Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 MTND5P19-201ENST00000424872 1794 ntBASIC4.81□□□□□ -1.64
ERCC3P19447 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.81□□□□□ -1.64
ERCC3P19447 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ERCC3P19447 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
ERCC3P19447 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
ERCC3P19447 RNU5E-7P-201ENST00000365290 117 ntBASIC4.81□□□□□ -1.64
ERCC3P19447 RNU6-898P-201ENST00000365627 104 ntBASIC4.81□□□□□ -1.64
ERCC3P19447 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
ERCC3P19447 RNU1-73P-201ENST00000383971 164 ntBASIC4.81□□□□□ -1.64
ERCC3P19447 AL030996.1-201ENST00000411430 235 ntBASIC4.81□□□□□ -1.64
ERCC3P19447 SNORD56-201ENST00000413522 71 ntBASIC4.81□□□□□ -1.64
ERCC3P19447 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ERCC3P19447 AC006946.1-201ENST00000429106 328 ntBASIC4.81□□□□□ -1.64
ERCC3P19447 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.81□□□□□ -1.64
ERCC3P19447 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.81□□□□□ -1.64
ERCC3P19447 SNRPEP4-201ENST00000435815 279 ntBASIC4.81□□□□□ -1.64
ERCC3P19447 RPL23AP46-201ENST00000438548 490 ntBASIC4.81□□□□□ -1.64
ERCC3P19447 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC4.81□□□□□ -1.64
ERCC3P19447 RPL26P9-201ENST00000457466 433 ntBASIC4.81□□□□□ -1.64
ERCC3P19447 RNU6-1037P-201ENST00000459571 107 ntBASIC4.81□□□□□ -1.64
ERCC3P19447 AC008571.1-201ENST00000467232 300 ntBASIC4.81□□□□□ -1.64
ERCC3P19447 AC128713.1-201ENST00000471495 306 ntBASIC4.81□□□□□ -1.64
ERCC3P19447 RPL23AP45-201ENST00000476406 468 ntBASIC4.81□□□□□ -1.64
ERCC3P19447 RPS29P19-201ENST00000479709 171 ntBASIC4.81□□□□□ -1.64
ERCC3P19447 UBE2CP3-201ENST00000502715 450 ntBASIC4.81□□□□□ -1.64
ERCC3P19447 AC026782.1-201ENST00000512952 449 ntBASIC4.81□□□□□ -1.64
ERCC3P19447 LINC00933-203ENST00000559812 219 ntBASIC4.81□□□□□ -1.64
ERCC3P19447 AC022655.2-201ENST00000577280 318 ntBASIC4.81□□□□□ -1.64
ERCC3P19447 MIR3609-201ENST00000582661 80 ntBASIC4.81□□□□□ -1.64
ERCC3P19447 MIR6076-201ENST00000617521 113 ntBASIC4.81□□□□□ -1.64
ERCC3P19447 AC103858.2-201ENST00000621471 543 ntBASIC4.81□□□□□ -1.64
ERCC3P19447 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.81□□□□□ -1.64
ERCC3P19447 AC134503.1-201ENST00000633048 54 ntBASIC4.81□□□□□ -1.64
ERCC3P19447 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.81□□□□□ -1.64
ERCC3P19447 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
ERCC3P19447 AC022336.2-201ENST00000568966 2538 ntBASIC4.81□□□□□ -1.64
ERCC3P19447 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.81□□□□□ -1.64
ERCC3P19447 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
ERCC3P19447 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
ERCC3P19447 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
ERCC3P19447 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.8□□□□□ -1.64
ERCC3P19447 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
ERCC3P19447 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
ERCC3P19447 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
ERCC3P19447 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
ERCC3P19447 AC007256.1-201ENST00000392253 2765 ntBASIC4.8□□□□□ -1.64
ERCC3P19447 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
ERCC3P19447 Y_RNA.132-201ENST00000363421 102 ntBASIC4.8□□□□□ -1.64
ERCC3P19447 RNU6-1059P-201ENST00000363752 98 ntBASIC4.8□□□□□ -1.64
ERCC3P19447 SNORD66.1-201ENST00000391230 76 ntBASIC4.8□□□□□ -1.64
ERCC3P19447 MIR548P-201ENST00000408336 84 ntBASIC4.8□□□□□ -1.64
ERCC3P19447 RNU6-325P-201ENST00000411132 105 ntBASIC4.8□□□□□ -1.64
ERCC3P19447 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.8□□□□□ -1.64
ERCC3P19447 HSPE1P12-201ENST00000412576 301 ntBASIC4.8□□□□□ -1.64
ERCC3P19447 AC099548.1-201ENST00000421443 426 ntBASIC4.8□□□□□ -1.64
ERCC3P19447 snoU13.28-201ENST00000459235 104 ntBASIC4.8□□□□□ -1.64
ERCC3P19447 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.8□□□□□ -1.64
ERCC3P19447 RNU6-377P-201ENST00000515965 102 ntBASIC4.8□□□□□ -1.64
ERCC3P19447 SCARNA15.1-201ENST00000516384 125 ntBASIC4.8□□□□□ -1.64
ERCC3P19447 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.8□□□□□ -1.64
ERCC3P19447 TRMT10BP1-201ENST00000519377 943 ntBASIC4.8□□□□□ -1.64
ERCC3P19447 AC107016.1-201ENST00000550463 337 ntBASIC4.8□□□□□ -1.64
ERCC3P19447 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.8□□□□□ -1.64
ERCC3P19447 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.8□□□□□ -1.64
ERCC3P19447 AC103996.1-201ENST00000555468 102 ntBASIC4.8□□□□□ -1.64
ERCC3P19447 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.8□□□□□ -1.64
ERCC3P19447 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.8□□□□□ -1.64
ERCC3P19447 AL606490.9-201ENST00000603331 271 ntBASIC4.8□□□□□ -1.64
ERCC3P19447 Y_RNA.812-201ENST00000610788 101 ntBASIC4.8□□□□□ -1.64
ERCC3P19447 Y_RNA.784-201ENST00000613803 101 ntBASIC4.8□□□□□ -1.64
ERCC3P19447 Y_RNA.787-201ENST00000616522 101 ntBASIC4.8□□□□□ -1.64
ERCC3P19447 Y_RNA.780-201ENST00000617336 101 ntBASIC4.8□□□□□ -1.64
ERCC3P19447 MIR7151-201ENST00000617477 60 ntBASIC4.8□□□□□ -1.64
ERCC3P19447 Y_RNA.801-201ENST00000619005 101 ntBASIC4.8□□□□□ -1.64
ERCC3P19447 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
ERCC3P19447 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.8□□□□□ -1.64
ERCC3P19447 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
ERCC3P19447 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
ERCC3P19447 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
ERCC3P19447 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
ERCC3P19447 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ERCC3P19447 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ERCC3P19447 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.79□□□□□ -1.64
ERCC3P19447 AP001148.1-201ENST00000624124 2359 ntBASIC4.79□□□□□ -1.64
ERCC3P19447 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.79□□□□□ -1.64
ERCC3P19447 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
ERCC3P19447 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
ERCC3P19447 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ERCC3P19447 RPL9P7-201ENST00000330965 580 ntBASIC4.79□□□□□ -1.64
ERCC3P19447 Y_RNA.128-201ENST00000363391 112 ntBASIC4.79□□□□□ -1.64
ERCC3P19447 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ERCC3P19447 RPL26P27-201ENST00000414397 437 ntBASIC4.79□□□□□ -1.64
ERCC3P19447 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC4.79□□□□□ -1.64
ERCC3P19447 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4.79□□□□□ -1.64
ERCC3P19447 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.79□□□□□ -1.64
ERCC3P19447 AL513043.1-201ENST00000439124 535 ntBASIC4.79□□□□□ -1.64
ERCC3P19447 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.79□□□□□ -1.64
ERCC3P19447 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ERCC3P19447 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.79□□□□□ -1.64
ERCC3P19447 RPL9P9-202ENST00000466501 579 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms