Protein–RNA interactions for Protein: P31431

SDC4, Syndecan-4, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P31431 AC023825.1-201ENST00000566704 1030 ntBASIC1.13□□□□□ -2.23
SDC4P31431 MIR4498-201ENST00000577599 66 ntBASIC1.13□□□□□ -2.23
SDC4P31431 MIR4295-201ENST00000585286 85 ntBASIC1.13□□□□□ -2.23
SDC4P31431 AL359821.1-201ENST00000605519 182 ntBASIC1.13□□□□□ -2.23
SDC4P31431 AC024257.5-201ENST00000612739 531 ntBASIC1.13□□□□□ -2.23
SDC4P31431 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC1.13□□□□□ -2.23
SDC4P31431 AC099842.1-201ENST00000619919 596 ntBASIC1.13□□□□□ -2.23
SDC4P31431 AC007490.1-201ENST00000624321 703 ntBASIC1.13□□□□□ -2.23
SDC4P31431 AL159972.1-201ENST00000625150 448 ntBASIC1.13□□□□□ -2.23
SDC4P31431 DBF4P1-201ENST00000412976 1892 ntBASIC1.13□□□□□ -2.23
SDC4P31431 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.13□□□□□ -2.23
SDC4P31431 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC1.12□□□□□ -2.23
SDC4P31431 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
SDC4P31431 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.12□□□□□ -2.23
SDC4P31431 RNU6-939P-201ENST00000384634 107 ntBASIC1.12□□□□□ -2.23
SDC4P31431 MIR561-201ENST00000385216 97 ntBASIC1.12□□□□□ -2.23
SDC4P31431 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC1.12□□□□□ -2.23
SDC4P31431 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.12□□□□□ -2.23
SDC4P31431 BTF3P8-201ENST00000414577 526 ntBASIC1.12□□□□□ -2.23
SDC4P31431 MTCO1P53-201ENST00000441633 699 ntBASIC1.12□□□□□ -2.23
SDC4P31431 AL161788.1-201ENST00000441805 169 ntBASIC1.12□□□□□ -2.23
SDC4P31431 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.12□□□□□ -2.23
SDC4P31431 AC018437.1-201ENST00000492214 406 ntBASIC1.12□□□□□ -2.23
SDC4P31431 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.12□□□□□ -2.23
SDC4P31431 AC108729.3-201ENST00000513484 108 ntBASIC1.12□□□□□ -2.23
SDC4P31431 SNORA48.11-201ENST00000517015 89 ntBASIC1.12□□□□□ -2.23
SDC4P31431 AC093519.1-201ENST00000566109 298 ntBASIC1.12□□□□□ -2.23
SDC4P31431 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC1.12□□□□□ -2.23
SDC4P31431 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC1.12□□□□□ -2.23
SDC4P31431 AP001429.1-201ENST00000602568 530 ntBASIC1.12□□□□□ -2.23
SDC4P31431 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.12□□□□□ -2.23
SDC4P31431 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.12□□□□□ -2.23
SDC4P31431 SUCLA2P2-201ENST00000417269 1309 ntBASIC1.12□□□□□ -2.23
SDC4P31431 AP000776.1-201ENST00000530032 1663 ntBASIC1.11□□□□□ -2.23
SDC4P31431 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
SDC4P31431 TRIM60P5Y-201ENST00000413946 574 ntBASIC1.11□□□□□ -2.23
SDC4P31431 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.11□□□□□ -2.23
SDC4P31431 SNRPEP10-201ENST00000420249 274 ntBASIC1.11□□□□□ -2.23
SDC4P31431 AC092648.1-201ENST00000425870 423 ntBASIC1.11□□□□□ -2.23
SDC4P31431 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC1.11□□□□□ -2.23
SDC4P31431 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.11□□□□□ -2.23
SDC4P31431 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.11□□□□□ -2.23
SDC4P31431 RPS29P28-201ENST00000446439 141 ntBASIC1.11□□□□□ -2.23
SDC4P31431 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.11□□□□□ -2.23
SDC4P31431 SNORD97-201ENST00000459187 142 ntBASIC1.11□□□□□ -2.23
SDC4P31431 AC087343.1-201ENST00000477341 475 ntBASIC1.11□□□□□ -2.23
SDC4P31431 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.11□□□□□ -2.23
SDC4P31431 NDUFA5P6-201ENST00000542110 379 ntBASIC1.11□□□□□ -2.23
SDC4P31431 MIR3124-201ENST00000582636 67 ntBASIC1.11□□□□□ -2.23
SDC4P31431 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC1.11□□□□□ -2.23
SDC4P31431 MTCYBP22-201ENST00000603788 447 ntBASIC1.11□□□□□ -2.23
SDC4P31431 AC091152.3-201ENST00000604227 325 ntBASIC1.11□□□□□ -2.23
SDC4P31431 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.11□□□□□ -2.23
SDC4P31431 AL512506.2-201ENST00000624472 458 ntBASIC1.11□□□□□ -2.23
SDC4P31431 AC091895.1-201ENST00000624494 256 ntBASIC1.11□□□□□ -2.23
SDC4P31431 MFSD8-213ENST00000641134 1327 ntBASIC1.11□□□□□ -2.23
SDC4P31431 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
SDC4P31431 Y_RNA.67-201ENST00000362870 100 ntBASIC1.1□□□□□ -2.23
SDC4P31431 SNORD14B-201ENST00000364533 90 ntBASIC1.1□□□□□ -2.23
SDC4P31431 RNU6-53P-201ENST00000365367 106 ntBASIC1.1□□□□□ -2.23
SDC4P31431 SNORD116-23-201ENST00000384645 92 ntBASIC1.1□□□□□ -2.23
SDC4P31431 RNA5SP465-201ENST00000391195 109 ntBASIC1.1□□□□□ -2.23
SDC4P31431 RPL23AP36-201ENST00000413895 458 ntBASIC1.1□□□□□ -2.23
SDC4P31431 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC1.1□□□□□ -2.23
SDC4P31431 AC019178.2-201ENST00000423595 505 ntBASIC1.1□□□□□ -2.23
SDC4P31431 RPL30P12-201ENST00000474666 353 ntBASIC1.1□□□□□ -2.23
SDC4P31431 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.1□□□□□ -2.23
SDC4P31431 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.1□□□□□ -2.23
SDC4P31431 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
SDC4P31431 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC1.1□□□□□ -2.23
SDC4P31431 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.1□□□□□ -2.23
SDC4P31431 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.1□□□□□ -2.23
SDC4P31431 AL356432.3-201ENST00000568952 465 ntBASIC1.1□□□□□ -2.23
SDC4P31431 AC005261.5-201ENST00000596280 355 ntBASIC1.1□□□□□ -2.23
SDC4P31431 AL670379.6-201ENST00000603753 252 ntBASIC1.1□□□□□ -2.23
SDC4P31431 AL670379.11-201ENST00000604059 253 ntBASIC1.1□□□□□ -2.23
SDC4P31431 AL670379.10-201ENST00000604330 253 ntBASIC1.1□□□□□ -2.23
SDC4P31431 AC008162.1-201ENST00000604718 254 ntBASIC1.1□□□□□ -2.23
SDC4P31431 AL670379.1-201ENST00000604752 252 ntBASIC1.1□□□□□ -2.23
SDC4P31431 AL670379.2-201ENST00000604983 252 ntBASIC1.1□□□□□ -2.23
SDC4P31431 AL670379.5-201ENST00000605253 252 ntBASIC1.1□□□□□ -2.23
SDC4P31431 AL670379.4-201ENST00000605279 254 ntBASIC1.1□□□□□ -2.23
SDC4P31431 AL670379.12-201ENST00000605291 253 ntBASIC1.1□□□□□ -2.23
SDC4P31431 AL670379.8-201ENST00000605353 252 ntBASIC1.1□□□□□ -2.23
SDC4P31431 AL670379.9-201ENST00000605428 253 ntBASIC1.1□□□□□ -2.23
SDC4P31431 AL670379.7-201ENST00000605823 252 ntBASIC1.1□□□□□ -2.23
SDC4P31431 AC239868.4-201ENST00000608318 671 ntBASIC1.1□□□□□ -2.23
SDC4P31431 AL118508.4-201ENST00000624142 1176 ntBASIC1.1□□□□□ -2.23
SDC4P31431 U2.21-201ENST00000637295 81 ntBASIC1.1□□□□□ -2.23
SDC4P31431 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.1□□□□□ -2.23
SDC4P31431 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
SDC4P31431 RNA5SP432-201ENST00000362480 116 ntBASIC1.09□□□□□ -2.23
SDC4P31431 RNU6-392P-201ENST00000364926 101 ntBASIC1.09□□□□□ -2.23
SDC4P31431 MIR513A1-201ENST00000385138 129 ntBASIC1.09□□□□□ -2.23
SDC4P31431 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.09□□□□□ -2.23
SDC4P31431 AL592310.1-201ENST00000414330 671 ntBASIC1.09□□□□□ -2.23
SDC4P31431 UBE2V1P4-201ENST00000425374 344 ntBASIC1.09□□□□□ -2.23
SDC4P31431 TOMM22P2-201ENST00000430735 237 ntBASIC1.09□□□□□ -2.23
SDC4P31431 AL365400.1-201ENST00000431854 640 ntBASIC1.09□□□□□ -2.23
SDC4P31431 ZNF965P-201ENST00000432501 817 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms