Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC2.57□□□□□ -2
PTPN4P29074 AC107934.1-201ENST00000522215 217 ntBASIC2.57□□□□□ -2
PTPN4P29074 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.57□□□□□ -2
PTPN4P29074 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.57□□□□□ -2
PTPN4P29074 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.57□□□□□ -2
PTPN4P29074 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.57□□□□□ -2
PTPN4P29074 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.57□□□□□ -2
PTPN4P29074 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.57□□□□□ -2
PTPN4P29074 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.57□□□□□ -2
PTPN4P29074 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.57□□□□□ -2
PTPN4P29074 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.57□□□□□ -2
PTPN4P29074 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.57□□□□□ -2
PTPN4P29074 AL356280.1-201ENST00000603614 379 ntBASIC2.57□□□□□ -2
PTPN4P29074 AC098826.3-201ENST00000603823 466 ntBASIC2.57□□□□□ -2
PTPN4P29074 AC112191.3-201ENST00000604371 277 ntBASIC2.57□□□□□ -2
PTPN4P29074 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.57□□□□□ -2
PTPN4P29074 AC068057.2-201ENST00000624047 895 ntBASIC2.57□□□□□ -2
PTPN4P29074 AC110491.1-201ENST00000562191 2010 ntBASIC2.57□□□□□ -2
PTPN4P29074 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
PTPN4P29074 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.57□□□□□ -2
PTPN4P29074 UBE2L2-201ENST00000254302 429 ntBASIC2.56□□□□□ -2
PTPN4P29074 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.56□□□□□ -2
PTPN4P29074 SNORA38-201ENST00000363946 132 ntBASIC2.56□□□□□ -2
PTPN4P29074 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.56□□□□□ -2
PTPN4P29074 RNU6-750P-201ENST00000390946 107 ntBASIC2.56□□□□□ -2
PTPN4P29074 MRPL42P2-201ENST00000403169 426 ntBASIC2.56□□□□□ -2
PTPN4P29074 RNU2-8P-201ENST00000410727 190 ntBASIC2.56□□□□□ -2
PTPN4P29074 RN7SKP284-201ENST00000411002 343 ntBASIC2.56□□□□□ -2
PTPN4P29074 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC2.56□□□□□ -2
PTPN4P29074 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.56□□□□□ -2
PTPN4P29074 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.56□□□□□ -2
PTPN4P29074 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.56□□□□□ -2
PTPN4P29074 NEFMP1-201ENST00000443423 1006 ntBASIC2.56□□□□□ -2
PTPN4P29074 AC104389.3-201ENST00000445629 235 ntBASIC2.56□□□□□ -2
PTPN4P29074 MTATP6P7-201ENST00000453315 681 ntBASIC2.56□□□□□ -2
PTPN4P29074 NDUFB4P2-201ENST00000509515 391 ntBASIC2.56□□□□□ -2
PTPN4P29074 Y_RNA.688-201ENST00000516565 95 ntBASIC2.56□□□□□ -2
PTPN4P29074 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.56□□□□□ -2
PTPN4P29074 AC022878.1-201ENST00000530684 149 ntBASIC2.56□□□□□ -2
PTPN4P29074 AP003122.4-201ENST00000530980 758 ntBASIC2.56□□□□□ -2
PTPN4P29074 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.56□□□□□ -2
PTPN4P29074 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC2.56□□□□□ -2
PTPN4P29074 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.56□□□□□ -2
PTPN4P29074 AC012414.6-201ENST00000568241 401 ntBASIC2.56□□□□□ -2
PTPN4P29074 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.56□□□□□ -2
PTPN4P29074 MIR3118-1-201ENST00000581787 76 ntBASIC2.56□□□□□ -2
PTPN4P29074 MIR4635-201ENST00000583759 79 ntBASIC2.56□□□□□ -2
PTPN4P29074 AC104763.2-201ENST00000604179 382 ntBASIC2.56□□□□□ -2
PTPN4P29074 Z94722.1-201ENST00000604328 474 ntBASIC2.56□□□□□ -2
PTPN4P29074 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC2.56□□□□□ -2
PTPN4P29074 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.56□□□□□ -2
PTPN4P29074 AC009878.1-201ENST00000621819 340 ntBASIC2.56□□□□□ -2
PTPN4P29074 AC091953.2-201ENST00000623979 160 ntBASIC2.56□□□□□ -2
PTPN4P29074 AC099654.13-201ENST00000639774 207 ntBASIC2.56□□□□□ -2
PTPN4P29074 ELF2P3-201ENST00000445099 1506 ntBASIC2.56□□□□□ -2
PTPN4P29074 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.56□□□□□ -2
PTPN4P29074 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
PTPN4P29074 RNY4P16-201ENST00000364768 94 ntBASIC2.55□□□□□ -2
PTPN4P29074 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
PTPN4P29074 RNU6-1083P-201ENST00000384022 107 ntBASIC2.55□□□□□ -2
PTPN4P29074 FCF1P10-201ENST00000407590 479 ntBASIC2.55□□□□□ -2
PTPN4P29074 RNA5SP508-201ENST00000411327 119 ntBASIC2.55□□□□□ -2
PTPN4P29074 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.55□□□□□ -2
PTPN4P29074 RPLP0P7-201ENST00000416050 667 ntBASIC2.55□□□□□ -2
PTPN4P29074 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.55□□□□□ -2
PTPN4P29074 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.55□□□□□ -2
PTPN4P29074 FABP5P15-201ENST00000453566 214 ntBASIC2.55□□□□□ -2
PTPN4P29074 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.55□□□□□ -2
PTPN4P29074 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.55□□□□□ -2
PTPN4P29074 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.55□□□□□ -2
PTPN4P29074 EIF4EP3-201ENST00000498782 656 ntBASIC2.55□□□□□ -2
PTPN4P29074 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.55□□□□□ -2
PTPN4P29074 RNU5F-8P-201ENST00000515941 111 ntBASIC2.55□□□□□ -2
PTPN4P29074 AP003181.2-201ENST00000528941 181 ntBASIC2.55□□□□□ -2
PTPN4P29074 MIR3945-201ENST00000581853 98 ntBASIC2.55□□□□□ -2
PTPN4P29074 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.55□□□□□ -2
PTPN4P29074 AC110760.3-201ENST00000598794 467 ntBASIC2.55□□□□□ -2
PTPN4P29074 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.55□□□□□ -2
PTPN4P29074 AL590229.1-201ENST00000603497 542 ntBASIC2.55□□□□□ -2
PTPN4P29074 RNU6-87P-201ENST00000607561 108 ntBASIC2.55□□□□□ -2
PTPN4P29074 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.55□□□□□ -2
PTPN4P29074 AC025048.6-202ENST00000627667 438 ntBASIC2.55□□□□□ -2
PTPN4P29074 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
PTPN4P29074 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
PTPN4P29074 RNA5SP68-201ENST00000363885 119 ntBASIC2.54□□□□□ -2
PTPN4P29074 U3.12-201ENST00000364498 214 ntBASIC2.54□□□□□ -2
PTPN4P29074 RNU1-73P-201ENST00000383971 164 ntBASIC2.54□□□□□ -2
PTPN4P29074 RNU2-49P-201ENST00000410666 184 ntBASIC2.54□□□□□ -2
PTPN4P29074 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.54□□□□□ -2
PTPN4P29074 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.54□□□□□ -2
PTPN4P29074 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.54□□□□□ -2
PTPN4P29074 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.54□□□□□ -2
PTPN4P29074 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.54□□□□□ -2
PTPN4P29074 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.54□□□□□ -2
PTPN4P29074 MTND2P4-201ENST00000445034 1004 ntBASIC2.54□□□□□ -2
PTPN4P29074 TAF9P1-201ENST00000445421 515 ntBASIC2.54□□□□□ -2
PTPN4P29074 AL513328.1-201ENST00000446460 224 ntBASIC2.54□□□□□ -2
PTPN4P29074 SSXP1-201ENST00000453640 473 ntBASIC2.54□□□□□ -2
PTPN4P29074 TAF9P2-201ENST00000454958 515 ntBASIC2.54□□□□□ -2
PTPN4P29074 SNRPGP9-201ENST00000456025 225 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms