Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
ATF4P18848 RNU6-985P-201ENST00000410182 104 ntBASIC4.06□□□□□ -1.76
ATF4P18848 RNA5SP390-201ENST00000410191 113 ntBASIC4.06□□□□□ -1.76
ATF4P18848 RNU2-49P-201ENST00000410666 184 ntBASIC4.06□□□□□ -1.76
ATF4P18848 RN7SKP216-201ENST00000411050 312 ntBASIC4.06□□□□□ -1.76
ATF4P18848 AC096649.2-201ENST00000416186 393 ntBASIC4.06□□□□□ -1.76
ATF4P18848 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.06□□□□□ -1.76
ATF4P18848 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.06□□□□□ -1.76
ATF4P18848 SETP5-201ENST00000437270 562 ntBASIC4.06□□□□□ -1.76
ATF4P18848 AC007969.2-201ENST00000441891 191 ntBASIC4.06□□□□□ -1.76
ATF4P18848 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.06□□□□□ -1.76
ATF4P18848 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC4.06□□□□□ -1.76
ATF4P18848 RNU7-175P-201ENST00000515915 61 ntBASIC4.06□□□□□ -1.76
ATF4P18848 SNORA70.14-201ENST00000516205 110 ntBASIC4.06□□□□□ -1.76
ATF4P18848 Y_RNA.721-201ENST00000517207 102 ntBASIC4.06□□□□□ -1.76
ATF4P18848 IGLV3-26-201ENST00000520756 302 ntBASIC4.06□□□□□ -1.76
ATF4P18848 AP004607.2-201ENST00000533949 322 ntBASIC4.06□□□□□ -1.76
ATF4P18848 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC4.06□□□□□ -1.76
ATF4P18848 AP006289.1-201ENST00000538089 277 ntBASIC4.06□□□□□ -1.76
ATF4P18848 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.06□□□□□ -1.76
ATF4P18848 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.06□□□□□ -1.76
ATF4P18848 MIR5701-3-201ENST00000578890 82 ntBASIC4.06□□□□□ -1.76
ATF4P18848 MIR5701-1-201ENST00000585138 82 ntBASIC4.06□□□□□ -1.76
ATF4P18848 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.06□□□□□ -1.76
ATF4P18848 AL512329.2-201ENST00000607350 548 ntBASIC4.06□□□□□ -1.76
ATF4P18848 MIR5701-2-201ENST00000615634 82 ntBASIC4.06□□□□□ -1.76
ATF4P18848 AL162373.1-201ENST00000620433 407 ntBASIC4.06□□□□□ -1.76
ATF4P18848 MIR4727-201ENST00000622232 55 ntBASIC4.06□□□□□ -1.76
ATF4P18848 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC4.06□□□□□ -1.76
ATF4P18848 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ATF4P18848 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ATF4P18848 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
ATF4P18848 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.06□□□□□ -1.76
ATF4P18848 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
ATF4P18848 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.05□□□□□ -1.76
ATF4P18848 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
ATF4P18848 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
ATF4P18848 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
ATF4P18848 AC008669.1-201ENST00000565823 2178 ntBASIC4.05□□□□□ -1.76
ATF4P18848 RN7SKP115-201ENST00000363177 317 ntBASIC4.05□□□□□ -1.76
ATF4P18848 RNU1-105P-201ENST00000363470 161 ntBASIC4.05□□□□□ -1.76
ATF4P18848 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
ATF4P18848 Y_RNA.424-201ENST00000384063 103 ntBASIC4.05□□□□□ -1.76
ATF4P18848 RNU6-968P-201ENST00000384076 107 ntBASIC4.05□□□□□ -1.76
ATF4P18848 RNU6-748P-201ENST00000384648 107 ntBASIC4.05□□□□□ -1.76
ATF4P18848 U3.32-201ENST00000408116 212 ntBASIC4.05□□□□□ -1.76
ATF4P18848 AL590139.1-201ENST00000416267 400 ntBASIC4.05□□□□□ -1.76
ATF4P18848 AC113618.1-201ENST00000416747 285 ntBASIC4.05□□□□□ -1.76
ATF4P18848 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.05□□□□□ -1.76
ATF4P18848 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC4.05□□□□□ -1.76
ATF4P18848 GAPDHP25-201ENST00000447061 1001 ntBASIC4.05□□□□□ -1.76
ATF4P18848 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.05□□□□□ -1.76
ATF4P18848 AC104564.1-201ENST00000493028 407 ntBASIC4.05□□□□□ -1.76
ATF4P18848 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC4.05□□□□□ -1.76
ATF4P18848 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC4.05□□□□□ -1.76
ATF4P18848 IGHVII-53-1-201ENST00000519538 255 ntBASIC4.05□□□□□ -1.76
ATF4P18848 AC091144.1-201ENST00000519573 138 ntBASIC4.05□□□□□ -1.76
ATF4P18848 CKS1BP7-201ENST00000522230 235 ntBASIC4.05□□□□□ -1.76
ATF4P18848 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.05□□□□□ -1.76
ATF4P18848 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC4.05□□□□□ -1.76
ATF4P18848 RN7SL708P-201ENST00000580952 299 ntBASIC4.05□□□□□ -1.76
ATF4P18848 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
ATF4P18848 AC020914.4-201ENST00000597690 277 ntBASIC4.05□□□□□ -1.76
ATF4P18848 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC4.05□□□□□ -1.76
ATF4P18848 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC4.05□□□□□ -1.76
ATF4P18848 AC018445.2-201ENST00000622987 260 ntBASIC4.05□□□□□ -1.76
ATF4P18848 AL078596.1-201ENST00000624856 447 ntBASIC4.05□□□□□ -1.76
ATF4P18848 AC074101.1-201ENST00000637861 241 ntBASIC4.05□□□□□ -1.76
ATF4P18848 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
ATF4P18848 AL353746.1-201ENST00000566293 6881 ntBASIC4.04□□□□□ -1.76
ATF4P18848 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ATF4P18848 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ATF4P18848 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
ATF4P18848 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
ATF4P18848 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
ATF4P18848 MIR223-201ENST00000385204 110 ntBASIC4.04□□□□□ -1.76
ATF4P18848 SNRPGP7-201ENST00000469016 106 ntBASIC4.04□□□□□ -1.76
ATF4P18848 RN7SL547P-201ENST00000490793 290 ntBASIC4.04□□□□□ -1.76
ATF4P18848 AC231760.1-201ENST00000498002 260 ntBASIC4.04□□□□□ -1.76
ATF4P18848 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC4.04□□□□□ -1.76
ATF4P18848 RNU6-764P-201ENST00000516396 105 ntBASIC4.04□□□□□ -1.76
ATF4P18848 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
ATF4P18848 AC100770.1-201ENST00000532310 322 ntBASIC4.04□□□□□ -1.76
ATF4P18848 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.04□□□□□ -1.76
ATF4P18848 AC007375.1-201ENST00000554513 578 ntBASIC4.04□□□□□ -1.76
ATF4P18848 DNAJC8P1-201ENST00000554535 372 ntBASIC4.04□□□□□ -1.76
ATF4P18848 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.04□□□□□ -1.76
ATF4P18848 AC091152.3-201ENST00000604227 325 ntBASIC4.04□□□□□ -1.76
ATF4P18848 MIR1244-1-201ENST00000612829 85 ntBASIC4.04□□□□□ -1.76
ATF4P18848 AC103858.2-201ENST00000621471 543 ntBASIC4.04□□□□□ -1.76
ATF4P18848 MIR6730-201ENST00000622213 67 ntBASIC4.04□□□□□ -1.76
ATF4P18848 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC4.04□□□□□ -1.76
ATF4P18848 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.04□□□□□ -1.76
ATF4P18848 MPP6-209ENST00000625307 126 ntTSL 5 BASIC4.04□□□□□ -1.76
ATF4P18848 MIR1244-3-201ENST00000635744 85 ntBASIC4.04□□□□□ -1.76
ATF4P18848 MIR1244-2-201ENST00000636449 85 ntBASIC4.04□□□□□ -1.76
ATF4P18848 MIR1244-4-202ENST00000636813 85 ntBASIC4.04□□□□□ -1.76
ATF4P18848 AC010889.1-201ENST00000566193 2666 ntBASIC4.04□□□□□ -1.76
ATF4P18848 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.04□□□□□ -1.76
ATF4P18848 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms