Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 Y_RNA.144-201ENST00000363521 113 ntBASIC3.58□□□□□ -1.84
CLRN1P58418 SNORA56-201ENST00000383966 129 ntBASIC3.58□□□□□ -1.84
CLRN1P58418 RNU6-1105P-201ENST00000384774 107 ntBASIC3.58□□□□□ -1.84
CLRN1P58418 MIR10A-201ENST00000385043 110 ntBASIC3.58□□□□□ -1.84
CLRN1P58418 MIR325-201ENST00000385260 98 ntBASIC3.58□□□□□ -1.84
CLRN1P58418 RNU2-68P-201ENST00000410878 191 ntBASIC3.58□□□□□ -1.84
CLRN1P58418 AL160275.2-201ENST00000412010 394 ntBASIC3.58□□□□□ -1.84
CLRN1P58418 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.58□□□□□ -1.84
CLRN1P58418 AC008267.5-201ENST00000424928 265 ntBASIC3.58□□□□□ -1.84
CLRN1P58418 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.58□□□□□ -1.84
CLRN1P58418 RSL24D1P6-201ENST00000426934 401 ntBASIC3.58□□□□□ -1.84
CLRN1P58418 AC093151.1-201ENST00000427711 313 ntBASIC3.58□□□□□ -1.84
CLRN1P58418 AC006946.1-201ENST00000429106 328 ntBASIC3.58□□□□□ -1.84
CLRN1P58418 AC087650.1-201ENST00000431445 468 ntBASIC3.58□□□□□ -1.84
CLRN1P58418 AL627311.1-201ENST00000431514 115 ntBASIC3.58□□□□□ -1.84
CLRN1P58418 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.58□□□□□ -1.84
CLRN1P58418 Z82210.1-201ENST00000440037 231 ntBASIC3.58□□□□□ -1.84
CLRN1P58418 GSTA11P-201ENST00000452866 669 ntBASIC3.58□□□□□ -1.84
CLRN1P58418 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC3.58□□□□□ -1.84
CLRN1P58418 RPL12P25-201ENST00000455592 494 ntBASIC3.58□□□□□ -1.84
CLRN1P58418 RN7SL860P-201ENST00000473738 223 ntBASIC3.58□□□□□ -1.84
CLRN1P58418 AL135752.1-201ENST00000479477 471 ntBASIC3.58□□□□□ -1.84
CLRN1P58418 SNORA31.19-201ENST00000517079 126 ntBASIC3.58□□□□□ -1.84
CLRN1P58418 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CLRN1P58418 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.58□□□□□ -1.84
CLRN1P58418 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
CLRN1P58418 AC010653.1-201ENST00000571108 881 ntBASIC3.58□□□□□ -1.84
CLRN1P58418 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.58□□□□□ -1.84
CLRN1P58418 AC025946.2-201ENST00000603398 234 ntBASIC3.58□□□□□ -1.84
CLRN1P58418 AC023043.4-201ENST00000612081 449 ntBASIC3.58□□□□□ -1.84
CLRN1P58418 MIR7151-201ENST00000617477 60 ntBASIC3.58□□□□□ -1.84
CLRN1P58418 AC103858.2-201ENST00000621471 543 ntBASIC3.58□□□□□ -1.84
CLRN1P58418 AC138627.2-201ENST00000624202 601 ntBASIC3.58□□□□□ -1.84
CLRN1P58418 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.58□□□□□ -1.84
CLRN1P58418 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CLRN1P58418 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CLRN1P58418 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
CLRN1P58418 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CLRN1P58418 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CLRN1P58418 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.58□□□□□ -1.84
CLRN1P58418 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.58□□□□□ -1.84
CLRN1P58418 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CLRN1P58418 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CLRN1P58418 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CLRN1P58418 SNORA31-201ENST00000362607 130 ntBASIC3.57□□□□□ -1.84
CLRN1P58418 Y_RNA.133-201ENST00000363428 110 ntBASIC3.57□□□□□ -1.84
CLRN1P58418 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
CLRN1P58418 SNORA41-201ENST00000384675 132 ntBASIC3.57□□□□□ -1.84
CLRN1P58418 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CLRN1P58418 SNORA40C-201ENST00000391285 128 ntBASIC3.57□□□□□ -1.84
CLRN1P58418 RPS26P8-201ENST00000393490 348 ntBASIC3.57□□□□□ -1.84
CLRN1P58418 RNU6-985P-201ENST00000410182 104 ntBASIC3.57□□□□□ -1.84
CLRN1P58418 AC096664.2-201ENST00000411843 406 ntBASIC3.57□□□□□ -1.84
CLRN1P58418 SNORD56-201ENST00000413522 71 ntBASIC3.57□□□□□ -1.84
CLRN1P58418 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.57□□□□□ -1.84
CLRN1P58418 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.57□□□□□ -1.84
CLRN1P58418 AL358176.2-201ENST00000425769 204 ntBASIC3.57□□□□□ -1.84
CLRN1P58418 AC007560.1-201ENST00000426912 237 ntBASIC3.57□□□□□ -1.84
CLRN1P58418 AL158071.1-201ENST00000430315 461 ntBASIC3.57□□□□□ -1.84
CLRN1P58418 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.57□□□□□ -1.84
CLRN1P58418 AL031274.1-201ENST00000450334 232 ntBASIC3.57□□□□□ -1.84
CLRN1P58418 AC010618.1-201ENST00000469924 477 ntBASIC3.57□□□□□ -1.84
CLRN1P58418 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.57□□□□□ -1.84
CLRN1P58418 AC023141.12-201ENST00000512399 199 ntBASIC3.57□□□□□ -1.84
CLRN1P58418 RNU6-572P-201ENST00000516724 80 ntBASIC3.57□□□□□ -1.84
CLRN1P58418 RNU6-264P-201ENST00000517134 104 ntBASIC3.57□□□□□ -1.84
CLRN1P58418 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.57□□□□□ -1.84
CLRN1P58418 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CLRN1P58418 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CLRN1P58418 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.57□□□□□ -1.84
CLRN1P58418 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.57□□□□□ -1.84
CLRN1P58418 HSPE1P5-201ENST00000561489 272 ntBASIC3.57□□□□□ -1.84
CLRN1P58418 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CLRN1P58418 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.57□□□□□ -1.84
CLRN1P58418 AL359693.1-201ENST00000614959 2407 ntBASIC3.57□□□□□ -1.84
CLRN1P58418 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.57□□□□□ -1.84
CLRN1P58418 Z69720.2-201ENST00000624755 279 ntBASIC3.57□□□□□ -1.84
CLRN1P58418 AL078596.1-201ENST00000624856 447 ntBASIC3.57□□□□□ -1.84
CLRN1P58418 MAPK10-373ENST00000641983 6772 ntBASIC3.57□□□□□ -1.84
CLRN1P58418 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.57□□□□□ -1.84
CLRN1P58418 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
CLRN1P58418 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CLRN1P58418 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CLRN1P58418 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.56□□□□□ -1.84
CLRN1P58418 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CLRN1P58418 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.56□□□□□ -1.84
CLRN1P58418 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.56□□□□□ -1.84
CLRN1P58418 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CLRN1P58418 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLRN1P58418 RNU6-1309P-201ENST00000363305 108 ntBASIC3.56□□□□□ -1.84
CLRN1P58418 Y_RNA.428-201ENST00000384078 102 ntBASIC3.56□□□□□ -1.84
CLRN1P58418 RNU6-166P-201ENST00000384371 107 ntBASIC3.56□□□□□ -1.84
CLRN1P58418 RNU6-1197P-201ENST00000391183 107 ntBASIC3.56□□□□□ -1.84
CLRN1P58418 RNU6-174P-201ENST00000410406 106 ntBASIC3.56□□□□□ -1.84
CLRN1P58418 BX276092.3-201ENST00000424182 230 ntBASIC3.56□□□□□ -1.84
CLRN1P58418 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.56□□□□□ -1.84
CLRN1P58418 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.56□□□□□ -1.84
CLRN1P58418 SNRPEP9-201ENST00000436794 238 ntBASIC3.56□□□□□ -1.84
CLRN1P58418 DAP3P1-201ENST00000441522 278 ntBASIC3.56□□□□□ -1.84
CLRN1P58418 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 133.5 ms