Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.85□□□□□ -1.95
LHX1P48742 MTND3P5-201ENST00000512798 333 ntBASIC2.85□□□□□ -1.95
LHX1P48742 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.85□□□□□ -1.95
LHX1P48742 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.85□□□□□ -1.95
LHX1P48742 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.85□□□□□ -1.95
LHX1P48742 AC068587.5-201ENST00000528506 175 ntBASIC2.85□□□□□ -1.95
LHX1P48742 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
LHX1P48742 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.85□□□□□ -1.95
LHX1P48742 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.85□□□□□ -1.95
LHX1P48742 AC010653.1-201ENST00000571108 881 ntBASIC2.85□□□□□ -1.95
LHX1P48742 AC087683.1-201ENST00000591187 441 ntBASIC2.85□□□□□ -1.95
LHX1P48742 DUSP12P1-201ENST00000612874 516 ntBASIC2.85□□□□□ -1.95
LHX1P48742 AC138649.3-201ENST00000622154 254 ntBASIC2.85□□□□□ -1.95
LHX1P48742 Z99571.1-201ENST00000636677 394 ntBASIC2.85□□□□□ -1.95
LHX1P48742 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
LHX1P48742 ASNSP3-201ENST00000451989 1306 ntBASIC2.85□□□□□ -1.95
LHX1P48742 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
LHX1P48742 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.85□□□□□ -1.95
LHX1P48742 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.84□□□□□ -1.95
LHX1P48742 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
LHX1P48742 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
LHX1P48742 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.84□□□□□ -1.95
LHX1P48742 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
LHX1P48742 RNU6-181P-201ENST00000363225 107 ntBASIC2.84□□□□□ -1.95
LHX1P48742 RNU6-179P-201ENST00000363350 107 ntBASIC2.84□□□□□ -1.95
LHX1P48742 RNU6-1097P-201ENST00000363586 107 ntBASIC2.84□□□□□ -1.95
LHX1P48742 RNA5SP139-201ENST00000364340 117 ntBASIC2.84□□□□□ -1.95
LHX1P48742 RNU4-24P-201ENST00000364565 139 ntBASIC2.84□□□□□ -1.95
LHX1P48742 U8.9-201ENST00000365667 134 ntBASIC2.84□□□□□ -1.95
LHX1P48742 RNU6-456P-201ENST00000384493 107 ntBASIC2.84□□□□□ -1.95
LHX1P48742 MIR34A-201ENST00000385130 110 ntBASIC2.84□□□□□ -1.95
LHX1P48742 SNORA26.7-201ENST00000391288 122 ntBASIC2.84□□□□□ -1.95
LHX1P48742 AC080125.1-201ENST00000414888 684 ntBASIC2.84□□□□□ -1.95
LHX1P48742 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.84□□□□□ -1.95
LHX1P48742 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.84□□□□□ -1.95
LHX1P48742 ARL5AP4-201ENST00000430731 512 ntBASIC2.84□□□□□ -1.95
LHX1P48742 AC236972.1-201ENST00000433225 199 ntBASIC2.84□□□□□ -1.95
LHX1P48742 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.84□□□□□ -1.95
LHX1P48742 MTATP6P16-201ENST00000434543 526 ntBASIC2.84□□□□□ -1.95
LHX1P48742 RPL21P2-201ENST00000440049 481 ntBASIC2.84□□□□□ -1.95
LHX1P48742 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.84□□□□□ -1.95
LHX1P48742 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.84□□□□□ -1.95
LHX1P48742 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.84□□□□□ -1.95
LHX1P48742 MRPS17P3-201ENST00000465453 385 ntBASIC2.84□□□□□ -1.95
LHX1P48742 RPS15AP34-201ENST00000487776 387 ntBASIC2.84□□□□□ -1.95
LHX1P48742 AC114786.4-201ENST00000508771 728 ntBASIC2.84□□□□□ -1.95
LHX1P48742 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.84□□□□□ -1.95
LHX1P48742 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.84□□□□□ -1.95
LHX1P48742 RNU6-914P-201ENST00000516749 109 ntBASIC2.84□□□□□ -1.95
LHX1P48742 RNU6-445P-201ENST00000516949 107 ntBASIC2.84□□□□□ -1.95
LHX1P48742 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
