Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 SNORD42A-201ENST00000459584 64 ntBASIC2.56□□□□□ -2
TRIM23P36406 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.56□□□□□ -2
TRIM23P36406 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.56□□□□□ -2
TRIM23P36406 AC010587.1-201ENST00000505809 469 ntBASIC2.56□□□□□ -2
TRIM23P36406 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.56□□□□□ -2
TRIM23P36406 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC2.56□□□□□ -2
TRIM23P36406 RNA5SP148-201ENST00000516527 94 ntBASIC2.56□□□□□ -2
TRIM23P36406 RNU7-51P-201ENST00000516560 62 ntBASIC2.56□□□□□ -2
TRIM23P36406 RNA5SP337-201ENST00000517007 109 ntBASIC2.56□□□□□ -2
TRIM23P36406 ARL2BPP2-201ENST00000550907 489 ntBASIC2.56□□□□□ -2
TRIM23P36406 AL359212.1-201ENST00000556608 614 ntBASIC2.56□□□□□ -2
TRIM23P36406 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.56□□□□□ -2
TRIM23P36406 AC005771.1-201ENST00000585581 349 ntBASIC2.56□□□□□ -2
TRIM23P36406 HMGN1P30-201ENST00000589286 268 ntBASIC2.56□□□□□ -2
TRIM23P36406 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.56□□□□□ -2
TRIM23P36406 AL590229.1-201ENST00000603497 542 ntBASIC2.56□□□□□ -2
TRIM23P36406 DPPA3P3-201ENST00000603842 430 ntBASIC2.56□□□□□ -2
TRIM23P36406 AL358072.1-201ENST00000604156 575 ntBASIC2.56□□□□□ -2
TRIM23P36406 AP000860.1-201ENST00000605250 559 ntBASIC2.56□□□□□ -2
TRIM23P36406 AC004805.2-201ENST00000605382 482 ntBASIC2.56□□□□□ -2
TRIM23P36406 AC091304.9-201ENST00000612091 226 ntBASIC2.56□□□□□ -2
TRIM23P36406 MIR6895-201ENST00000613497 78 ntBASIC2.56□□□□□ -2
TRIM23P36406 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.56□□□□□ -2
TRIM23P36406 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.56□□□□□ -2
TRIM23P36406 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.56□□□□□ -2
TRIM23P36406 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.56□□□□□ -2
TRIM23P36406 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
TRIM23P36406 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
TRIM23P36406 UBE2L2-201ENST00000254302 429 ntBASIC2.55□□□□□ -2
TRIM23P36406 AC073343.1-201ENST00000328239 651 ntBASIC2.55□□□□□ -2
TRIM23P36406 RNU4-82P-201ENST00000362443 140 ntBASIC2.55□□□□□ -2
TRIM23P36406 SNORD62.1-201ENST00000362541 86 ntBASIC2.55□□□□□ -2
TRIM23P36406 SNORA25.6-201ENST00000364121 118 ntBASIC2.55□□□□□ -2
TRIM23P36406 SNORA67.4-201ENST00000384688 142 ntBASIC2.55□□□□□ -2
TRIM23P36406 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.55□□□□□ -2
TRIM23P36406 RNU2-36P-201ENST00000410361 191 ntBASIC2.55□□□□□ -2
TRIM23P36406 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.55□□□□□ -2
TRIM23P36406 RPS3AP3-201ENST00000411933 242 ntBASIC2.55□□□□□ -2
TRIM23P36406 HMGN1P14-201ENST00000412459 517 ntBASIC2.55□□□□□ -2
TRIM23P36406 NDUFS5P4-201ENST00000412983 318 ntBASIC2.55□□□□□ -2
TRIM23P36406 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.55□□□□□ -2
TRIM23P36406 RPS15AP12-201ENST00000419498 388 ntBASIC2.55□□□□□ -2
TRIM23P36406 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.55□□□□□ -2
TRIM23P36406 AL589872.1-201ENST00000426602 288 ntBASIC2.55□□□□□ -2
TRIM23P36406 AC010153.1-201ENST00000432862 727 ntBASIC2.55□□□□□ -2
TRIM23P36406 NEFMP1-201ENST00000443423 1006 ntBASIC2.55□□□□□ -2
TRIM23P36406 MRPL50P4-201ENST00000446432 475 ntBASIC2.55□□□□□ -2
TRIM23P36406 AL513328.1-201ENST00000446460 224 ntBASIC2.55□□□□□ -2
TRIM23P36406 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.55□□□□□ -2
TRIM23P36406 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.55□□□□□ -2
TRIM23P36406 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.55□□□□□ -2
TRIM23P36406 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.55□□□□□ -2
TRIM23P36406 RPS29P20-201ENST00000489592 171 ntBASIC2.55□□□□□ -2
TRIM23P36406 RPL39P36-201ENST00000490784 156 ntBASIC2.55□□□□□ -2
TRIM23P36406 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.55□□□□□ -2
TRIM23P36406 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
TRIM23P36406 AP003181.2-201ENST00000528941 181 ntBASIC2.55□□□□□ -2
TRIM23P36406 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.55□□□□□ -2
TRIM23P36406 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.55□□□□□ -2
TRIM23P36406 GLYCAM1-201ENST00000546596 285 ntBASIC2.55□□□□□ -2
TRIM23P36406 NACAP3-201ENST00000552100 481 ntBASIC2.55□□□□□ -2
TRIM23P36406 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.55□□□□□ -2
TRIM23P36406 AC234778.2-201ENST00000566241 354 ntBASIC2.55□□□□□ -2
TRIM23P36406 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.55□□□□□ -2
TRIM23P36406 NRBF2P1-201ENST00000587407 859 ntBASIC2.55□□□□□ -2
TRIM23P36406 AP002360.4-201ENST00000606980 481 ntBASIC2.55□□□□□ -2
TRIM23P36406 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.55□□□□□ -2
TRIM23P36406 U2.21-201ENST00000637295 81 ntBASIC2.55□□□□□ -2
TRIM23P36406 RNU6-701P-201ENST00000384059 107 ntBASIC2.54□□□□□ -2
TRIM23P36406 RNY3P10-201ENST00000384764 102 ntBASIC2.54□□□□□ -2
TRIM23P36406 RNU2-49P-201ENST00000410666 184 ntBASIC2.54□□□□□ -2
TRIM23P36406 RNU2-68P-201ENST00000410878 191 ntBASIC2.54□□□□□ -2
TRIM23P36406 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.54□□□□□ -2
TRIM23P36406 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.54□□□□□ -2
TRIM23P36406 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.54□□□□□ -2
TRIM23P36406 GPM6BP2-201ENST00000432046 144 ntBASIC2.54□□□□□ -2
TRIM23P36406 CR769767.1-201ENST00000436337 346 ntBASIC2.54□□□□□ -2
TRIM23P36406 MTND1P26-201ENST00000440488 538 ntBASIC2.54□□□□□ -2
TRIM23P36406 GPM6BP1-201ENST00000446387 144 ntBASIC2.54□□□□□ -2
TRIM23P36406 AL136380.1-201ENST00000447970 162 ntBASIC2.54□□□□□ -2
TRIM23P36406 SNRPGP9-201ENST00000456025 225 ntBASIC2.54□□□□□ -2
TRIM23P36406 AC126182.1-201ENST00000478134 357 ntBASIC2.54□□□□□ -2
TRIM23P36406 SNORA31.11-201ENST00000516528 139 ntBASIC2.54□□□□□ -2
TRIM23P36406 COX6CP5-201ENST00000527162 228 ntBASIC2.54□□□□□ -2
TRIM23P36406 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.54□□□□□ -2
TRIM23P36406 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.54□□□□□ -2
TRIM23P36406 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.54□□□□□ -2
TRIM23P36406 AC090616.3-201ENST00000582184 217 ntBASIC2.54□□□□□ -2
TRIM23P36406 AL356575.1-201ENST00000603008 283 ntBASIC2.54□□□□□ -2
TRIM23P36406 AL355598.1-201ENST00000604169 202 ntBASIC2.54□□□□□ -2
TRIM23P36406 AC013562.2-201ENST00000611632 603 ntBASIC2.54□□□□□ -2
TRIM23P36406 AC104237.2-201ENST00000612456 443 ntBASIC2.54□□□□□ -2
TRIM23P36406 DUSP12P1-201ENST00000612874 516 ntBASIC2.54□□□□□ -2
TRIM23P36406 AP001506.1-201ENST00000615444 211 ntBASIC2.54□□□□□ -2
TRIM23P36406 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.54□□□□□ -2
TRIM23P36406 PISRT1-201ENST00000626175 531 ntBASIC2.54□□□□□ -2
TRIM23P36406 MTND5P42-201ENST00000637720 498 ntBASIC2.54□□□□□ -2
TRIM23P36406 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.54□□□□□ -2
TRIM23P36406 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.54□□□□□ -2
TRIM23P36406 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 128.7 ms