Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AL670379.12-201ENST00000605291 253 ntBASIC2.2□□□□□ -2.06
PKNOX1P55347 AL670379.8-201ENST00000605353 252 ntBASIC2.2□□□□□ -2.06
PKNOX1P55347 AL670379.7-201ENST00000605823 252 ntBASIC2.2□□□□□ -2.06
PKNOX1P55347 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.2□□□□□ -2.06
PKNOX1P55347 AC004223.4-201ENST00000612426 332 ntBASIC2.2□□□□□ -2.06
PKNOX1P55347 AL589994.2-201ENST00000621124 579 ntBASIC2.2□□□□□ -2.06
PKNOX1P55347 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.2□□□□□ -2.06
PKNOX1P55347 CU459211.1-201ENST00000635667 749 ntBASIC2.2□□□□□ -2.06
PKNOX1P55347 MIR3199-2-201ENST00000636243 86 ntBASIC2.2□□□□□ -2.06
PKNOX1P55347 AC010149.2-201ENST00000637608 315 ntBASIC2.2□□□□□ -2.06
PKNOX1P55347 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.2□□□□□ -2.06
PKNOX1P55347 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
PKNOX1P55347 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
PKNOX1P55347 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
PKNOX1P55347 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
PKNOX1P55347 SNORA5B-201ENST00000363786 132 ntBASIC2.19□□□□□ -2.06
PKNOX1P55347 SNORA6-201ENST00000384033 151 ntBASIC2.19□□□□□ -2.06
PKNOX1P55347 MTCYBP36-201ENST00000404146 440 ntBASIC2.19□□□□□ -2.06
PKNOX1P55347 RPS12P24-201ENST00000412619 387 ntBASIC2.19□□□□□ -2.06
PKNOX1P55347 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.19□□□□□ -2.06
PKNOX1P55347 MICF-203ENST00000432679 129 ntBASIC2.19□□□□□ -2.06
PKNOX1P55347 AC018634.1-201ENST00000437554 401 ntBASIC2.19□□□□□ -2.06
PKNOX1P55347 RPL22P17-201ENST00000438729 315 ntBASIC2.19□□□□□ -2.06
PKNOX1P55347 PGBD4P3-201ENST00000440731 581 ntBASIC2.19□□□□□ -2.06
PKNOX1P55347 EPS15P1-201ENST00000448836 336 ntBASIC2.19□□□□□ -2.06
PKNOX1P55347 SSXP1-201ENST00000453640 473 ntBASIC2.19□□□□□ -2.06
PKNOX1P55347 AL139109.1-201ENST00000455491 297 ntBASIC2.19□□□□□ -2.06
PKNOX1P55347 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.19□□□□□ -2.06
PKNOX1P55347 SNORD97-201ENST00000459187 142 ntBASIC2.19□□□□□ -2.06
PKNOX1P55347 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.19□□□□□ -2.06
PKNOX1P55347 RPL39P36-201ENST00000490784 156 ntBASIC2.19□□□□□ -2.06
PKNOX1P55347 AC112204.1-201ENST00000502591 103 ntBASIC2.19□□□□□ -2.06
PKNOX1P55347 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.19□□□□□ -2.06
PKNOX1P55347 AF131216.2-201ENST00000512316 564 ntBASIC2.19□□□□□ -2.06
PKNOX1P55347 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.19□□□□□ -2.06
PKNOX1P55347 AC009902.1-201ENST00000519351 183 ntBASIC2.19□□□□□ -2.06
PKNOX1P55347 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.19□□□□□ -2.06
PKNOX1P55347 BTF3P12-201ENST00000519620 469 ntBASIC2.19□□□□□ -2.06
PKNOX1P55347 AP003122.3-201ENST00000526316 255 ntBASIC2.19□□□□□ -2.06
PKNOX1P55347 AC084851.1-201ENST00000529105 249 ntBASIC2.19□□□□□ -2.06
PKNOX1P55347 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.19□□□□□ -2.06
PKNOX1P55347 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.19□□□□□ -2.06
PKNOX1P55347 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.19□□□□□ -2.06
PKNOX1P55347 AC234778.2-201ENST00000566241 354 ntBASIC2.19□□□□□ -2.06
PKNOX1P55347 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.19□□□□□ -2.06
PKNOX1P55347 AL353778.1-201ENST00000603149 408 ntBASIC2.19□□□□□ -2.06
PKNOX1P55347 AC008121.1-201ENST00000603244 268 ntBASIC2.19□□□□□ -2.06
PKNOX1P55347 CLPTM1LP1-201ENST00000604519 484 ntBASIC2.19□□□□□ -2.06
PKNOX1P55347 AC093424.1-201ENST00000604999 338 ntBASIC2.19□□□□□ -2.06
PKNOX1P55347 AC121334.2-201ENST00000605387 271 ntBASIC2.19□□□□□ -2.06
PKNOX1P55347 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.19□□□□□ -2.06
PKNOX1P55347 MIR7844-201ENST00000616161 122 ntBASIC2.19□□□□□ -2.06
PKNOX1P55347 MTND5P42-201ENST00000637720 498 ntBASIC2.19□□□□□ -2.06
PKNOX1P55347 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.19□□□□□ -2.06
PKNOX1P55347 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.19□□□□□ -2.06
PKNOX1P55347 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.18□□□□□ -2.06
PKNOX1P55347 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.18□□□□□ -2.06
PKNOX1P55347 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.18□□□□□ -2.06
PKNOX1P55347 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
PKNOX1P55347 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
PKNOX1P55347 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
PKNOX1P55347 Z98749.2-208ENST00000381646 500 ntBASIC2.18□□□□□ -2.06
PKNOX1P55347 MIR483-201ENST00000385070 76 ntBASIC2.18□□□□□ -2.06
PKNOX1P55347 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
PKNOX1P55347 RPS4XP8-201ENST00000402039 771 ntBASIC2.18□□□□□ -2.06
PKNOX1P55347 SNORA11.1-201ENST00000408133 129 ntBASIC2.18□□□□□ -2.06
PKNOX1P55347 OR51A5P-201ENST00000415429 942 ntBASIC2.18□□□□□ -2.06
PKNOX1P55347 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC2.18□□□□□ -2.06
PKNOX1P55347 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.18□□□□□ -2.06
PKNOX1P55347 MTCO3P30-201ENST00000426425 670 ntBASIC2.18□□□□□ -2.06
PKNOX1P55347 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.18□□□□□ -2.06
PKNOX1P55347 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.18□□□□□ -2.06
PKNOX1P55347 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.18□□□□□ -2.06
PKNOX1P55347 MTND4P25-201ENST00000441039 533 ntBASIC2.18□□□□□ -2.06
PKNOX1P55347 EEF1B2P7-201ENST00000451177 676 ntBASIC2.18□□□□□ -2.06
PKNOX1P55347 ZNF114P1-201ENST00000453500 292 ntBASIC2.18□□□□□ -2.06
PKNOX1P55347 MTND1P12-201ENST00000455231 147 ntBASIC2.18□□□□□ -2.06
PKNOX1P55347 RNU7-26P-201ENST00000458980 63 ntBASIC2.18□□□□□ -2.06
PKNOX1P55347 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.18□□□□□ -2.06
PKNOX1P55347 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.18□□□□□ -2.06
PKNOX1P55347 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.18□□□□□ -2.06
PKNOX1P55347 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.18□□□□□ -2.06
PKNOX1P55347 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.18□□□□□ -2.06
PKNOX1P55347 RNU6-1092P-201ENST00000516955 87 ntBASIC2.18□□□□□ -2.06
PKNOX1P55347 ZNF321P-202ENST00000550843 495 ntBASIC2.18□□□□□ -2.06
PKNOX1P55347 AC007151.1-201ENST00000572774 483 ntBASIC2.18□□□□□ -2.06
PKNOX1P55347 AC091152.3-201ENST00000604227 325 ntBASIC2.18□□□□□ -2.06
PKNOX1P55347 AL355816.2-201ENST00000610049 647 ntBASIC2.18□□□□□ -2.06
PKNOX1P55347 MIR6840-201ENST00000611937 71 ntBASIC2.18□□□□□ -2.06
PKNOX1P55347 AL365204.3-201ENST00000612448 685 ntBASIC2.18□□□□□ -2.06
PKNOX1P55347 AC245884.12-201ENST00000615364 59 ntBASIC2.18□□□□□ -2.06
PKNOX1P55347 AC092140.2-201ENST00000618027 521 ntBASIC2.18□□□□□ -2.06
PKNOX1P55347 AC009831.4-201ENST00000620744 325 ntBASIC2.18□□□□□ -2.06
PKNOX1P55347 AP002791.1-201ENST00000623291 381 ntBASIC2.18□□□□□ -2.06
PKNOX1P55347 MIR7157-201ENST00000635801 60 ntBASIC2.18□□□□□ -2.06
PKNOX1P55347 Z99571.1-201ENST00000636677 394 ntBASIC2.18□□□□□ -2.06
PKNOX1P55347 AP000553.5-201ENST00000641933 54 ntBASIC2.18□□□□□ -2.06
PKNOX1P55347 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.18□□□□□ -2.06
PKNOX1P55347 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.18□□□□□ -2.06
PKNOX1P55347 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 148.2 ms