LHX1P48742 AP000889.1-201ENST00000530968 660 ntBASIC2.84□□□□□ -1.95
LHX1P48742 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.84□□□□□ -1.95
LHX1P48742 AL359212.1-201ENST00000556608 614 ntBASIC2.84□□□□□ -1.95
LHX1P48742 MTND1P15-201ENST00000579262 949 ntBASIC2.84□□□□□ -1.95
LHX1P48742 AC024619.4-201ENST00000580924 316 ntBASIC2.84□□□□□ -1.95
LHX1P48742 HMGN2P15-201ENST00000585707 270 ntBASIC2.84□□□□□ -1.95
LHX1P48742 Z84480.1-201ENST00000605131 311 ntBASIC2.84□□□□□ -1.95
LHX1P48742 AL158032.1-201ENST00000605401 106 ntBASIC2.84□□□□□ -1.95
LHX1P48742 AL139286.2-201ENST00000606838 396 ntBASIC2.84□□□□□ -1.95
LHX1P48742 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.84□□□□□ -1.95
LHX1P48742 AL359547.2-201ENST00000615810 418 ntBASIC2.84□□□□□ -1.95
LHX1P48742 AC092608.2-201ENST00000624427 218 ntBASIC2.84□□□□□ -1.95
LHX1P48742 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
LHX1P48742 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.84□□□□□ -1.96
LHX1P48742 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.84□□□□□ -1.96
LHX1P48742 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.84□□□□□ -1.96
LHX1P48742 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.84□□□□□ -1.96
LHX1P48742 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.83□□□□□ -1.96
LHX1P48742 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.83□□□□□ -1.96
LHX1P48742 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
LHX1P48742 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.83□□□□□ -1.96
LHX1P48742 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
LHX1P48742 Y_RNA.194-201ENST00000363985 102 ntBASIC2.83□□□□□ -1.96
LHX1P48742 Y_RNA.367-201ENST00000365544 101 ntBASIC2.83□□□□□ -1.96
LHX1P48742 Y_RNA.436-201ENST00000384097 102 ntBASIC2.83□□□□□ -1.96
LHX1P48742 Y_RNA.559-201ENST00000384686 107 ntBASIC2.83□□□□□ -1.96
LHX1P48742 MIR301A-201ENST00000385261 86 ntBASIC2.83□□□□□ -1.96
LHX1P48742 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.83□□□□□ -1.96
LHX1P48742 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.83□□□□□ -1.96
LHX1P48742 AL356057.3-201ENST00000402607 340 ntBASIC2.83□□□□□ -1.96
LHX1P48742 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
LHX1P48742 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.83□□□□□ -1.96
LHX1P48742 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.83□□□□□ -1.96
LHX1P48742 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.83□□□□□ -1.96
LHX1P48742 RPL36AP51-201ENST00000487216 318 ntBASIC2.83□□□□□ -1.96
LHX1P48742 RPS29P20-201ENST00000489592 171 ntBASIC2.83□□□□□ -1.96
LHX1P48742 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.83□□□□□ -1.96
LHX1P48742 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.83□□□□□ -1.96
LHX1P48742 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.83□□□□□ -1.96
LHX1P48742 RNA5SP282-201ENST00000516355 108 ntBASIC2.83□□□□□ -1.96
LHX1P48742 RNU6-405P-201ENST00000516637 110 ntBASIC2.83□□□□□ -1.96
LHX1P48742 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.83□□□□□ -1.96
LHX1P48742 AP001646.1-201ENST00000527936 915 ntBASIC2.83□□□□□ -1.96
LHX1P48742 ADI1P3-201ENST00000549509 470 ntBASIC2.83□□□□□ -1.96
LHX1P48742 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.83□□□□□ -1.96
LHX1P48742 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.83□□□□□ -1.96
LHX1P48742 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.83□□□□□ -1.96
LHX1P48742 MTCYBP33-201ENST00000575007 1130 ntBASIC2.83□□□□□ -1.96
LHX1P48742 MIR4672-201ENST00000583126 81 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms