Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.5□□□□□ -1.85
CIITAP33076 SNORA70.16-201ENST00000516390 95 ntBASIC3.5□□□□□ -1.85
CIITAP33076 SNORA74D-201ENST00000516404 141 ntBASIC3.5□□□□□ -1.85
CIITAP33076 SNORD60.2-201ENST00000516883 86 ntBASIC3.5□□□□□ -1.85
CIITAP33076 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.5□□□□□ -1.85
CIITAP33076 OR5AL2P-201ENST00000532185 920 ntBASIC3.5□□□□□ -1.85
CIITAP33076 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.5□□□□□ -1.85
CIITAP33076 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.5□□□□□ -1.85
CIITAP33076 AC037471.2-201ENST00000564941 598 ntBASIC3.5□□□□□ -1.85
CIITAP33076 AC005951.2-201ENST00000576282 495 ntBASIC3.5□□□□□ -1.85
CIITAP33076 AF038458.1-201ENST00000588406 262 ntBASIC3.5□□□□□ -1.85
CIITAP33076 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.5□□□□□ -1.85
CIITAP33076 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.5□□□□□ -1.85
CIITAP33076 BNIP3P10-201ENST00000605360 577 ntBASIC3.5□□□□□ -1.85
CIITAP33076 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CIITAP33076 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CIITAP33076 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
CIITAP33076 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CIITAP33076 ASNSP3-201ENST00000451989 1306 ntBASIC3.49□□□□□ -1.85
CIITAP33076 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
CIITAP33076 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CIITAP33076 ZNF826P-207ENST00000622273 1910 ntBASIC3.49□□□□□ -1.85
CIITAP33076 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CIITAP33076 CBX3P1-201ENST00000325243 554 ntBASIC3.49□□□□□ -1.85
CIITAP33076 AC073325.2-201ENST00000339545 159 ntBASIC3.49□□□□□ -1.85
CIITAP33076 RNA5SP383-201ENST00000362934 120 ntBASIC3.49□□□□□ -1.85
CIITAP33076 SNORD115-7-201ENST00000365306 82 ntBASIC3.49□□□□□ -1.85
CIITAP33076 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CIITAP33076 SNORA36C-201ENST00000384289 132 ntBASIC3.49□□□□□ -1.85
CIITAP33076 RNA5SP118-201ENST00000410385 109 ntBASIC3.49□□□□□ -1.85
CIITAP33076 RNU2-41P-201ENST00000410991 178 ntBASIC3.49□□□□□ -1.85
CIITAP33076 AC245291.1-201ENST00000419501 328 ntBASIC3.49□□□□□ -1.85
CIITAP33076 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.49□□□□□ -1.85
CIITAP33076 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.49□□□□□ -1.85
CIITAP33076 RPL36AP6-201ENST00000435770 321 ntBASIC3.49□□□□□ -1.85
CIITAP33076 AC098614.3-201ENST00000438957 440 ntBASIC3.49□□□□□ -1.85
CIITAP33076 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.49□□□□□ -1.85
CIITAP33076 PMCHL2-203ENST00000457791 237 ntBASIC3.49□□□□□ -1.85
CIITAP33076 AP000852.1-201ENST00000472460 573 ntBASIC3.49□□□□□ -1.85
CIITAP33076 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.49□□□□□ -1.85
CIITAP33076 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.49□□□□□ -1.85
CIITAP33076 AP006587.4-201ENST00000526053 529 ntBASIC3.49□□□□□ -1.85
CIITAP33076 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.49□□□□□ -1.85
CIITAP33076 RPL23AP84-201ENST00000571193 464 ntBASIC3.49□□□□□ -1.85
CIITAP33076 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.49□□□□□ -1.85
CIITAP33076 MIR4424-201ENST00000585257 86 ntBASIC3.49□□□□□ -1.85
CIITAP33076 UBE2V2P2-201ENST00000587677 504 ntBASIC3.49□□□□□ -1.85
CIITAP33076 AC008962.1-201ENST00000605729 304 ntBASIC3.49□□□□□ -1.85
CIITAP33076 AC069234.5-201ENST00000611056 416 ntBASIC3.49□□□□□ -1.85
CIITAP33076 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.49□□□□□ -1.85
CIITAP33076 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.49□□□□□ -1.85
CIITAP33076 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.49□□□□□ -1.85
CIITAP33076 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CIITAP33076 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.49□□□□□ -1.85
CIITAP33076 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CIITAP33076 AL035425.3-201ENST00000564206 4996 ntBASIC3.48□□□□□ -1.85
CIITAP33076 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
CIITAP33076 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CIITAP33076 RNU5A-1-201ENST00000362698 116 ntBASIC3.48□□□□□ -1.85
CIITAP33076 RNU6-552P-201ENST00000362869 119 ntBASIC3.48□□□□□ -1.85
CIITAP33076 RNU6-701P-201ENST00000384059 107 ntBASIC3.48□□□□□ -1.85
CIITAP33076 MIR514A2-201ENST00000385131 88 ntBASIC3.48□□□□□ -1.85
CIITAP33076 MIR514A3-201ENST00000385132 88 ntBASIC3.48□□□□□ -1.85
CIITAP33076 RNU6-332P-201ENST00000391193 108 ntBASIC3.48□□□□□ -1.85
CIITAP33076 RPS4XP3-201ENST00000398541 413 ntBASIC3.48□□□□□ -1.85
CIITAP33076 RNU6-1077P-201ENST00000410506 102 ntBASIC3.48□□□□□ -1.85
CIITAP33076 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.48□□□□□ -1.85
CIITAP33076 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.48□□□□□ -1.85
CIITAP33076 RAC1P6-201ENST00000423911 575 ntBASIC3.48□□□□□ -1.85
CIITAP33076 UBE2D3P2-201ENST00000424409 445 ntBASIC3.48□□□□□ -1.85
CIITAP33076 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.48□□□□□ -1.85
CIITAP33076 MTND1P18-201ENST00000448191 573 ntBASIC3.48□□□□□ -1.85
CIITAP33076 RNA5SP310-201ENST00000459084 116 ntBASIC3.48□□□□□ -1.85
CIITAP33076 RPL38P4-201ENST00000502376 214 ntBASIC3.48□□□□□ -1.85
CIITAP33076 AC025465.4-201ENST00000513422 638 ntBASIC3.48□□□□□ -1.85
CIITAP33076 AC046134.1-201ENST00000514454 666 ntBASIC3.48□□□□□ -1.85
CIITAP33076 RAB11AP2-201ENST00000545905 639 ntBASIC3.48□□□□□ -1.85
CIITAP33076 OR4H12P-201ENST00000556269 907 ntBASIC3.48□□□□□ -1.85
CIITAP33076 MIR4703-201ENST00000577728 79 ntBASIC3.48□□□□□ -1.85
CIITAP33076 AC018638.8-201ENST00000588755 281 ntBASIC3.48□□□□□ -1.85
CIITAP33076 AL117336.2-201ENST00000602435 335 ntBASIC3.48□□□□□ -1.85
CIITAP33076 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.48□□□□□ -1.85
CIITAP33076 C8orf59P2-201ENST00000603441 271 ntBASIC3.48□□□□□ -1.85
CIITAP33076 AL138880.2-201ENST00000616214 239 ntBASIC3.48□□□□□ -1.85
CIITAP33076 AL359314.1-201ENST00000616913 261 ntBASIC3.48□□□□□ -1.85
CIITAP33076 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.48□□□□□ -1.85
CIITAP33076 AC025034.2-201ENST00000623264 286 ntBASIC3.48□□□□□ -1.85
CIITAP33076 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
CIITAP33076 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
CIITAP33076 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CIITAP33076 MTND4P12-201ENST00000498999 1377 ntBASIC3.48□□□□□ -1.85
CIITAP33076 MIR422A-201ENST00000362286 90 ntBASIC3.47□□□□□ -1.85
CIITAP33076 RNU6-946P-201ENST00000383878 107 ntBASIC3.47□□□□□ -1.85
CIITAP33076 RNU6-38P-201ENST00000384085 107 ntBASIC3.47□□□□□ -1.85
CIITAP33076 Y_RNA.576-201ENST00000384781 102 ntBASIC3.47□□□□□ -1.85
CIITAP33076 MIR493-201ENST00000385254 89 ntBASIC3.47□□□□□ -1.85
CIITAP33076 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
CIITAP33076 SNORD67-201ENST00000390833 111 ntBASIC3.47□□□□□ -1.85
CIITAP33076 TXNP7-201ENST00000406296 293 ntBASIC3.47□□□□□ -1.85
CIITAP33076 U3.42-201ENST00000408746 214 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms