ -1.78
SF3B3Q15393 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.94□□□□□ -1.78
SF3B3Q15393 AP001350.1-201ENST00000601906 1524 ntBASIC3.94□□□□□ -1.78
SF3B3Q15393 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
SF3B3Q15393 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SF3B3Q15393 RNU6-960P-201ENST00000364056 120 ntBASIC3.93□□□□□ -1.78
SF3B3Q15393 Y_RNA.431-201ENST00000384086 102 ntBASIC3.93□□□□□ -1.78
SF3B3Q15393 AL109755.1-201ENST00000401791 649 ntBASIC3.93□□□□□ -1.78
SF3B3Q15393 HSPE1P1-201ENST00000421494 318 ntBASIC3.93□□□□□ -1.78
SF3B3Q15393 RPL7L1P10-201ENST00000427790 463 ntBASIC3.93□□□□□ -1.78
SF3B3Q15393 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.93□□□□□ -1.78
SF3B3Q15393 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.93□□□□□ -1.78
SF3B3Q15393 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.93□□□□□ -1.78
SF3B3Q15393 AL162395.1-201ENST00000457882 422 ntBASIC3.93□□□□□ -1.78
SF3B3Q15393 HMGN1P10-201ENST00000474557 553 ntBASIC3.93□□□□□ -1.78
SF3B3Q15393 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.93□□□□□ -1.78
SF3B3Q15393 RNU6-1073P-201ENST00000517182 106 ntBASIC3.93□□□□□ -1.78
SF3B3Q15393 RPL7P20-201ENST00000520308 745 ntBASIC3.93□□□□□ -1.78
SF3B3Q15393 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.93□□□□□ -1.78
SF3B3Q15393 AP003385.6-201ENST00000531603 374 ntBASIC3.93□□□□□ -1.78
SF3B3Q15393 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.93□□□□□ -1.78
SF3B3Q15393 AC026464.5-201ENST00000562497 722 ntBASIC3.93□□□□□ -1.78
SF3B3Q15393 AC012443.1-201ENST00000605605 231 ntBASIC3.93□□□□□ -1.78
SF3B3Q15393 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.93□□□□□ -1.78
SF3B3Q15393 PART1_1.1-201ENST00000611761 217 ntBASIC3.93□□□□□ -1.78
SF3B3Q15393 uc_338.25-201ENST00000613756 156 ntBASIC3.93□□□□□ -1.78
SF3B3Q15393 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
SF3B3Q15393 uc_338.11-201ENST00000619132 160 ntBASIC3.93□□□□□ -1.78
SF3B3Q15393 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.93□□□□□ -1.78
SF3B3Q15393 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SF3B3Q15393 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.93□□□□□ -1.78
SF3B3Q15393 AC244517.1-201ENST00000606030 2086 ntBASIC3.93□□□□□ -1.78
SF3B3Q15393 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SF3B3Q15393 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SF3B3Q15393 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SF3B3Q15393 MTCO1P9-201ENST00000505577 1534 ntBASIC3.92□□□□□ -1.78
SF3B3Q15393 AC116096.1-201ENST00000566804 2314 ntBASIC3.92□□□□□ -1.78
SF3B3Q15393 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.92□□□□□ -1.78
SF3B3Q15393 RNU6-179P-201ENST00000363350 107 ntBASIC3.92□□□□□ -1.78
SF3B3Q15393 RNU6-188P-201ENST00000364207 107 ntBASIC3.92□□□□□ -1.78
SF3B3Q15393 Y_RNA.326-201ENST00000365176 113 ntBASIC3.92□□□□□ -1.78
SF3B3Q15393 RNU6-692P-201ENST00000384496 107 ntBASIC3.92□□□□□ -1.78
SF3B3Q15393 OR6C66P-201ENST00000414917 930 ntBASIC3.92□□□□□ -1.78
SF3B3Q15393 AC114491.1-201ENST00000416095 246 ntBASIC3.92□□□□□ -1.78
SF3B3Q15393 AL451054.2-201ENST00000420896 202 ntBASIC3.92□□□□□ -1.78
SF3B3Q15393 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.92□□□□□ -1.78
SF3B3Q15393 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.92□□□□□ -1.78
SF3B3Q15393 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.92□□□□□ -1.78
SF3B3Q15393 SNORD97-201ENST00000459187 142 ntBASIC3.92□□□□□ -1.78
SF3B3Q15393 Y_RNA.632-201ENST00000459189 102 ntBASIC3.92□□□□□ -1.78
SF3B3Q15393 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.92□□□□□ -1.78
SF3B3Q15393 RNU6-1092P-201ENST00000516955 87 ntBASIC3.92□□□□□ -1.78
SF3B3Q15393 AC100870.1-201ENST00000522035 505 ntBASIC3.92□□□□□ -1.78
SF3B3Q15393 AP004371.1-201ENST00000525240 214 ntBASIC3.92□□□□□ -1.78
SF3B3Q15393 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.92□□□□□ -1.78
SF3B3Q15393 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.92□□□□□ -1.78
SF3B3Q15393 AL118558.2-201ENST00000556294 238 ntBASIC3.92□□□□□ -1.78
SF3B3Q15393 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.92□□□□□ -1.78
SF3B3Q15393 AL031176.1-201ENST00000604554 466 ntBASIC3.92□□□□□ -1.78
SF3B3Q15393 AL133255.1-201ENST00000606374 441 ntBASIC3.92□□□□□ -1.78
SF3B3Q15393 Y_RNA.812-201ENST00000610788 101 ntBASIC3.92□□□□□ -1.78
SF3B3Q15393 Y_RNA.784-201ENST00000613803 101 ntBASIC3.92□□□□□ -1.78
SF3B3Q15393 Y_RNA.787-201ENST00000616522 101 ntBASIC3.92□□□□□ -1.78
SF3B3Q15393 Y_RNA.780-201ENST00000617336 101 ntBASIC3.92□□□□□ -1.78
SF3B3Q15393 Y_RNA.801-201ENST00000619005 101 ntBASIC3.92□□□□□ -1.78
SF3B3Q15393 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.92□□□□□ -1.78
SF3B3Q15393 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.92□□□□□ -1.78
SF3B3Q15393 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.92□□□□□ -1.78
SF3B3Q15393 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SF3B3Q15393 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SF3B3Q15393 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SF3B3Q15393 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
SF3B3Q15393 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
SF3B3Q15393 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.91□□□□□ -1.78
SF3B3Q15393 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.91□□□□□ -1.78
SF3B3Q15393 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.91□□□□□ -1.78
SF3B3Q15393 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.91□□□□□ -1.78
SF3B3Q15393 SNORD115-7-201ENST00000365306 82 ntBASIC3.91□□□□□ -1.78
SF3B3Q15393 RNU6-61P-201ENST00000365528 109 ntBASIC3.91□□□□□ -1.78
SF3B3Q15393 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
SF3B3Q15393 SNORA24.1-201ENST00000384401 135 ntBASIC3.91□□□□□ -1.78
SF3B3Q15393 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.91□□□□□ -1.78
SF3B3Q15393 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.91□□□□□ -1.78
SF3B3Q15393 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.91□□□□□ -1.78
SF3B3Q15393 AF228730.4-201ENST00000421457 183 ntBASIC3.91□□□□□ -1.78
SF3B3Q15393 MTCO2P12-201ENST00000427426 682 ntBASIC3.91□□□□□ -1.78
SF3B3Q15393 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.91□□□□□ -1.78
SF3B3Q15393 PPP1R2P5-201ENST00000457256 603 ntBASIC3.91□□□□□ -1.78
SF3B3Q15393 RPS15AP36-201ENST00000492022 382 ntBASIC3.91□□□□□ -1.78
SF3B3Q15393 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.91□□□□□ -1.78
SF3B3Q15393 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.91□□□□□ -1.78
SF3B3Q15393 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.91□□□□□ -1.78
SF3B3Q15393 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.91□□□□□ -1.78
SF3B3Q15393 AL022345.1-201ENST00000607292 135 ntBASIC3.91□□□□□ -1.78
SF3B3Q15393 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.91□□□□□ -1.78
SF3B3Q15393 AC025034.2-201ENST00000623264 286 ntBASIC3.91□□□□□ -1.78
SF3B3Q15393 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.91□□□□□ -1.78
SF3B3Q15393 AL133216.2-202ENST00000634512 349 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms