Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.31□□□□□ -1.88
HDAC4P56524 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HDAC4P56524 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
HDAC4P56524 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.3□□□□□ -1.88
HDAC4P56524 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HDAC4P56524 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
HDAC4P56524 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
HDAC4P56524 Y_RNA.38-201ENST00000362617 102 ntBASIC3.3□□□□□ -1.88
HDAC4P56524 RNU6-1322P-201ENST00000364309 107 ntBASIC3.3□□□□□ -1.88
HDAC4P56524 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HDAC4P56524 RNU6-190P-201ENST00000384154 102 ntBASIC3.3□□□□□ -1.88
HDAC4P56524 MIR128-1-201ENST00000384921 82 ntBASIC3.3□□□□□ -1.88
HDAC4P56524 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
HDAC4P56524 MIR887-201ENST00000401258 79 ntBASIC3.3□□□□□ -1.88
HDAC4P56524 AL122016.1-201ENST00000403365 367 ntBASIC3.3□□□□□ -1.88
HDAC4P56524 RNU2-33P-201ENST00000410344 192 ntBASIC3.3□□□□□ -1.88
HDAC4P56524 OR51A5P-201ENST00000415429 942 ntBASIC3.3□□□□□ -1.88
HDAC4P56524 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.3□□□□□ -1.88
HDAC4P56524 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.3□□□□□ -1.88
HDAC4P56524 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.3□□□□□ -1.88
HDAC4P56524 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.3□□□□□ -1.88
HDAC4P56524 RNU6-953P-201ENST00000459154 107 ntBASIC3.3□□□□□ -1.88
HDAC4P56524 AC087588.1-201ENST00000462203 316 ntBASIC3.3□□□□□ -1.88
HDAC4P56524 AC104472.2-201ENST00000469035 601 ntBASIC3.3□□□□□ -1.88
HDAC4P56524 RPS29P25-201ENST00000481709 171 ntBASIC3.3□□□□□ -1.88
HDAC4P56524 RPL36AP51-201ENST00000487216 318 ntBASIC3.3□□□□□ -1.88
HDAC4P56524 AC069439.1-201ENST00000494739 167 ntBASIC3.3□□□□□ -1.88
HDAC4P56524 AC092436.1-201ENST00000506450 503 ntBASIC3.3□□□□□ -1.88
HDAC4P56524 RNU6-677P-201ENST00000516914 101 ntBASIC3.3□□□□□ -1.88
HDAC4P56524 AC245166.1-201ENST00000521012 253 ntBASIC3.3□□□□□ -1.88
HDAC4P56524 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.3□□□□□ -1.88
HDAC4P56524 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.3□□□□□ -1.88
HDAC4P56524 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.3□□□□□ -1.88
HDAC4P56524 HMGB1P14-201ENST00000557424 591 ntBASIC3.3□□□□□ -1.88
HDAC4P56524 MIR5680-201ENST00000577577 84 ntBASIC3.3□□□□□ -1.88
HDAC4P56524 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.3□□□□□ -1.88
HDAC4P56524 AC104763.2-201ENST00000604179 382 ntBASIC3.3□□□□□ -1.88
HDAC4P56524 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.3□□□□□ -1.88
HDAC4P56524 AL365204.3-201ENST00000612448 685 ntBASIC3.3□□□□□ -1.88
HDAC4P56524 AP001486.3-201ENST00000615334 372 ntBASIC3.3□□□□□ -1.88
HDAC4P56524 AC011155.2-201ENST00000623202 216 ntBASIC3.3□□□□□ -1.88
HDAC4P56524 AC007785.2-201ENST00000598627 1916 ntBASIC3.3□□□□□ -1.88
HDAC4P56524 AC006020.1-201ENST00000420179 1854 ntBASIC3.3□□□□□ -1.88
HDAC4P56524 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.3□□□□□ -1.88
HDAC4P56524 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.29□□□□□ -1.88
HDAC4P56524 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HDAC4P56524 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.29□□□□□ -1.88
HDAC4P56524 RNU6-179P-201ENST00000363350 107 ntBASIC3.29□□□□□ -1.88
HDAC4P56524 SNORA62.1-201ENST00000364287 154 ntBASIC3.29□□□□□ -1.88
HDAC4P56524 RNU6-534P-201ENST00000364877 106 ntBASIC3.29□□□□□ -1.88
HDAC4P56524 MIR1277-201ENST00000408536 78 ntBASIC3.29□□□□□ -1.88
HDAC4P56524 AC092809.3-201ENST00000415453 231 ntBASIC3.29□□□□□ -1.88
HDAC4P56524 AC007919.1-201ENST00000429380 217 ntBASIC3.29□□□□□ -1.88
HDAC4P56524 MTND1P2-201ENST00000430604 821 ntBASIC3.29□□□□□ -1.88
HDAC4P56524 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.29□□□□□ -1.88
HDAC4P56524 BNIP3P2-201ENST00000441221 577 ntBASIC3.29□□□□□ -1.88
HDAC4P56524 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.29□□□□□ -1.88
HDAC4P56524 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.29□□□□□ -1.88
HDAC4P56524 AL162395.1-201ENST00000457882 422 ntBASIC3.29□□□□□ -1.88
HDAC4P56524 RPS29P15-201ENST00000458329 171 ntBASIC3.29□□□□□ -1.88
HDAC4P56524 AC006512.1-201ENST00000468816 291 ntBASIC3.29□□□□□ -1.88
HDAC4P56524 AC109925.1-201ENST00000478069 331 ntBASIC3.29□□□□□ -1.88
HDAC4P56524 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.29□□□□□ -1.88
HDAC4P56524 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.29□□□□□ -1.88
HDAC4P56524 RNA5SP217-201ENST00000515959 91 ntBASIC3.29□□□□□ -1.88
HDAC4P56524 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.29□□□□□ -1.88
HDAC4P56524 AC109635.3-201ENST00000529536 185 ntBASIC3.29□□□□□ -1.88
HDAC4P56524 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.29□□□□□ -1.88
HDAC4P56524 TRAV28-201ENST00000557548 323 ntBASIC3.29□□□□□ -1.88
HDAC4P56524 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.29□□□□□ -1.88
HDAC4P56524 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.29□□□□□ -1.88
HDAC4P56524 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.29□□□□□ -1.88
HDAC4P56524 RBM11P1-201ENST00000604951 799 ntBASIC3.29□□□□□ -1.88
HDAC4P56524 AC008536.2-201ENST00000607284 349 ntBASIC3.29□□□□□ -1.88
HDAC4P56524 AC034102.8-201ENST00000615146 484 ntBASIC3.29□□□□□ -1.88
HDAC4P56524 AP003122.6-201ENST00000623831 495 ntBASIC3.29□□□□□ -1.88
HDAC4P56524 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.29□□□□□ -1.88
HDAC4P56524 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.29□□□□□ -1.88
HDAC4P56524 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.29□□□□□ -1.88
HDAC4P56524 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.29□□□□□ -1.88
HDAC4P56524 MTND5P17-201ENST00000418405 1603 ntBASIC3.29□□□□□ -1.88
HDAC4P56524 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
HDAC4P56524 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HDAC4P56524 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
HDAC4P56524 Y_RNA.89-201ENST00000363031 102 ntBASIC3.28□□□□□ -1.88
HDAC4P56524 SNORD115-7-201ENST00000365306 82 ntBASIC3.28□□□□□ -1.88
HDAC4P56524 SNORA69-201ENST00000383895 132 ntBASIC3.28□□□□□ -1.88
HDAC4P56524 SNORA7.4-201ENST00000384249 137 ntBASIC3.28□□□□□ -1.88
HDAC4P56524 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HDAC4P56524 RNA5SP344-201ENST00000411081 104 ntBASIC3.28□□□□□ -1.88
HDAC4P56524 RPL32P35-201ENST00000415214 394 ntBASIC3.28□□□□□ -1.88
HDAC4P56524 BTF3L4P3-201ENST00000418879 476 ntBASIC3.28□□□□□ -1.88
HDAC4P56524 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.28□□□□□ -1.88
HDAC4P56524 GTF2IP20-201ENST00000431663 360 ntBASIC3.28□□□□□ -1.88
HDAC4P56524 Z82210.1-201ENST00000440037 231 ntBASIC3.28□□□□□ -1.88
HDAC4P56524 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.28□□□□□ -1.88
HDAC4P56524 PIGFP3-201ENST00000441918 722 ntBASIC3.28□□□□□ -1.88
HDAC4P56524 RPS12P18-201ENST00000442381 270 ntBASIC3.28□□□□□ -1.88
HDAC4P56524 DDX3P2-201ENST00000446138 111 ntBASIC3.28□□□□□ -1.88
HDAC4P56524 AL118520.1-201ENST00000450770 291 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms