Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.12□□□□□ -2.23
FREM3P0C091 RNU1-62P-201ENST00000362599 164 ntBASIC1.12□□□□□ -2.23
FREM3P0C091 Y_RNA.205-201ENST00000364128 113 ntBASIC1.12□□□□□ -2.23
FREM3P0C091 RNU6-342P-201ENST00000384521 104 ntBASIC1.12□□□□□ -2.23
FREM3P0C091 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC1.12□□□□□ -2.23
FREM3P0C091 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.12□□□□□ -2.23
FREM3P0C091 AC107953.1-201ENST00000522216 297 ntBASIC1.12□□□□□ -2.23
FREM3P0C091 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC1.12□□□□□ -2.23
FREM3P0C091 AC005951.2-201ENST00000576282 495 ntBASIC1.12□□□□□ -2.23
FREM3P0C091 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC1.12□□□□□ -2.23
FREM3P0C091 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC1.12□□□□□ -2.23
FREM3P0C091 AC073413.2-201ENST00000604332 360 ntBASIC1.12□□□□□ -2.23
FREM3P0C091 KATNBL1P5-201ENST00000605015 517 ntBASIC1.12□□□□□ -2.23
FREM3P0C091 AL590396.4-201ENST00000636779 956 ntBASIC1.12□□□□□ -2.23
FREM3P0C091 LINC02211-204ENST00000642024 1070 ntBASIC1.12□□□□□ -2.23
FREM3P0C091 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
FREM3P0C091 CCNG1P1-201ENST00000406783 885 ntBASIC1.11□□□□□ -2.23
FREM3P0C091 MED14P1-201ENST00000430517 648 ntBASIC1.11□□□□□ -2.23
FREM3P0C091 AL365400.1-201ENST00000431854 640 ntBASIC1.11□□□□□ -2.23
FREM3P0C091 AP000949.1-201ENST00000438328 629 ntBASIC1.11□□□□□ -2.23
FREM3P0C091 MTCO1P53-201ENST00000441633 699 ntBASIC1.11□□□□□ -2.23
FREM3P0C091 AC022880.1-201ENST00000534017 973 ntBASIC1.11□□□□□ -2.23
FREM3P0C091 DUXAP1-201ENST00000556632 463 ntBASIC1.11□□□□□ -2.23
FREM3P0C091 MTCYBP23-201ENST00000558717 1102 ntBASIC1.11□□□□□ -2.23
FREM3P0C091 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.11□□□□□ -2.23
FREM3P0C091 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.11□□□□□ -2.23
FREM3P0C091 MIR4637-201ENST00000582405 84 ntBASIC1.11□□□□□ -2.23
FREM3P0C091 AP002906.1-201ENST00000603405 233 ntBASIC1.11□□□□□ -2.23
FREM3P0C091 AL139344.1-201ENST00000605228 195 ntBASIC1.11□□□□□ -2.23
FREM3P0C091 AC068276.1-201ENST00000605793 379 ntBASIC1.11□□□□□ -2.23
FREM3P0C091 AL158211.4-201ENST00000606988 584 ntBASIC1.11□□□□□ -2.23
FREM3P0C091 AL138478.1-201ENST00000612252 832 ntBASIC1.11□□□□□ -2.23
FREM3P0C091 uc_338.12-201ENST00000616344 181 ntBASIC1.11□□□□□ -2.23
FREM3P0C091 AC109809.1-201ENST00000619665 545 ntBASIC1.11□□□□□ -2.23
FREM3P0C091 AC084824.4-201ENST00000620106 731 ntBASIC1.11□□□□□ -2.23
FREM3P0C091 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
FREM3P0C091 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.11□□□□□ -2.23
FREM3P0C091 MIR758-201ENST00000390227 88 ntBASIC1.1□□□□□ -2.23
FREM3P0C091 AC093155.1-201ENST00000440164 826 ntBASIC1.1□□□□□ -2.23
FREM3P0C091 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.1□□□□□ -2.23
FREM3P0C091 MTND6P13-201ENST00000443510 523 ntBASIC1.1□□□□□ -2.23
FREM3P0C091 RPL21P134-201ENST00000453468 483 ntBASIC1.1□□□□□ -2.23
FREM3P0C091 AC026410.2-201ENST00000460281 156 ntBASIC1.1□□□□□ -2.23
FREM3P0C091 AC026801.1-201ENST00000497178 464 ntBASIC1.1□□□□□ -2.23
FREM3P0C091 HMGB3P17-201ENST00000504195 649 ntBASIC1.1□□□□□ -2.23
FREM3P0C091 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.1□□□□□ -2.23
FREM3P0C091 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.1□□□□□ -2.23
FREM3P0C091 AC135279.1-201ENST00000543493 504 ntBASIC1.1□□□□□ -2.23
FREM3P0C091 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.1□□□□□ -2.23
FREM3P0C091 AL731537.2-201ENST00000561565 951 ntBASIC1.1□□□□□ -2.23
FREM3P0C091 AC012435.1-202ENST00000568772 240 ntBASIC1.1□□□□□ -2.23
FREM3P0C091 AC138915.2-201ENST00000569776 97 ntBASIC1.1□□□□□ -2.23
FREM3P0C091 AP001033.2-201ENST00000609701 1003 ntBASIC1.1□□□□□ -2.23
FREM3P0C091 U2.21-201ENST00000637295 81 ntBASIC1.1□□□□□ -2.23
FREM3P0C091 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
FREM3P0C091 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
FREM3P0C091 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
FREM3P0C091 RNU6-839P-201ENST00000363347 108 ntBASIC1.1□□□□□ -2.23
FREM3P0C091 CISD1P1-201ENST00000393907 327 ntBASIC1.1□□□□□ -2.23
FREM3P0C091 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.1□□□□□ -2.23
FREM3P0C091 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.1□□□□□ -2.23
FREM3P0C091 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.1□□□□□ -2.23
FREM3P0C091 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.1□□□□□ -2.23
FREM3P0C091 AL096803.2-201ENST00000450032 677 ntBASIC1.1□□□□□ -2.23
FREM3P0C091 TOMM22P6-201ENST00000465035 409 ntBASIC1.1□□□□□ -2.23
FREM3P0C091 AL121769.1-201ENST00000469473 401 ntBASIC1.1□□□□□ -2.23
FREM3P0C091 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.1□□□□□ -2.23
FREM3P0C091 RNA5SP290-201ENST00000517133 127 ntBASIC1.1□□□□□ -2.23
FREM3P0C091 AC084364.2-201ENST00000546924 395 ntBASIC1.1□□□□□ -2.23
FREM3P0C091 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.1□□□□□ -2.23
FREM3P0C091 AC005034.5-201ENST00000604219 466 ntBASIC1.1□□□□□ -2.23
FREM3P0C091 AC024257.5-201ENST00000612739 531 ntBASIC1.1□□□□□ -2.23
FREM3P0C091 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.1□□□□□ -2.23
FREM3P0C091 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.1□□□□□ -2.23
FREM3P0C091 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
FREM3P0C091 Y_RNA.224-201ENST00000364308 111 ntBASIC1.09□□□□□ -2.23
FREM3P0C091 MIR676-201ENST00000390702 67 ntBASIC1.09□□□□□ -2.23
FREM3P0C091 SNORD65C-201ENST00000390962 71 ntBASIC1.09□□□□□ -2.23
FREM3P0C091 AL356432.1-201ENST00000405809 419 ntBASIC1.09□□□□□ -2.23
FREM3P0C091 MIR1302-8-201ENST00000408342 128 ntBASIC1.09□□□□□ -2.23
FREM3P0C091 AC007742.1-201ENST00000425789 329 ntBASIC1.09□□□□□ -2.23
FREM3P0C091 ELOCP26-201ENST00000436067 329 ntBASIC1.09□□□□□ -2.23
FREM3P0C091 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
FREM3P0C091 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.09□□□□□ -2.23
FREM3P0C091 AC007395.1-201ENST00000451333 677 ntBASIC1.09□□□□□ -2.23
FREM3P0C091 RPL23AP3-201ENST00000453844 468 ntBASIC1.09□□□□□ -2.23
FREM3P0C091 AC027575.1-201ENST00000481064 460 ntBASIC1.09□□□□□ -2.23
FREM3P0C091 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.09□□□□□ -2.23
FREM3P0C091 MTCYBP22-201ENST00000603788 447 ntBASIC1.09□□□□□ -2.23
FREM3P0C091 AL121652.1-201ENST00000608851 448 ntBASIC1.09□□□□□ -2.23
FREM3P0C091 AC091304.6-201ENST00000619761 202 ntBASIC1.09□□□□□ -2.23
FREM3P0C091 AC099842.1-201ENST00000619919 596 ntBASIC1.09□□□□□ -2.23
FREM3P0C091 AL359740.1-201ENST00000624340 592 ntBASIC1.09□□□□□ -2.23
FREM3P0C091 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.09□□□□□ -2.23
FREM3P0C091 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.09□□□□□ -2.23
FREM3P0C091 AL356473.1-201ENST00000406203 1408 ntBASIC1.09□□□□□ -2.23
FREM3P0C091 ZNF702P-202ENST00000434269 1966 ntBASIC1.09□□□□□ -2.24
FREM3P0C091 AL033519.2-201ENST00000403958 392 ntBASIC1.09□□□□□ -2.24
FREM3P0C091 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.09□□□□□ -2.24
FREM3P0C091 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.09□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms