Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PCDH1Q08174 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PCDH1Q08174 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.5□□□□□ -1.69
PCDH1Q08174 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.5□□□□□ -1.69
PCDH1Q08174 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
PCDH1Q08174 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PCDH1Q08174 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC4.49□□□□□ -1.69
PCDH1Q08174 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
PCDH1Q08174 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.49□□□□□ -1.69
PCDH1Q08174 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.49□□□□□ -1.69
PCDH1Q08174 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.49□□□□□ -1.69
PCDH1Q08174 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PCDH1Q08174 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
PCDH1Q08174 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PCDH1Q08174 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PCDH1Q08174 RNU6-78P-201ENST00000362897 107 ntBASIC4.49□□□□□ -1.69
PCDH1Q08174 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PCDH1Q08174 RNU6-886P-201ENST00000384319 105 ntBASIC4.49□□□□□ -1.69
PCDH1Q08174 MIR124-3-201ENST00000384866 87 ntBASIC4.49□□□□□ -1.69
PCDH1Q08174 AL079342.1-201ENST00000401460 267 ntBASIC4.49□□□□□ -1.69
PCDH1Q08174 RNU2-68P-201ENST00000410878 191 ntBASIC4.49□□□□□ -1.69
PCDH1Q08174 TOMM22P1-201ENST00000418578 312 ntBASIC4.49□□□□□ -1.69
PCDH1Q08174 RPL17P36-201ENST00000420302 549 ntBASIC4.49□□□□□ -1.69
PCDH1Q08174 AC016831.4-201ENST00000438302 307 ntBASIC4.49□□□□□ -1.69
PCDH1Q08174 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.49□□□□□ -1.69
PCDH1Q08174 snoU109.2-201ENST00000459316 135 ntBASIC4.49□□□□□ -1.69
PCDH1Q08174 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.49□□□□□ -1.69
PCDH1Q08174 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC4.49□□□□□ -1.69
PCDH1Q08174 AC026784.1-201ENST00000507986 352 ntBASIC4.49□□□□□ -1.69
PCDH1Q08174 SNORA31.18-201ENST00000517043 134 ntBASIC4.49□□□□□ -1.69
PCDH1Q08174 AC010186.2-204ENST00000537668 439 ntBASIC4.49□□□□□ -1.69
PCDH1Q08174 AP001880.2-201ENST00000538233 448 ntBASIC4.49□□□□□ -1.69
PCDH1Q08174 AC090617.3-201ENST00000573670 475 ntBASIC4.49□□□□□ -1.69
PCDH1Q08174 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.49□□□□□ -1.69
PCDH1Q08174 AC240442.1-201ENST00000616055 283 ntBASIC4.49□□□□□ -1.69
PCDH1Q08174 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PCDH1Q08174 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.49□□□□□ -1.69
PCDH1Q08174 BMS1P21-201ENST00000634565 365 ntBASIC4.49□□□□□ -1.69
PCDH1Q08174 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.49□□□□□ -1.69
PCDH1Q08174 AC018529.3-201ENST00000624212 2254 ntBASIC4.49□□□□□ -1.69
PCDH1Q08174 AC025031.4-201ENST00000621248 3271 ntBASIC4.49□□□□□ -1.69
PCDH1Q08174 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.49□□□□□ -1.69
PCDH1Q08174 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.49□□□□□ -1.69
PCDH1Q08174 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PCDH1Q08174 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.49□□□□□ -1.69
PCDH1Q08174 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
PCDH1Q08174 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.49□□□□□ -1.69
PCDH1Q08174 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
PCDH1Q08174 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
PCDH1Q08174 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PCDH1Q08174 MAPK10-320ENST00000641462 6696 ntBASIC4.48□□□□□ -1.69
PCDH1Q08174 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
PCDH1Q08174 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.48□□□□□ -1.69
PCDH1Q08174 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.48□□□□□ -1.69
PCDH1Q08174 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PCDH1Q08174 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PCDH1Q08174 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PCDH1Q08174 RNA5SP191-201ENST00000362585 102 ntBASIC4.48□□□□□ -1.69
PCDH1Q08174 RNA5SP372-201ENST00000390836 115 ntBASIC4.48□□□□□ -1.69
PCDH1Q08174 SNORD78.2-201ENST00000391076 69 ntBASIC4.48□□□□□ -1.69
PCDH1Q08174 BTF3L4P2-201ENST00000392798 346 ntBASIC4.48□□□□□ -1.69
PCDH1Q08174 AC009237.10-201ENST00000414112 510 ntBASIC4.48□□□□□ -1.69
PCDH1Q08174 AC098614.2-201ENST00000426040 255 ntBASIC4.48□□□□□ -1.69
PCDH1Q08174 AL590383.1-201ENST00000428602 75 ntBASIC4.48□□□□□ -1.69
PCDH1Q08174 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.48□□□□□ -1.69
PCDH1Q08174 SCARNA10-201ENST00000459255 330 ntBASIC4.48□□□□□ -1.69
PCDH1Q08174 TOMM22P6-201ENST00000465035 409 ntBASIC4.48□□□□□ -1.69
PCDH1Q08174 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC4.48□□□□□ -1.69
PCDH1Q08174 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.48□□□□□ -1.69
PCDH1Q08174 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.48□□□□□ -1.69
PCDH1Q08174 AC010265.1-201ENST00000513509 211 ntBASIC4.48□□□□□ -1.69
PCDH1Q08174 RNU6-1012P-201ENST00000516606 109 ntBASIC4.48□□□□□ -1.69
PCDH1Q08174 SCARNA24.2-201ENST00000516968 130 ntBASIC4.48□□□□□ -1.69
PCDH1Q08174 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.48□□□□□ -1.69
PCDH1Q08174 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.48□□□□□ -1.69
PCDH1Q08174 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.48□□□□□ -1.69
PCDH1Q08174 AC027309.3-201ENST00000623419 351 ntBASIC4.48□□□□□ -1.69
PCDH1Q08174 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.48□□□□□ -1.69
PCDH1Q08174 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
PCDH1Q08174 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.48□□□□□ -1.69
PCDH1Q08174 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PCDH1Q08174 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
PCDH1Q08174 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
PCDH1Q08174 RNU4-9P-201ENST00000364951 139 ntBASIC4.47□□□□□ -1.69
PCDH1Q08174 RNU6-72P-201ENST00000384285 79 ntBASIC4.47□□□□□ -1.69
PCDH1Q08174 SNORD96B-201ENST00000386148 79 ntBASIC4.47□□□□□ -1.69
PCDH1Q08174 MIR1298-201ENST00000408783 112 ntBASIC4.47□□□□□ -1.69
PCDH1Q08174 RNU2-20P-201ENST00000410425 191 ntBASIC4.47□□□□□ -1.69
PCDH1Q08174 Y_RNA.602-201ENST00000410535 92 ntBASIC4.47□□□□□ -1.69
PCDH1Q08174 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.47□□□□□ -1.69
PCDH1Q08174 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.47□□□□□ -1.69
PCDH1Q08174 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC4.47□□□□□ -1.69
PCDH1Q08174 AL445305.1-201ENST00000432577 575 ntBASIC4.47□□□□□ -1.69
PCDH1Q08174 snoU13.30-201ENST00000458951 104 ntBASIC4.47□□□□□ -1.69
PCDH1Q08174 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.47□□□□□ -1.69
PCDH1Q08174 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.47□□□□□ -1.69
PCDH1Q08174 AC073657.2-201ENST00000605661 303 ntBASIC4.47□□□□□ -1.69
PCDH1Q08174 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.47□□□□□ -1.69
PCDH1Q08174 AC100827.5-201ENST00000615883 426 ntBASIC4.47□□□□□ -1.69
PCDH1Q08174 AC005086.4-201ENST00000623065 213 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms