Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.17□□□□□ -2.06
RORAP35398 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.17□□□□□ -2.06
RORAP35398 AL356432.3-201ENST00000568952 465 ntBASIC2.17□□□□□ -2.06
RORAP35398 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.17□□□□□ -2.06
RORAP35398 AC104984.5-201ENST00000586878 94 ntBASIC2.17□□□□□ -2.06
RORAP35398 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.17□□□□□ -2.06
RORAP35398 AP000403.1-201ENST00000603349 851 ntBASIC2.17□□□□□ -2.06
RORAP35398 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.17□□□□□ -2.06
RORAP35398 AL589743.7-201ENST00000612637 233 ntBASIC2.17□□□□□ -2.06
RORAP35398 MIR6715A-201ENST00000615929 79 ntBASIC2.17□□□□□ -2.06
RORAP35398 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.17□□□□□ -2.06
RORAP35398 AP002782.1-201ENST00000623107 614 ntBASIC2.17□□□□□ -2.06
RORAP35398 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
RORAP35398 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.17□□□□□ -2.06
RORAP35398 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.17□□□□□ -2.06
RORAP35398 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
RORAP35398 RNU6-1284P-201ENST00000363701 100 ntBASIC2.16□□□□□ -2.06
RORAP35398 RNU6-512P-201ENST00000364438 103 ntBASIC2.16□□□□□ -2.06
RORAP35398 RNU6-278P-201ENST00000390945 109 ntBASIC2.16□□□□□ -2.06
RORAP35398 RPS20P2-201ENST00000402520 389 ntBASIC2.16□□□□□ -2.06
RORAP35398 NDUFS5P1-201ENST00000405668 289 ntBASIC2.16□□□□□ -2.06
RORAP35398 ZNF90P2-204ENST00000419323 1075 ntBASIC2.16□□□□□ -2.06
RORAP35398 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.16□□□□□ -2.06
RORAP35398 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
RORAP35398 GPM6BP2-201ENST00000432046 144 ntBASIC2.16□□□□□ -2.06
RORAP35398 RPS15AP28-201ENST00000435088 386 ntBASIC2.16□□□□□ -2.06
RORAP35398 AC096638.1-201ENST00000444678 216 ntBASIC2.16□□□□□ -2.06
RORAP35398 GPM6BP1-201ENST00000446387 144 ntBASIC2.16□□□□□ -2.06
RORAP35398 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.16□□□□□ -2.06
RORAP35398 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.16□□□□□ -2.06
RORAP35398 snoU13.15-201ENST00000459407 104 ntBASIC2.16□□□□□ -2.06
RORAP35398 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
RORAP35398 AC072039.1-201ENST00000477611 581 ntBASIC2.16□□□□□ -2.06
RORAP35398 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC2.16□□□□□ -2.06
RORAP35398 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.16□□□□□ -2.06
RORAP35398 IGKV3-31-201ENST00000523109 329 ntBASIC2.16□□□□□ -2.06
RORAP35398 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.16□□□□□ -2.06
RORAP35398 AC123904.2-201ENST00000548059 300 ntBASIC2.16□□□□□ -2.06
RORAP35398 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.16□□□□□ -2.06
RORAP35398 NACAP3-201ENST00000552100 481 ntBASIC2.16□□□□□ -2.06
RORAP35398 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC2.16□□□□□ -2.06
RORAP35398 AC090888.2-201ENST00000559765 1144 ntBASIC2.16□□□□□ -2.06
RORAP35398 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.16□□□□□ -2.06
RORAP35398 AP000811.1-201ENST00000603803 651 ntBASIC2.16□□□□□ -2.06
RORAP35398 AL021997.1-201ENST00000605757 193 ntBASIC2.16□□□□□ -2.06
RORAP35398 AL161423.1-201ENST00000613700 262 ntBASIC2.16□□□□□ -2.06
RORAP35398 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC2.16□□□□□ -2.06
RORAP35398 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
RORAP35398 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
RORAP35398 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.16□□□□□ -2.06
RORAP35398 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
RORAP35398 AC010889.1-201ENST00000566193 2666 ntBASIC2.15□□□□□ -2.06
RORAP35398 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
RORAP35398 UBE2L2-201ENST00000254302 429 ntBASIC2.15□□□□□ -2.07
RORAP35398 AL596028.1-201ENST00000326971 197 ntBASIC2.15□□□□□ -2.07
RORAP35398 MIRLET7G-201ENST00000362280 84 ntBASIC2.15□□□□□ -2.07
RORAP35398 RNU6-1214P-201ENST00000363650 109 ntBASIC2.15□□□□□ -2.07
RORAP35398 RNU1-91P-201ENST00000364746 163 ntBASIC2.15□□□□□ -2.07
RORAP35398 MIR218-1-201ENST00000384999 110 ntBASIC2.15□□□□□ -2.07
RORAP35398 U8.14-201ENST00000390843 143 ntBASIC2.15□□□□□ -2.07
RORAP35398 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.15□□□□□ -2.07
RORAP35398 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC2.15□□□□□ -2.07
RORAP35398 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.15□□□□□ -2.07
RORAP35398 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.15□□□□□ -2.07
RORAP35398 MTND1P23-201ENST00000416931 372 ntBASIC2.15□□□□□ -2.07
RORAP35398 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.15□□□□□ -2.07
RORAP35398 RPL36AP53-201ENST00000432891 316 ntBASIC2.15□□□□□ -2.07
RORAP35398 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
RORAP35398 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.15□□□□□ -2.07
RORAP35398 PSPHP1-201ENST00000450062 261 ntBASIC2.15□□□□□ -2.07
RORAP35398 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.15□□□□□ -2.07
RORAP35398 snoU13.26-201ENST00000459452 105 ntBASIC2.15□□□□□ -2.07
RORAP35398 AC139453.3-201ENST00000493276 369 ntBASIC2.15□□□□□ -2.07
RORAP35398 SNORA31.6-201ENST00000516241 130 ntBASIC2.15□□□□□ -2.07
RORAP35398 SCARNA3-201ENST00000517097 143 ntBASIC2.15□□□□□ -2.07
RORAP35398 RNU6-1003P-201ENST00000517099 105 ntBASIC2.15□□□□□ -2.07
RORAP35398 MTCYBP20-201ENST00000524239 1129 ntBASIC2.15□□□□□ -2.07
RORAP35398 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.15□□□□□ -2.07
RORAP35398 CYCSP26-201ENST00000534107 320 ntBASIC2.15□□□□□ -2.07
RORAP35398 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.15□□□□□ -2.07
RORAP35398 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.15□□□□□ -2.07
RORAP35398 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.15□□□□□ -2.07
RORAP35398 AP001004.1-201ENST00000582468 324 ntBASIC2.15□□□□□ -2.07
RORAP35398 AL358072.1-201ENST00000604156 575 ntBASIC2.15□□□□□ -2.07
RORAP35398 DUSP12P1-201ENST00000612874 516 ntBASIC2.15□□□□□ -2.07
RORAP35398 MIR6766-201ENST00000622641 72 ntBASIC2.15□□□□□ -2.07
RORAP35398 AC079416.3-201ENST00000624479 549 ntBASIC2.15□□□□□ -2.07
RORAP35398 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
RORAP35398 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
RORAP35398 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
RORAP35398 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
RORAP35398 Y_RNA.18-201ENST00000362461 102 ntBASIC2.14□□□□□ -2.07
RORAP35398 RNU6-188P-201ENST00000364207 107 ntBASIC2.14□□□□□ -2.07
RORAP35398 RNU1-51P-201ENST00000365345 176 ntBASIC2.14□□□□□ -2.07
RORAP35398 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
RORAP35398 AL021407.1-201ENST00000404531 386 ntBASIC2.14□□□□□ -2.07
RORAP35398 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.14□□□□□ -2.07
RORAP35398 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC2.14□□□□□ -2.07
RORAP35398 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.14□□□□□ -2.07
RORAP35398 AC104651.1-201ENST00000427559 735 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms