Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AC090971.5-201ENST00000621102 293 ntBASIC3.74□□□□□ -1.81
SLC6A4P31645 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SLC6A4P31645 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.74□□□□□ -1.81
SLC6A4P31645 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SLC6A4P31645 ZNF519P1-201ENST00000449011 1626 ntBASIC3.73□□□□□ -1.81
SLC6A4P31645 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.73□□□□□ -1.81
SLC6A4P31645 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.73□□□□□ -1.81
SLC6A4P31645 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
SLC6A4P31645 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SLC6A4P31645 RNU6-562P-201ENST00000362731 107 ntBASIC3.73□□□□□ -1.81
SLC6A4P31645 RNU6-741P-201ENST00000383889 107 ntBASIC3.73□□□□□ -1.81
SLC6A4P31645 Y_RNA.482-201ENST00000384377 111 ntBASIC3.73□□□□□ -1.81
SLC6A4P31645 AL139397.2-201ENST00000404529 772 ntBASIC3.73□□□□□ -1.81
SLC6A4P31645 RPS4XP7-201ENST00000406274 780 ntBASIC3.73□□□□□ -1.81
SLC6A4P31645 RPS29P4-201ENST00000414733 161 ntBASIC3.73□□□□□ -1.81
SLC6A4P31645 AC063979.1-201ENST00000415539 377 ntBASIC3.73□□□□□ -1.81
SLC6A4P31645 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.73□□□□□ -1.81
SLC6A4P31645 ATG3P1-201ENST00000419507 911 ntBASIC3.73□□□□□ -1.81
SLC6A4P31645 RPL21P109-201ENST00000422213 475 ntBASIC3.73□□□□□ -1.81
SLC6A4P31645 AC073063.1-201ENST00000434352 607 ntBASIC3.73□□□□□ -1.81
SLC6A4P31645 RPS3AP52-201ENST00000435639 297 ntBASIC3.73□□□□□ -1.81
SLC6A4P31645 RPL32P28-201ENST00000443577 397 ntBASIC3.73□□□□□ -1.81
SLC6A4P31645 HMGB1P30-201ENST00000492455 606 ntBASIC3.73□□□□□ -1.81
SLC6A4P31645 AC026801.1-201ENST00000497178 464 ntBASIC3.73□□□□□ -1.81
SLC6A4P31645 RPS27P27-201ENST00000498779 255 ntBASIC3.73□□□□□ -1.81
SLC6A4P31645 RN7SKP24-201ENST00000515888 284 ntBASIC3.73□□□□□ -1.81
SLC6A4P31645 RNU6-1256P-201ENST00000516539 103 ntBASIC3.73□□□□□ -1.81
SLC6A4P31645 Y_RNA.718-201ENST00000517110 102 ntBASIC3.73□□□□□ -1.81
SLC6A4P31645 AP005639.2-201ENST00000527592 928 ntBASIC3.73□□□□□ -1.81
SLC6A4P31645 MIR1273C-201ENST00000578669 77 ntBASIC3.73□□□□□ -1.81
SLC6A4P31645 AL161798.1-201ENST00000604630 131 ntBASIC3.73□□□□□ -1.81
SLC6A4P31645 Y_RNA.812-201ENST00000610788 101 ntBASIC3.73□□□□□ -1.81
SLC6A4P31645 Y_RNA.784-201ENST00000613803 101 ntBASIC3.73□□□□□ -1.81
SLC6A4P31645 FAM157A-202ENST00000615155 405 ntBASIC3.73□□□□□ -1.81
SLC6A4P31645 Y_RNA.787-201ENST00000616522 101 ntBASIC3.73□□□□□ -1.81
SLC6A4P31645 Y_RNA.780-201ENST00000617336 101 ntBASIC3.73□□□□□ -1.81
SLC6A4P31645 Y_RNA.801-201ENST00000619005 101 ntBASIC3.73□□□□□ -1.81
SLC6A4P31645 AL512643.1-201ENST00000635735 524 ntBASIC3.73□□□□□ -1.81
SLC6A4P31645 AC008568.2-201ENST00000623862 2313 ntBASIC3.73□□□□□ -1.81
SLC6A4P31645 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
SLC6A4P31645 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.73□□□□□ -1.81
SLC6A4P31645 AC007656.2-201ENST00000624902 4547 ntBASIC3.73□□□□□ -1.81
SLC6A4P31645 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
SLC6A4P31645 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.72□□□□□ -1.81
SLC6A4P31645 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
SLC6A4P31645 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SLC6A4P31645 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.72□□□□□ -1.81
SLC6A4P31645 SNORA31-201ENST00000362607 130 ntBASIC3.72□□□□□ -1.81
SLC6A4P31645 RNU6-395P-201ENST00000365662 106 ntBASIC3.72□□□□□ -1.81
SLC6A4P31645 RNY4P36-201ENST00000391116 96 ntBASIC3.72□□□□□ -1.81
SLC6A4P31645 AL138878.1-201ENST00000405131 347 ntBASIC3.72□□□□□ -1.81
SLC6A4P31645 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.72□□□□□ -1.81
SLC6A4P31645 Z85995.1-201ENST00000415547 335 ntBASIC3.72□□□□□ -1.81
SLC6A4P31645 RPL21P90-201ENST00000415692 466 ntBASIC3.72□□□□□ -1.81
SLC6A4P31645 AF228730.4-201ENST00000421457 183 ntBASIC3.72□□□□□ -1.81
SLC6A4P31645 AL592045.1-201ENST00000429867 352 ntBASIC3.72□□□□□ -1.81
SLC6A4P31645 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.72□□□□□ -1.81
SLC6A4P31645 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.72□□□□□ -1.81
SLC6A4P31645 AC008716.1-201ENST00000511084 513 ntBASIC3.72□□□□□ -1.81
SLC6A4P31645 TBCAP3-201ENST00000512475 312 ntBASIC3.72□□□□□ -1.81
SLC6A4P31645 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.72□□□□□ -1.81
SLC6A4P31645 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC3.72□□□□□ -1.81
SLC6A4P31645 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.72□□□□□ -1.81
SLC6A4P31645 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.72□□□□□ -1.81
SLC6A4P31645 AC100830.2-201ENST00000581636 240 ntBASIC3.72□□□□□ -1.81
SLC6A4P31645 MIR5690-201ENST00000583739 73 ntBASIC3.72□□□□□ -1.81
SLC6A4P31645 CYP2C61P-201ENST00000604072 290 ntBASIC3.72□□□□□ -1.81
SLC6A4P31645 AC005034.5-201ENST00000604219 466 ntBASIC3.72□□□□□ -1.81
SLC6A4P31645 AC006023.2-201ENST00000609916 167 ntBASIC3.72□□□□□ -1.81
SLC6A4P31645 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.72□□□□□ -1.81
SLC6A4P31645 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.72□□□□□ -1.81
SLC6A4P31645 Z99571.1-201ENST00000636677 394 ntBASIC3.72□□□□□ -1.81
SLC6A4P31645 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.72□□□□□ -1.81
SLC6A4P31645 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
SLC6A4P31645 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SLC6A4P31645 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SLC6A4P31645 USP8P1-201ENST00000494673 3183 ntBASIC3.71□□□□□ -1.81
SLC6A4P31645 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.71□□□□□ -1.81
SLC6A4P31645 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.71□□□□□ -1.81
SLC6A4P31645 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SLC6A4P31645 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SLC6A4P31645 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.71□□□□□ -1.82
SLC6A4P31645 RNU6-266P-201ENST00000364225 107 ntBASIC3.71□□□□□ -1.82
SLC6A4P31645 RNU6-512P-201ENST00000364438 103 ntBASIC3.71□□□□□ -1.82
SLC6A4P31645 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.71□□□□□ -1.82
SLC6A4P31645 RNU6-214P-201ENST00000384130 107 ntBASIC3.71□□□□□ -1.82
SLC6A4P31645 HMGN2P8-201ENST00000391458 268 ntBASIC3.71□□□□□ -1.82
SLC6A4P31645 PTMAP5-201ENST00000393073 333 ntBASIC3.71□□□□□ -1.82
SLC6A4P31645 AL391417.1-201ENST00000404100 426 ntBASIC3.71□□□□□ -1.82
SLC6A4P31645 MTHFD2P2-201ENST00000407725 247 ntBASIC3.71□□□□□ -1.82
SLC6A4P31645 RNU2-33P-201ENST00000410344 192 ntBASIC3.71□□□□□ -1.82
SLC6A4P31645 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.71□□□□□ -1.82
SLC6A4P31645 BTF3L4P3-201ENST00000418879 476 ntBASIC3.71□□□□□ -1.82
SLC6A4P31645 CYCSP4-201ENST00000429682 331 ntBASIC3.71□□□□□ -1.82
SLC6A4P31645 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.71□□□□□ -1.82
SLC6A4P31645 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.71□□□□□ -1.82
SLC6A4P31645 MTCYBP6-201ENST00000441810 138 ntBASIC3.71□□□□□ -1.82
SLC6A4P31645 AL359672.1-201ENST00000442302 409 ntBASIC3.71□□□□□ -1.82
SLC6A4P31645 SNORA70.16-201ENST00000516390 95 ntBASIC3.71□□□□□ -1.82
SLC6A4P31645 RNA5SP471-201ENST00000516971 106 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms