Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 AL035410.1-201ENST00000427409 427 ntBASIC0.32□□□□□ -2.36
TFF3Q07654 FGF7P5-201ENST00000441829 291 ntBASIC0.32□□□□□ -2.36
TFF3Q07654 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.32□□□□□ -2.36
TFF3Q07654 AL590365.1-201ENST00000450788 243 ntBASIC0.32□□□□□ -2.36
TFF3Q07654 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC0.32□□□□□ -2.36
TFF3Q07654 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC0.32□□□□□ -2.36
TFF3Q07654 RPL31P3-201ENST00000458430 332 ntBASIC0.32□□□□□ -2.36
TFF3Q07654 HMGN2P9-201ENST00000476875 229 ntBASIC0.32□□□□□ -2.36
TFF3Q07654 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC0.32□□□□□ -2.36
TFF3Q07654 RNA5SP404-201ENST00000517118 132 ntBASIC0.32□□□□□ -2.36
TFF3Q07654 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.32□□□□□ -2.36
TFF3Q07654 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC0.32□□□□□ -2.36
TFF3Q07654 OR8K4P-201ENST00000534608 872 ntBASIC0.32□□□□□ -2.36
TFF3Q07654 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.32□□□□□ -2.36
TFF3Q07654 VN1R81P-201ENST00000602085 372 ntBASIC0.32□□□□□ -2.36
TFF3Q07654 AL355810.1-201ENST00000614629 552 ntBASIC0.32□□□□□ -2.36
TFF3Q07654 U4atac.1-201ENST00000618345 95 ntBASIC0.32□□□□□ -2.36
TFF3Q07654 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC0.32□□□□□ -2.36
TFF3Q07654 MTCO1P23-201ENST00000415223 1526 ntBASIC0.32□□□□□ -2.36
TFF3Q07654 PCF11-AS1-201ENST00000602322 1516 ntBASIC0.32□□□□□ -2.36
TFF3Q07654 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC0.31□□□□□ -2.36
TFF3Q07654 Y_RNA.178-201ENST00000363832 102 ntBASIC0.31□□□□□ -2.36
TFF3Q07654 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
TFF3Q07654 AL117342.1-201ENST00000404861 406 ntBASIC0.31□□□□□ -2.36
TFF3Q07654 RNU2-21P-201ENST00000410368 188 ntBASIC0.31□□□□□ -2.36
TFF3Q07654 EIF4EP2-201ENST00000422816 654 ntBASIC0.31□□□□□ -2.36
TFF3Q07654 NDUFB4P7-201ENST00000423198 363 ntBASIC0.31□□□□□ -2.36
TFF3Q07654 AC244023.1-201ENST00000426884 112 ntBASIC0.31□□□□□ -2.36
TFF3Q07654 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.31□□□□□ -2.36
TFF3Q07654 AL354941.1-201ENST00000438600 464 ntBASIC0.31□□□□□ -2.36
TFF3Q07654 MTND6P13-201ENST00000443510 523 ntBASIC0.31□□□□□ -2.36
TFF3Q07654 MTCYBP3-201ENST00000445588 1137 ntBASIC0.31□□□□□ -2.36
TFF3Q07654 PRELID3BP1-201ENST00000457142 540 ntBASIC0.31□□□□□ -2.36
TFF3Q07654 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC0.31□□□□□ -2.36
TFF3Q07654 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
TFF3Q07654 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
TFF3Q07654 AC108078.1-201ENST00000508073 725 ntBASIC0.31□□□□□ -2.36
TFF3Q07654 SNORA31.8-201ENST00000516327 108 ntBASIC0.31□□□□□ -2.36
TFF3Q07654 RNU6-902P-201ENST00000517212 91 ntBASIC0.31□□□□□ -2.36
TFF3Q07654 AP003717.3-201ENST00000544832 1180 ntBASIC0.31□□□□□ -2.36
TFF3Q07654 AC074051.3-201ENST00000570238 358 ntBASIC0.31□□□□□ -2.36
TFF3Q07654 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC0.31□□□□□ -2.36
TFF3Q07654 VN1R82P-201ENST00000601481 356 ntBASIC0.31□□□□□ -2.36
TFF3Q07654 AC242498.1-201ENST00000604134 111 ntBASIC0.31□□□□□ -2.36
TFF3Q07654 AC243994.1-201ENST00000618627 109 ntBASIC0.31□□□□□ -2.36
TFF3Q07654 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC0.31□□□□□ -2.36
TFF3Q07654 RBBP8P1-201ENST00000449447 1844 ntBASIC0.31□□□□□ -2.36
TFF3Q07654 MTND4P16-201ENST00000466108 1367 ntBASIC0.31□□□□□ -2.36
TFF3Q07654 SNORA63.3-201ENST00000362682 132 ntBASIC0.3□□□□□ -2.36
TFF3Q07654 RNU1-124P-201ENST00000363861 145 ntBASIC0.3□□□□□ -2.36
TFF3Q07654 RNU6-1164P-201ENST00000364428 107 ntBASIC0.3□□□□□ -2.36
TFF3Q07654 RNU2-64P-201ENST00000411315 191 ntBASIC0.3□□□□□ -2.36
TFF3Q07654 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.3□□□□□ -2.36
TFF3Q07654 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.3□□□□□ -2.36
TFF3Q07654 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.3□□□□□ -2.36
TFF3Q07654 CST2P1-201ENST00000425770 87 ntBASIC0.3□□□□□ -2.36
TFF3Q07654 DUXAP8-207ENST00000456786 622 ntBASIC0.3□□□□□ -2.36
TFF3Q07654 RPS27P22-201ENST00000478056 241 ntBASIC0.3□□□□□ -2.36
TFF3Q07654 RPL30P7-201ENST00000479312 323 ntBASIC0.3□□□□□ -2.36
TFF3Q07654 RNU11-2P-201ENST00000516898 142 ntBASIC0.3□□□□□ -2.36
TFF3Q07654 NAP1L1P1-201ENST00000524793 1063 ntBASIC0.3□□□□□ -2.36
TFF3Q07654 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.3□□□□□ -2.36
TFF3Q07654 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.3□□□□□ -2.36
TFF3Q07654 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.3□□□□□ -2.36
TFF3Q07654 AC010186.2-204ENST00000537668 439 ntBASIC0.3□□□□□ -2.36
TFF3Q07654 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.3□□□□□ -2.36
TFF3Q07654 AL133241.1-201ENST00000556832 487 ntBASIC0.3□□□□□ -2.36
TFF3Q07654 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.3□□□□□ -2.36
TFF3Q07654 MIR4661-201ENST00000582720 75 ntBASIC0.3□□□□□ -2.36
TFF3Q07654 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.3□□□□□ -2.36
TFF3Q07654 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC0.29□□□□□ -2.36
TFF3Q07654 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
TFF3Q07654 AC138393.1-203ENST00000327086 343 ntBASIC0.29□□□□□ -2.36
TFF3Q07654 RNU5D-1-201ENST00000363299 116 ntBASIC0.29□□□□□ -2.36
TFF3Q07654 U3.13-201ENST00000364804 214 ntBASIC0.29□□□□□ -2.36
TFF3Q07654 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
TFF3Q07654 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
TFF3Q07654 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
TFF3Q07654 AL031577.2-201ENST00000404133 280 ntBASIC0.29□□□□□ -2.36
TFF3Q07654 RPS15AP40-201ENST00000419621 391 ntBASIC0.29□□□□□ -2.36
TFF3Q07654 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.29□□□□□ -2.36
TFF3Q07654 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC0.29□□□□□ -2.36
TFF3Q07654 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC0.29□□□□□ -2.36
TFF3Q07654 MTND4P6-201ENST00000438297 472 ntBASIC0.29□□□□□ -2.36
TFF3Q07654 AL133373.1-201ENST00000497098 94 ntBASIC0.29□□□□□ -2.36
TFF3Q07654 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.29□□□□□ -2.36
TFF3Q07654 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC0.29□□□□□ -2.36
TFF3Q07654 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.29□□□□□ -2.36
TFF3Q07654 SNORA62.5-201ENST00000516634 120 ntBASIC0.29□□□□□ -2.36
TFF3Q07654 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.29□□□□□ -2.36
TFF3Q07654 RAB11AP2-201ENST00000545905 639 ntBASIC0.29□□□□□ -2.36
TFF3Q07654 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.29□□□□□ -2.36
TFF3Q07654 AL360181.4-201ENST00000621752 134 ntBASIC0.29□□□□□ -2.36
TFF3Q07654 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.29□□□□□ -2.36
TFF3Q07654 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
TFF3Q07654 AC073544.1-201ENST00000600110 1595 ntBASIC0.28□□□□□ -2.36
TFF3Q07654 SNORD18A-201ENST00000363753 72 ntBASIC0.28□□□□□ -2.36
TFF3Q07654 RNA5SP125-201ENST00000364843 120 ntBASIC0.28□□□□□ -2.36
TFF3Q07654 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC0.28□□□□□ -2.36
TFF3Q07654 Y_RNA.433-201ENST00000384089 102 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms