Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.66□□□□□ -1.98
LMO4P61968 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.66□□□□□ -1.98
LMO4P61968 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
LMO4P61968 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.65□□□□□ -1.98
LMO4P61968 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.98
LMO4P61968 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
LMO4P61968 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.65□□□□□ -1.98
LMO4P61968 RNU6-552P-201ENST00000362869 119 ntBASIC2.65□□□□□ -1.99
LMO4P61968 Y_RNA.111-201ENST00000363248 100 ntBASIC2.65□□□□□ -1.99
LMO4P61968 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
LMO4P61968 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.65□□□□□ -1.99
LMO4P61968 Y_RNA.431-201ENST00000384086 102 ntBASIC2.65□□□□□ -1.99
LMO4P61968 RNU6-831P-201ENST00000384548 107 ntBASIC2.65□□□□□ -1.99
LMO4P61968 AL138878.1-201ENST00000405131 347 ntBASIC2.65□□□□□ -1.99
LMO4P61968 RN7SKP140-201ENST00000411196 284 ntBASIC2.65□□□□□ -1.99
LMO4P61968 NCOR1P3-201ENST00000420479 303 ntBASIC2.65□□□□□ -1.99
LMO4P61968 AL159169.1-201ENST00000421119 127 ntBASIC2.65□□□□□ -1.99
LMO4P61968 TMEM167AP1-201ENST00000423409 219 ntBASIC2.65□□□□□ -1.99
LMO4P61968 UBE2D3P2-201ENST00000424409 445 ntBASIC2.65□□□□□ -1.99
LMO4P61968 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.65□□□□□ -1.99
LMO4P61968 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.65□□□□□ -1.99
LMO4P61968 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.65□□□□□ -1.99
LMO4P61968 MTND4P19-201ENST00000446659 478 ntBASIC2.65□□□□□ -1.99
LMO4P61968 MTND1P18-201ENST00000448191 573 ntBASIC2.65□□□□□ -1.99
LMO4P61968 MTND1P9-201ENST00000453775 944 ntBASIC2.65□□□□□ -1.99
LMO4P61968 AL590639.1-201ENST00000456484 337 ntBASIC2.65□□□□□ -1.99
LMO4P61968 RNA5SP310-201ENST00000459084 116 ntBASIC2.65□□□□□ -1.99
LMO4P61968 RNU6-329P-201ENST00000459618 107 ntBASIC2.65□□□□□ -1.99
LMO4P61968 AC007547.1-201ENST00000462177 490 ntBASIC2.65□□□□□ -1.99
LMO4P61968 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.65□□□□□ -1.99
LMO4P61968 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.65□□□□□ -1.99
LMO4P61968 AC021205.2-201ENST00000480069 347 ntBASIC2.65□□□□□ -1.99
LMO4P61968 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
LMO4P61968 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.65□□□□□ -1.99
LMO4P61968 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
LMO4P61968 AC092436.1-201ENST00000506450 503 ntBASIC2.65□□□□□ -1.99
LMO4P61968 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC2.65□□□□□ -1.99
LMO4P61968 TTC39CP1-201ENST00000512513 755 ntBASIC2.65□□□□□ -1.99
LMO4P61968 SNORA70.16-201ENST00000516390 95 ntBASIC2.65□□□□□ -1.99
LMO4P61968 HMGB1P41-201ENST00000520234 440 ntBASIC2.65□□□□□ -1.99
LMO4P61968 AC011979.2-201ENST00000527568 352 ntBASIC2.65□□□□□ -1.99
LMO4P61968 AP005639.2-201ENST00000527592 928 ntBASIC2.65□□□□□ -1.99
LMO4P61968 AL133271.1-201ENST00000538229 291 ntBASIC2.65□□□□□ -1.99
LMO4P61968 AL163153.1-201ENST00000554223 283 ntBASIC2.65□□□□□ -1.99
LMO4P61968 AL133153.1-201ENST00000557756 303 ntBASIC2.65□□□□□ -1.99
LMO4P61968 MIR3921-201ENST00000577308 85 ntBASIC2.65□□□□□ -1.99
LMO4P61968 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.65□□□□□ -1.99
LMO4P61968 AL365204.3-201ENST00000612448 685 ntBASIC2.65□□□□□ -1.99
LMO4P61968 AL450472.3-201ENST00000615578 367 ntBASIC2.65□□□□□ -1.99
LMO4P61968 CUL1P1-201ENST00000509510 2425 ntBASIC2.65□□□□□ -1.99
LMO4P61968 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
LMO4P61968 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
LMO4P61968 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC2.64□□□□□ -1.99
LMO4P61968 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.64□□□□□ -1.99
LMO4P61968 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
LMO4P61968 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.64□□□□□ -1.99
LMO4P61968 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
LMO4P61968 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.64□□□□□ -1.99
LMO4P61968 HSPE1P11-201ENST00000339579 310 ntBASIC2.64□□□□□ -1.99
LMO4P61968 RNU5A-1-201ENST00000362698 116 ntBASIC2.64□□□□□ -1.99
LMO4P61968 Y_RNA.132-201ENST00000363421 102 ntBASIC2.64□□□□□ -1.99
LMO4P61968 RNU6-522P-201ENST00000364497 107 ntBASIC2.64□□□□□ -1.99
LMO4P61968 RNU6-641P-201ENST00000384006 107 ntBASIC2.64□□□□□ -1.99
LMO4P61968 RNU6-38P-201ENST00000384085 107 ntBASIC2.64□□□□□ -1.99
LMO4P61968 RNU6-903P-201ENST00000391270 109 ntBASIC2.64□□□□□ -1.99
LMO4P61968 AL138885.1-201ENST00000405921 675 ntBASIC2.64□□□□□ -1.99
LMO4P61968 U3.42-201ENST00000408746 214 ntBASIC2.64□□□□□ -1.99
LMO4P61968 RHEBP3-201ENST00000411920 351 ntBASIC2.64□□□□□ -1.99
LMO4P61968 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.64□□□□□ -1.99
LMO4P61968 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.64□□□□□ -1.99
LMO4P61968 HSPE1P1-201ENST00000421494 318 ntBASIC2.64□□□□□ -1.99
LMO4P61968 RPL7L1P10-201ENST00000427790 463 ntBASIC2.64□□□□□ -1.99
LMO4P61968 OR2AS1P-201ENST00000427827 319 ntBASIC2.64□□□□□ -1.99
LMO4P61968 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.64□□□□□ -1.99
LMO4P61968 RNU7-59P-201ENST00000459101 61 ntBASIC2.64□□□□□ -1.99
LMO4P61968 RNU6-333P-201ENST00000459117 107 ntBASIC2.64□□□□□ -1.99
LMO4P61968 AP001486.1-201ENST00000463339 476 ntBASIC2.64□□□□□ -1.99
LMO4P61968 MTND4P17-201ENST00000470444 350 ntBASIC2.64□□□□□ -1.99
LMO4P61968 AC126389.1-201ENST00000477436 290 ntBASIC2.64□□□□□ -1.99
LMO4P61968 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
LMO4P61968 AC116562.3-201ENST00000506136 177 ntBASIC2.64□□□□□ -1.99
LMO4P61968 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.64□□□□□ -1.99
LMO4P61968 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.64□□□□□ -1.99
LMO4P61968 RNU7-51P-201ENST00000516560 62 ntBASIC2.64□□□□□ -1.99
LMO4P61968 RPL7P20-201ENST00000520308 745 ntBASIC2.64□□□□□ -1.99
LMO4P61968 AC068587.5-201ENST00000528506 175 ntBASIC2.64□□□□□ -1.99
LMO4P61968 AP000857.1-201ENST00000532151 543 ntBASIC2.64□□□□□ -1.99
LMO4P61968 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.64□□□□□ -1.99
LMO4P61968 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.64□□□□□ -1.99
LMO4P61968 TGIF1P1-201ENST00000558095 802 ntBASIC2.64□□□□□ -1.99
LMO4P61968 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.64□□□□□ -1.99
LMO4P61968 AC026464.5-201ENST00000562497 722 ntBASIC2.64□□□□□ -1.99
LMO4P61968 MIR4775-201ENST00000581168 75 ntBASIC2.64□□□□□ -1.99
LMO4P61968 UBL5P2-201ENST00000583788 219 ntBASIC2.64□□□□□ -1.99
LMO4P61968 AL451007.1-201ENST00000595491 289 ntBASIC2.64□□□□□ -1.99
LMO4P61968 AC113139.1-201ENST00000605049 239 ntBASIC2.64□□□□□ -1.99
LMO4P61968 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.64□□□□□ -1.99
LMO4P61968 AC004908.2-201ENST00000609090 574 ntBASIC2.64□□□□□ -1.99
LMO4P61968 AC009570.1-201ENST00000609599 745 ntBASIC2.64□□□□□ -1.99
LMO4P61968 AC104237.2-201ENST00000612456 443 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 154.4 ms