Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 RNU6-1256P-201ENST00000516539 103 ntBASIC3.33□□□□□ -1.88
MMP3P08254 RNU6-358P-201ENST00000516564 75 ntBASIC3.33□□□□□ -1.88
MMP3P08254 NRON-201ENST00000517270 370 ntBASIC3.33□□□□□ -1.88
MMP3P08254 OR5BN1P-201ENST00000532955 829 ntBASIC3.33□□□□□ -1.88
MMP3P08254 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.33□□□□□ -1.88
MMP3P08254 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.33□□□□□ -1.88
MMP3P08254 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.33□□□□□ -1.88
MMP3P08254 MIR4703-201ENST00000577728 79 ntBASIC3.33□□□□□ -1.88
MMP3P08254 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.33□□□□□ -1.88
MMP3P08254 AC060780.3-201ENST00000589464 80 ntBASIC3.33□□□□□ -1.88
MMP3P08254 AC010525.2-201ENST00000590920 195 ntBASIC3.33□□□□□ -1.88
MMP3P08254 U1.23-201ENST00000610293 146 ntBASIC3.33□□□□□ -1.88
MMP3P08254 AL591516.1-201ENST00000611326 274 ntBASIC3.33□□□□□ -1.88
MMP3P08254 RNU1-68P-201ENST00000615382 146 ntBASIC3.33□□□□□ -1.88
MMP3P08254 U1.39-201ENST00000621562 146 ntBASIC3.33□□□□□ -1.88
MMP3P08254 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.33□□□□□ -1.88
MMP3P08254 PLCE1P1-201ENST00000622094 305 ntBASIC3.33□□□□□ -1.88
MMP3P08254 AC009033.1-201ENST00000624279 431 ntBASIC3.33□□□□□ -1.88
MMP3P08254 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.33□□□□□ -1.88
MMP3P08254 ASNSP3-201ENST00000451989 1306 ntBASIC3.33□□□□□ -1.88
MMP3P08254 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
MMP3P08254 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
MMP3P08254 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
MMP3P08254 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.33□□□□□ -1.88
MMP3P08254 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
MMP3P08254 ZNF826P-207ENST00000622273 1910 ntBASIC3.32□□□□□ -1.88
MMP3P08254 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
MMP3P08254 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
MMP3P08254 SNORA51.2-201ENST00000364595 132 ntBASIC3.32□□□□□ -1.88
MMP3P08254 RNU4-20P-201ENST00000365601 151 ntBASIC3.32□□□□□ -1.88
MMP3P08254 RNU6-190P-201ENST00000384154 102 ntBASIC3.32□□□□□ -1.88
MMP3P08254 RNU6-903P-201ENST00000391270 109 ntBASIC3.32□□□□□ -1.88
MMP3P08254 AL139397.2-201ENST00000404529 772 ntBASIC3.32□□□□□ -1.88
MMP3P08254 RPL27AP8-201ENST00000424277 446 ntBASIC3.32□□□□□ -1.88
MMP3P08254 AC105272.1-201ENST00000438604 198 ntBASIC3.32□□□□□ -1.88
MMP3P08254 RPL37P4-201ENST00000448908 268 ntBASIC3.32□□□□□ -1.88
MMP3P08254 MTCYBP18-201ENST00000501056 747 ntBASIC3.32□□□□□ -1.88
MMP3P08254 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.32□□□□□ -1.88
MMP3P08254 AC018710.1-201ENST00000506509 158 ntBASIC3.32□□□□□ -1.88
MMP3P08254 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.32□□□□□ -1.88
MMP3P08254 AC098799.2-201ENST00000509466 868 ntBASIC3.32□□□□□ -1.88
MMP3P08254 AC025465.4-201ENST00000513422 638 ntBASIC3.32□□□□□ -1.88
MMP3P08254 SCGB1D5P-201ENST00000515134 247 ntBASIC3.32□□□□□ -1.88
MMP3P08254 Y_RNA.689-201ENST00000516589 107 ntBASIC3.32□□□□□ -1.88
MMP3P08254 RN7SKP258-201ENST00000517151 304 ntBASIC3.32□□□□□ -1.88
MMP3P08254 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.32□□□□□ -1.88
MMP3P08254 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.32□□□□□ -1.88
MMP3P08254 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.32□□□□□ -1.88
MMP3P08254 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.32□□□□□ -1.88
MMP3P08254 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
MMP3P08254 ELOCP29-201ENST00000588193 334 ntBASIC3.32□□□□□ -1.88
MMP3P08254 BDH2P1-201ENST00000602288 736 ntBASIC3.32□□□□□ -1.88
MMP3P08254 AC012409.4-201ENST00000612923 249 ntBASIC3.32□□□□□ -1.88
MMP3P08254 AC007318.2-201ENST00000620999 243 ntBASIC3.32□□□□□ -1.88
MMP3P08254 MIR4275-201ENST00000636486 87 ntBASIC3.32□□□□□ -1.88
MMP3P08254 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
MMP3P08254 MTND5P17-201ENST00000418405 1603 ntBASIC3.32□□□□□ -1.88
MMP3P08254 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.32□□□□□ -1.88
MMP3P08254 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
MMP3P08254 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.32□□□□□ -1.88
MMP3P08254 AC233263.6-201ENST00000631132 1963 ntBASIC3.32□□□□□ -1.88
MMP3P08254 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.32□□□□□ -1.88
MMP3P08254 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.32□□□□□ -1.88
MMP3P08254 AC010733.2-201ENST00000589496 5702 ntBASIC3.32□□□□□ -1.88
MMP3P08254 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
MMP3P08254 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
MMP3P08254 DEFB108F-201ENST00000344638 222 ntBASIC3.31□□□□□ -1.88
MMP3P08254 FTLP6-201ENST00000355274 422 ntBASIC3.31□□□□□ -1.88
MMP3P08254 RNU6-1287P-201ENST00000362914 107 ntBASIC3.31□□□□□ -1.88
MMP3P08254 SNORA18.3-201ENST00000384122 132 ntBASIC3.31□□□□□ -1.88
MMP3P08254 RNU6-1060P-201ENST00000384664 107 ntBASIC3.31□□□□□ -1.88
MMP3P08254 MT-TL1-201ENST00000386347 75 ntBASIC3.31□□□□□ -1.88
MMP3P08254 AL356776.1-201ENST00000406574 447 ntBASIC3.31□□□□□ -1.88
MMP3P08254 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.31□□□□□ -1.88
MMP3P08254 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.31□□□□□ -1.88
MMP3P08254 RPS24P13-201ENST00000442520 397 ntBASIC3.31□□□□□ -1.88
MMP3P08254 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.31□□□□□ -1.88
MMP3P08254 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.31□□□□□ -1.88
MMP3P08254 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.31□□□□□ -1.88
MMP3P08254 RPS20P20-201ENST00000460498 340 ntBASIC3.31□□□□□ -1.88
MMP3P08254 RPL7P5-201ENST00000471472 736 ntBASIC3.31□□□□□ -1.88
MMP3P08254 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.31□□□□□ -1.88
MMP3P08254 RNA5SP471-201ENST00000516971 106 ntBASIC3.31□□□□□ -1.88
MMP3P08254 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.31□□□□□ -1.88
MMP3P08254 IGHV3-76-201ENST00000522465 295 ntBASIC3.31□□□□□ -1.88
MMP3P08254 AL121579.1-201ENST00000555129 305 ntBASIC3.31□□□□□ -1.88
MMP3P08254 AC008521.1-201ENST00000587471 187 ntBASIC3.31□□□□□ -1.88
MMP3P08254 AC002545.1-201ENST00000592511 181 ntBASIC3.31□□□□□ -1.88
MMP3P08254 AL670379.4-201ENST00000605279 254 ntBASIC3.31□□□□□ -1.88
MMP3P08254 AC006023.2-201ENST00000609916 167 ntBASIC3.31□□□□□ -1.88
MMP3P08254 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
MMP3P08254 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.31□□□□□ -1.88
MMP3P08254 DUXAP9-208ENST00000622815 614 ntBASIC3.31□□□□□ -1.88
MMP3P08254 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.31□□□□□ -1.88
MMP3P08254 FAM35BP-202ENST00000497389 3337 ntBASIC3.31□□□□□ -1.88
MMP3P08254 SRP72P2-201ENST00000344851 1979 ntBASIC3.31□□□□□ -1.88
MMP3P08254 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
MMP3P08254 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.3□□□□□ -1.88
MMP3P08254 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
MMP3P08254 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 137 ms