Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 RN7SKP263-201ENST00000411194 309 ntBASIC2.85□□□□□ -1.95
HOXA1P49639 BX682237.1-201ENST00000415016 335 ntBASIC2.85□□□□□ -1.95
HOXA1P49639 AC063979.1-201ENST00000415539 377 ntBASIC2.85□□□□□ -1.95
HOXA1P49639 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.85□□□□□ -1.95
HOXA1P49639 AL645937.1-202ENST00000421799 937 ntBASIC2.85□□□□□ -1.95
HOXA1P49639 AL513185.2-201ENST00000425543 193 ntBASIC2.85□□□□□ -1.95
HOXA1P49639 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.85□□□□□ -1.95
HOXA1P49639 TAAR7P-201ENST00000436141 242 ntBASIC2.85□□□□□ -1.95
HOXA1P49639 NDUFB4P6-201ENST00000436819 366 ntBASIC2.85□□□□□ -1.95
HOXA1P49639 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.85□□□□□ -1.95
HOXA1P49639 AL357552.1-201ENST00000445254 415 ntBASIC2.85□□□□□ -1.95
HOXA1P49639 AC009237.8-201ENST00000445492 379 ntBASIC2.85□□□□□ -1.95
HOXA1P49639 DYNLL1P5-201ENST00000467158 270 ntBASIC2.85□□□□□ -1.95
HOXA1P49639 FPGT-203ENST00000467578 601 ntTSL 2 BASIC2.85□□□□□ -1.95
HOXA1P49639 RPS20P22-201ENST00000473700 357 ntBASIC2.85□□□□□ -1.95
HOXA1P49639 AL135752.1-201ENST00000479477 471 ntBASIC2.85□□□□□ -1.95
HOXA1P49639 AC068587.1-201ENST00000483613 781 ntBASIC2.85□□□□□ -1.95
HOXA1P49639 AC046134.1-201ENST00000514454 666 ntBASIC2.85□□□□□ -1.95
HOXA1P49639 RNU4-49P-201ENST00000516080 140 ntBASIC2.85□□□□□ -1.95
HOXA1P49639 RNU6-273P-201ENST00000516937 96 ntBASIC2.85□□□□□ -1.95
HOXA1P49639 RNA5SP290-201ENST00000517133 127 ntBASIC2.85□□□□□ -1.95
HOXA1P49639 AC107934.2-201ENST00000518653 310 ntBASIC2.85□□□□□ -1.95
HOXA1P49639 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.85□□□□□ -1.95
HOXA1P49639 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.85□□□□□ -1.95
HOXA1P49639 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.85□□□□□ -1.95
HOXA1P49639 AC243972.3-201ENST00000539655 198 ntBASIC2.85□□□□□ -1.95
HOXA1P49639 ARL6IP1P1-201ENST00000545836 610 ntBASIC2.85□□□□□ -1.95
HOXA1P49639 MIR4697-201ENST00000582977 78 ntBASIC2.85□□□□□ -1.95
HOXA1P49639 UBE2V2P2-201ENST00000587677 504 ntBASIC2.85□□□□□ -1.95
HOXA1P49639 AC093227.2-201ENST00000589357 285 ntBASIC2.85□□□□□ -1.95
HOXA1P49639 BNIP3P25-201ENST00000596023 559 ntBASIC2.85□□□□□ -1.95
HOXA1P49639 AC073539.2-201ENST00000597113 165 ntBASIC2.85□□□□□ -1.95
HOXA1P49639 AC092747.3-201ENST00000603769 301 ntBASIC2.85□□□□□ -1.95
HOXA1P49639 AL359198.2-201ENST00000611836 194 ntBASIC2.85□□□□□ -1.95
HOXA1P49639 AL110115.1-201ENST00000614396 364 ntBASIC2.85□□□□□ -1.95
HOXA1P49639 AL354798.1-201ENST00000622505 329 ntBASIC2.85□□□□□ -1.95
HOXA1P49639 AC073476.4-201ENST00000628409 72 ntBASIC2.85□□□□□ -1.95
HOXA1P49639 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.85□□□□□ -1.95
HOXA1P49639 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC2.85□□□□□ -1.95
HOXA1P49639 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
HOXA1P49639 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.85□□□□□ -1.95
HOXA1P49639 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
HOXA1P49639 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.85□□□□□ -1.95
HOXA1P49639 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.84□□□□□ -1.95
HOXA1P49639 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
HOXA1P49639 SNORD3E-201ENST00000362899 217 ntBASIC2.84□□□□□ -1.95
HOXA1P49639 RNU6-767P-201ENST00000384132 107 ntBASIC2.84□□□□□ -1.95
HOXA1P49639 RNU6-831P-201ENST00000384548 107 ntBASIC2.84□□□□□ -1.95
HOXA1P49639 RNU6-1197P-201ENST00000391183 107 ntBASIC2.84□□□□□ -1.95
HOXA1P49639 RNU2-33P-201ENST00000410344 192 ntBASIC2.84□□□□□ -1.95
HOXA1P49639 AC080125.1-201ENST00000414888 684 ntBASIC2.84□□□□□ -1.95
HOXA1P49639 RPL21P90-201ENST00000415692 466 ntBASIC2.84□□□□□ -1.95
HOXA1P49639 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC2.84□□□□□ -1.95
HOXA1P49639 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.84□□□□□ -1.95
HOXA1P49639 RNU6-1208P-201ENST00000459588 107 ntBASIC2.84□□□□□ -1.95
HOXA1P49639 AC087588.1-201ENST00000462203 316 ntBASIC2.84□□□□□ -1.95
HOXA1P49639 AC087884.1-201ENST00000469738 328 ntBASIC2.84□□□□□ -1.95
HOXA1P49639 RN7SL594P-201ENST00000470590 287 ntBASIC2.84□□□□□ -1.95
HOXA1P49639 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.84□□□□□ -1.95
HOXA1P49639 RN7SKP13-201ENST00000515933 244 ntBASIC2.84□□□□□ -1.95
HOXA1P49639 AP001804.3-201ENST00000525146 880 ntBASIC2.84□□□□□ -1.95
HOXA1P49639 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC2.84□□□□□ -1.95
HOXA1P49639 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.84□□□□□ -1.95
HOXA1P49639 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC2.84□□□□□ -1.95
HOXA1P49639 AC106782.4-201ENST00000568264 210 ntBASIC2.84□□□□□ -1.95
HOXA1P49639 MTCO3P13-201ENST00000577757 781 ntBASIC2.84□□□□□ -1.95
HOXA1P49639 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.84□□□□□ -1.95
HOXA1P49639 MIR5187-201ENST00000583479 76 ntBASIC2.84□□□□□ -1.95
HOXA1P49639 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.84□□□□□ -1.95
HOXA1P49639 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.84□□□□□ -1.95
HOXA1P49639 AC012119.1-201ENST00000603184 222 ntBASIC2.84□□□□□ -1.95
HOXA1P49639 AC174048.1-201ENST00000603389 144 ntBASIC2.84□□□□□ -1.95
HOXA1P49639 AC021646.1-201ENST00000605469 484 ntBASIC2.84□□□□□ -1.95
HOXA1P49639 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.84□□□□□ -1.95
HOXA1P49639 AL121757.2-201ENST00000611223 313 ntBASIC2.84□□□□□ -1.95
HOXA1P49639 MIR6875-201ENST00000617506 72 ntBASIC2.84□□□□□ -1.95
HOXA1P49639 uc_338.11-201ENST00000619132 160 ntBASIC2.84□□□□□ -1.95
HOXA1P49639 SNORD39.4-201ENST00000620099 78 ntBASIC2.84□□□□□ -1.95
HOXA1P49639 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
HOXA1P49639 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
HOXA1P49639 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
HOXA1P49639 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
HOXA1P49639 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
HOXA1P49639 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
HOXA1P49639 RNU6-845P-201ENST00000362578 103 ntBASIC2.83□□□□□ -1.96
HOXA1P49639 Y_RNA.72-201ENST00000362894 103 ntBASIC2.83□□□□□ -1.96
HOXA1P49639 U3.6-201ENST00000363622 211 ntBASIC2.83□□□□□ -1.96
HOXA1P49639 Y_RNA.245-201ENST00000364493 95 ntBASIC2.83□□□□□ -1.96
HOXA1P49639 SNORD81.2-201ENST00000365153 76 ntBASIC2.83□□□□□ -1.96
HOXA1P49639 RNU6-393P-201ENST00000384475 107 ntBASIC2.83□□□□□ -1.96
HOXA1P49639 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.83□□□□□ -1.96
HOXA1P49639 POLHP1-201ENST00000411806 470 ntBASIC2.83□□□□□ -1.96
HOXA1P49639 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC2.83□□□□□ -1.96
HOXA1P49639 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.83□□□□□ -1.96
HOXA1P49639 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC2.83□□□□□ -1.96
HOXA1P49639 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.83□□□□□ -1.96
HOXA1P49639 RPL35AP12-201ENST00000425362 338 ntBASIC2.83□□□□□ -1.96
HOXA1P49639 SAR1AP4-201ENST00000429225 591 ntBASIC2.83□□□□□ -1.96
HOXA1P49639 AL356867.1-201ENST00000429623 299 ntBASIC2.83□□□□□ -1.96
HOXA1P49639 GPM6BP2-201ENST00000432046 144 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms