Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.94□□□□□ -2.1
RFC3P40938 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.94□□□□□ -2.1
RFC3P40938 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.94□□□□□ -2.1
RFC3P40938 MTND3P1-201ENST00000441336 220 ntBASIC1.94□□□□□ -2.1
RFC3P40938 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.94□□□□□ -2.1
RFC3P40938 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.94□□□□□ -2.1
RFC3P40938 AC072039.1-201ENST00000477611 581 ntBASIC1.94□□□□□ -2.1
RFC3P40938 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.94□□□□□ -2.1
RFC3P40938 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.94□□□□□ -2.1
RFC3P40938 AC139453.3-201ENST00000493276 369 ntBASIC1.94□□□□□ -2.1
RFC3P40938 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.94□□□□□ -2.1
RFC3P40938 RNA5SP112-201ENST00000515937 99 ntBASIC1.94□□□□□ -2.1
RFC3P40938 EEF1A1P37-201ENST00000522748 715 ntBASIC1.94□□□□□ -2.1
RFC3P40938 DEFB108A-201ENST00000530110 222 ntBASIC1.94□□□□□ -2.1
RFC3P40938 AC068587.4-201ENST00000533893 186 ntBASIC1.94□□□□□ -2.1
RFC3P40938 NRBF2P1-201ENST00000587407 859 ntBASIC1.94□□□□□ -2.1
RFC3P40938 AC073544.2-201ENST00000601155 540 ntBASIC1.94□□□□□ -2.1
RFC3P40938 uc_338.20-201ENST00000621563 178 ntBASIC1.94□□□□□ -2.1
RFC3P40938 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
RFC3P40938 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
RFC3P40938 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.93□□□□□ -2.1
RFC3P40938 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.93□□□□□ -2.1
RFC3P40938 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
RFC3P40938 FAM133CP-201ENST00000332869 704 ntBASIC1.93□□□□□ -2.1
RFC3P40938 RNU5A-8P-201ENST00000364102 114 ntBASIC1.93□□□□□ -2.1
RFC3P40938 RNU6-188P-201ENST00000364207 107 ntBASIC1.93□□□□□ -2.1
RFC3P40938 RNU6-769P-201ENST00000384407 104 ntBASIC1.93□□□□□ -2.1
RFC3P40938 MIR122-201ENST00000385044 85 ntBASIC1.93□□□□□ -2.1
RFC3P40938 MIR147B-201ENST00000390185 80 ntBASIC1.93□□□□□ -2.1
RFC3P40938 MIR764-201ENST00000390811 85 ntBASIC1.93□□□□□ -2.1
RFC3P40938 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.93□□□□□ -2.1
RFC3P40938 NDUFS5P1-201ENST00000405668 289 ntBASIC1.93□□□□□ -2.1
RFC3P40938 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.93□□□□□ -2.1
RFC3P40938 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC1.93□□□□□ -2.1
RFC3P40938 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.93□□□□□ -2.1
RFC3P40938 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.93□□□□□ -2.1
RFC3P40938 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.93□□□□□ -2.1
RFC3P40938 AC016691.1-201ENST00000441321 413 ntBASIC1.93□□□□□ -2.1
RFC3P40938 AC124916.1-201ENST00000444020 547 ntBASIC1.93□□□□□ -2.1
RFC3P40938 OR6C5P-201ENST00000452388 923 ntBASIC1.93□□□□□ -2.1
RFC3P40938 AC108059.3-201ENST00000456388 214 ntBASIC1.93□□□□□ -2.1
RFC3P40938 RNU6-717P-201ENST00000459076 104 ntBASIC1.93□□□□□ -2.1
RFC3P40938 AP001324.2-201ENST00000461163 319 ntBASIC1.93□□□□□ -2.1
RFC3P40938 RPL23AP41-201ENST00000484754 458 ntBASIC1.93□□□□□ -2.1
RFC3P40938 AC068781.1-201ENST00000488231 618 ntBASIC1.93□□□□□ -2.1
RFC3P40938 RPL38P4-201ENST00000502376 214 ntBASIC1.93□□□□□ -2.1
RFC3P40938 AC008526.1-201ENST00000509149 338 ntBASIC1.93□□□□□ -2.1
RFC3P40938 RNA5SP200-201ENST00000516360 103 ntBASIC1.93□□□□□ -2.1
RFC3P40938 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
RFC3P40938 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.93□□□□□ -2.1
RFC3P40938 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.93□□□□□ -2.1
RFC3P40938 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.93□□□□□ -2.1
RFC3P40938 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.93□□□□□ -2.1
RFC3P40938 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
RFC3P40938 AP006587.4-201ENST00000526053 529 ntBASIC1.93□□□□□ -2.1
RFC3P40938 OR5AQ1P-201ENST00000527596 927 ntBASIC1.93□□□□□ -2.1
RFC3P40938 AP000907.2-201ENST00000530827 353 ntBASIC1.93□□□□□ -2.1
RFC3P40938 RPS3AP4-201ENST00000555161 764 ntBASIC1.93□□□□□ -2.1
RFC3P40938 MIR544B-201ENST00000582372 78 ntBASIC1.93□□□□□ -2.1
RFC3P40938 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.93□□□□□ -2.1
RFC3P40938 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.93□□□□□ -2.1
RFC3P40938 VN1R82P-201ENST00000601481 356 ntBASIC1.93□□□□□ -2.1
RFC3P40938 BCRP9-201ENST00000605312 388 ntBASIC1.93□□□□□ -2.1
RFC3P40938 AC097478.2-201ENST00000610572 514 ntBASIC1.93□□□□□ -2.1
RFC3P40938 Y_RNA.783-201ENST00000613546 102 ntBASIC1.93□□□□□ -2.1
RFC3P40938 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.93□□□□□ -2.1
RFC3P40938 AC244517.12-201ENST00000623581 663 ntBASIC1.93□□□□□ -2.1
RFC3P40938 AP003400.5-201ENST00000624827 617 ntBASIC1.93□□□□□ -2.1
RFC3P40938 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.93□□□□□ -2.1
RFC3P40938 CENPCP1-201ENST00000533085 2578 ntBASIC1.93□□□□□ -2.1
RFC3P40938 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.92□□□□□ -2.1
RFC3P40938 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
RFC3P40938 RNU1-148P-201ENST00000384472 162 ntBASIC1.92□□□□□ -2.1
RFC3P40938 AC119751.3-201ENST00000399720 670 ntBASIC1.92□□□□□ -2.1
RFC3P40938 RNA5SP338-201ENST00000410495 85 ntBASIC1.92□□□□□ -2.1
RFC3P40938 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.92□□□□□ -2.1
RFC3P40938 EIF4EP4-201ENST00000424916 578 ntBASIC1.92□□□□□ -2.1
RFC3P40938 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.92□□□□□ -2.1
RFC3P40938 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.92□□□□□ -2.1
RFC3P40938 LARP1BP3-201ENST00000437229 869 ntBASIC1.92□□□□□ -2.1
RFC3P40938 AC004383.1-201ENST00000438135 289 ntBASIC1.92□□□□□ -2.1
RFC3P40938 BRK1P2-201ENST00000442875 223 ntBASIC1.92□□□□□ -2.1
RFC3P40938 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC1.92□□□□□ -2.1
RFC3P40938 AC068587.2-201ENST00000478386 781 ntBASIC1.92□□□□□ -2.1
RFC3P40938 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.92□□□□□ -2.1
RFC3P40938 AF213884.2-201ENST00000510417 903 ntBASIC1.92□□□□□ -2.1
RFC3P40938 MRPS33P3-201ENST00000513456 322 ntBASIC1.92□□□□□ -2.1
RFC3P40938 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.92□□□□□ -2.1
RFC3P40938 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.92□□□□□ -2.1
RFC3P40938 RNU6-1183P-201ENST00000517054 60 ntBASIC1.92□□□□□ -2.1
RFC3P40938 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
RFC3P40938 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC1.92□□□□□ -2.1
RFC3P40938 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.92□□□□□ -2.1
RFC3P40938 MIR4524B-201ENST00000581569 115 ntBASIC1.92□□□□□ -2.1
RFC3P40938 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.92□□□□□ -2.1
RFC3P40938 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.92□□□□□ -2.1
RFC3P40938 U4atac.1-201ENST00000618345 95 ntBASIC1.92□□□□□ -2.1
RFC3P40938 AC013470.4-201ENST00000619978 986 ntBASIC1.92□□□□□ -2.1
RFC3P40938 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.92□□□□□ -2.1
RFC3P40938 AL356596.1-201ENST00000624230 379 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms