Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AC011005.2-201ENST00000487324 359 ntBASIC1.86□□□□□ -2.11
TPM1P09493 AC104685.1-201ENST00000502445 371 ntBASIC1.86□□□□□ -2.11
TPM1P09493 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
TPM1P09493 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1.86□□□□□ -2.11
TPM1P09493 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.86□□□□□ -2.11
TPM1P09493 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC1.86□□□□□ -2.11
TPM1P09493 CBX3P4-201ENST00000538909 354 ntBASIC1.86□□□□□ -2.11
TPM1P09493 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC1.86□□□□□ -2.11
TPM1P09493 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC1.86□□□□□ -2.11
TPM1P09493 AC087241.4-201ENST00000612441 480 ntBASIC1.86□□□□□ -2.11
TPM1P09493 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC1.86□□□□□ -2.11
TPM1P09493 Z99571.1-201ENST00000636677 394 ntBASIC1.86□□□□□ -2.11
TPM1P09493 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.86□□□□□ -2.11
TPM1P09493 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.85□□□□□ -2.11
TPM1P09493 UBE2L2-201ENST00000254302 429 ntBASIC1.85□□□□□ -2.11
TPM1P09493 U8.3-201ENST00000363321 132 ntBASIC1.85□□□□□ -2.11
TPM1P09493 Y_RNA.510-201ENST00000384511 114 ntBASIC1.85□□□□□ -2.11
TPM1P09493 RN7SKP192-201ENST00000411291 327 ntBASIC1.85□□□□□ -2.11
TPM1P09493 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.85□□□□□ -2.11
TPM1P09493 MTND2P29-201ENST00000438595 412 ntBASIC1.85□□□□□ -2.11
TPM1P09493 AC003989.2-201ENST00000440224 169 ntBASIC1.85□□□□□ -2.11
TPM1P09493 RPL7P36-201ENST00000444633 681 ntBASIC1.85□□□□□ -2.11
TPM1P09493 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.85□□□□□ -2.11
TPM1P09493 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC1.85□□□□□ -2.11
TPM1P09493 AC087884.1-201ENST00000469738 328 ntBASIC1.85□□□□□ -2.11
TPM1P09493 AC139453.3-201ENST00000493276 369 ntBASIC1.85□□□□□ -2.11
TPM1P09493 AC069306.1-201ENST00000507006 843 ntBASIC1.85□□□□□ -2.11
TPM1P09493 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC1.85□□□□□ -2.11
TPM1P09493 RNA5SP182-201ENST00000516064 82 ntBASIC1.85□□□□□ -2.11
TPM1P09493 RNU6-150P-201ENST00000516237 95 ntBASIC1.85□□□□□ -2.11
TPM1P09493 RNU6-1183P-201ENST00000517054 60 ntBASIC1.85□□□□□ -2.11
TPM1P09493 ACA59.2-201ENST00000517061 156 ntBASIC1.85□□□□□ -2.11
TPM1P09493 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.85□□□□□ -2.11
TPM1P09493 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.85□□□□□ -2.11
TPM1P09493 NDUFA5P6-201ENST00000542110 379 ntBASIC1.85□□□□□ -2.11
TPM1P09493 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.85□□□□□ -2.11
TPM1P09493 MIR4435-1-201ENST00000582552 80 ntBASIC1.85□□□□□ -2.11
TPM1P09493 MIR4672-201ENST00000583126 81 ntBASIC1.85□□□□□ -2.11
TPM1P09493 BNIP3P25-201ENST00000596023 559 ntBASIC1.85□□□□□ -2.11
TPM1P09493 AC008121.3-201ENST00000618726 433 ntBASIC1.85□□□□□ -2.11
TPM1P09493 AC068880.4-201ENST00000623082 495 ntBASIC1.85□□□□□ -2.11
TPM1P09493 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
TPM1P09493 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.85□□□□□ -2.11
TPM1P09493 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
TPM1P09493 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
TPM1P09493 RNU6-512P-201ENST00000364438 103 ntBASIC1.84□□□□□ -2.11
TPM1P09493 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC1.84□□□□□ -2.11
TPM1P09493 RNA5SP212-201ENST00000391223 107 ntBASIC1.84□□□□□ -2.11
TPM1P09493 AL591034.2-201ENST00000402839 359 ntBASIC1.84□□□□□ -2.11
TPM1P09493 SNORA3.2-201ENST00000408221 125 ntBASIC1.84□□□□□ -2.11
TPM1P09493 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.84□□□□□ -2.11
TPM1P09493 KATNBL1P6-201ENST00000453433 915 ntBASIC1.84□□□□□ -2.11
TPM1P09493 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC1.84□□□□□ -2.11
TPM1P09493 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.84□□□□□ -2.11
TPM1P09493 RNY4P37-201ENST00000516225 96 ntBASIC1.84□□□□□ -2.11
TPM1P09493 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.84□□□□□ -2.11
TPM1P09493 DEFB131D-201ENST00000526803 184 ntBASIC1.84□□□□□ -2.11
TPM1P09493 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.84□□□□□ -2.11
TPM1P09493 HSBP1P1-201ENST00000555205 166 ntBASIC1.84□□□□□ -2.11
TPM1P09493 PSMA3P-201ENST00000555485 635 ntBASIC1.84□□□□□ -2.11
TPM1P09493 AC110588.1-201ENST00000559699 137 ntBASIC1.84□□□□□ -2.11
TPM1P09493 SEPT7P9-203ENST00000604116 343 ntBASIC1.84□□□□□ -2.11
TPM1P09493 MIR6134-201ENST00000617606 109 ntBASIC1.84□□□□□ -2.11
TPM1P09493 AC017037.3-201ENST00000625016 472 ntBASIC1.84□□□□□ -2.11
TPM1P09493 AP000776.1-201ENST00000530032 1663 ntBASIC1.83□□□□□ -2.12
TPM1P09493 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.83□□□□□ -2.12
TPM1P09493 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
TPM1P09493 MIR9-3-201ENST00000385084 90 ntBASIC1.83□□□□□ -2.12
TPM1P09493 TIMM9P2-201ENST00000419324 266 ntBASIC1.83□□□□□ -2.12
TPM1P09493 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC1.83□□□□□ -2.12
TPM1P09493 AL137159.1-201ENST00000452808 512 ntBASIC1.83□□□□□ -2.12
TPM1P09493 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.83□□□□□ -2.12
TPM1P09493 RPS29P11-201ENST00000496507 171 ntBASIC1.83□□□□□ -2.12
TPM1P09493 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.83□□□□□ -2.12
TPM1P09493 AC096745.1-201ENST00000509945 370 ntBASIC1.83□□□□□ -2.12
TPM1P09493 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.83□□□□□ -2.12
TPM1P09493 AC024589.1-201ENST00000512207 263 ntBASIC1.83□□□□□ -2.12
TPM1P09493 AC021451.1-201ENST00000523498 1129 ntBASIC1.83□□□□□ -2.12
TPM1P09493 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC1.83□□□□□ -2.12
TPM1P09493 GNAI2P1-201ENST00000541815 315 ntBASIC1.83□□□□□ -2.12
TPM1P09493 MIR4713-201ENST00000582691 75 ntBASIC1.83□□□□□ -2.12
TPM1P09493 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC1.83□□□□□ -2.12
TPM1P09493 UBE2L4-201ENST00000587688 464 ntBASIC1.83□□□□□ -2.12
TPM1P09493 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.83□□□□□ -2.12
TPM1P09493 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.83□□□□□ -2.12
TPM1P09493 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.83□□□□□ -2.12
TPM1P09493 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.83□□□□□ -2.12
TPM1P09493 snoZ40.1-201ENST00000364540 72 ntBASIC1.82□□□□□ -2.12
TPM1P09493 UBE2V1P2-201ENST00000397758 440 ntBASIC1.82□□□□□ -2.12
TPM1P09493 POLHP1-201ENST00000411806 470 ntBASIC1.82□□□□□ -2.12
TPM1P09493 BTBD7P2-201ENST00000441962 620 ntBASIC1.82□□□□□ -2.12
TPM1P09493 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.82□□□□□ -2.12
TPM1P09493 AC116655.1-201ENST00000508324 901 ntBASIC1.82□□□□□ -2.12
TPM1P09493 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.82□□□□□ -2.12
TPM1P09493 AC008549.1-201ENST00000512900 643 ntBASIC1.82□□□□□ -2.12
TPM1P09493 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.82□□□□□ -2.12
TPM1P09493 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC1.82□□□□□ -2.12
TPM1P09493 AL133153.1-201ENST00000557756 303 ntBASIC1.82□□□□□ -2.12
TPM1P09493 AC022254.1-201ENST00000567857 235 ntBASIC1.82□□□□□ -2.12
TPM1P09493 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms