| MT1A | P04731 | AC242498.1-201 | ENST00000604134 | 111 nt | BASIC | 0.09 | □□□□□ -2.4 | | |
| MT1A | P04731 | BX322635.1-201 | ENST00000605804 | 496 nt | BASIC | 0.09 | □□□□□ -2.4 | | |
| MT1A | P04731 | AC006270.3-201 | ENST00000605967 | 1036 nt | BASIC | 0.09 | □□□□□ -2.4 | | |
| MT1A | P04731 | MIR98-201 | ENST00000606724 | 119 nt | BASIC | 0.09 | □□□□□ -2.4 | | |
| MT1A | P04731 | AC097717.1-249 | ENST00000608040 | 401 nt | TSL 5 BASIC | 0.09 | □□□□□ -2.4 | | |
| MT1A | P04731 | AC009229.3-201 | ENST00000608056 | 282 nt | BASIC | 0.09 | □□□□□ -2.4 | | |
| MT1A | P04731 | DLEU1_2.1-201 | ENST00000617920 | 342 nt | BASIC | 0.09 | □□□□□ -2.4 | | |
| MT1A | P04731 | AC007742.2-201 | ENST00000618226 | 398 nt | BASIC | 0.09 | □□□□□ -2.4 | | |
| MT1A | P04731 | AC243994.1-201 | ENST00000618627 | 109 nt | BASIC | 0.09 | □□□□□ -2.4 | | |
| MT1A | P04731 | AC027309.3-201 | ENST00000623419 | 351 nt | BASIC | 0.09 | □□□□□ -2.4 | | |
| MT1A | P04731 | AC018692.1-202 | ENST00000623559 | 676 nt | TSL 5 BASIC | 0.09 | □□□□□ -2.4 | | |
| MT1A | P04731 | AC015726.3-201 | ENST00000624501 | 418 nt | BASIC | 0.09 | □□□□□ -2.4 | | |
| MT1A | P04731 | HMHB1-202 | ENST00000638299 | 126 nt | APPRIS P2 TSL 1 (best) BASIC | 0.09 | □□□□□ -2.4 | | |
| MT1A | P04731 | LINC01938-201 | ENST00000521341 | 1864 nt | TSL 2 BASIC | 0.09 | □□□□□ -2.4 | | |
| MT1A | P04731 | DDX43P2-201 | ENST00000604753 | 1354 nt | BASIC | 0.08 | □□□□□ -2.4 | | |
| MT1A | P04731 | ECT2-211 | ENST00000441497 | 2825 nt | APPRIS P2 TSL 1 (best) BASIC | 0.08 | □□□□□ -2.4 | | |
| MT1A | P04731 | C9orf84-205 | ENST00000394779 | 5060 nt | APPRIS ALT2 TSL 2 BASIC | 0.08 | □□□□□ -2.4 | | |
| MT1A | P04731 | C1D-201 | ENST00000355848 | 2233 nt | APPRIS P1 TSL 1 (best) BASIC | 0.08 | □□□□□ -2.4 | | |
| MT1A | P04731 | ZBTB8OS-201 | ENST00000341885 | 312 nt | TSL 1 (best) BASIC | 0.08 | □□□□□ -2.4 | | |
| MT1A | P04731 | SNORD114-23-201 | ENST00000363536 | 72 nt | BASIC | 0.08 | □□□□□ -2.4 | | |
| MT1A | P04731 | U3.8-201 | ENST00000363675 | 217 nt | BASIC | 0.08 | □□□□□ -2.4 | | |
| MT1A | P04731 | DNAH14-203 | ENST00000366848 | 929 nt | TSL 1 (best) BASIC | 0.08 | □□□□□ -2.4 | | |
| MT1A | P04731 | BX248415.1-201 | ENST00000367421 | 1043 nt | APPRIS P1 TSL 1 (best) BASIC | 0.08 | □□□□□ -2.4 | | |
| MT1A | P04731 | RNU6-342P-201 | ENST00000384521 | 104 nt | BASIC | 0.08 | □□□□□ -2.4 | | |
| MT1A | P04731 | RNU6-1105P-201 | ENST00000384774 | 107 nt | BASIC | 0.08 | □□□□□ -2.4 | | |
| MT1A | P04731 | MIR216A-201 | ENST00000385063 | 110 nt | BASIC | 0.08 | □□□□□ -2.4 | | |
| MT1A | P04731 | MIR320B1-201 | ENST00000390209 | 79 nt | BASIC | 0.08 | □□□□□ -2.4 | | |
| MT1A | P04731 | RNA5SP511-201 | ENST00000410487 | 115 nt | BASIC | 0.08 | □□□□□ -2.4 | | |
| MT1A | P04731 | RNU4-78P-201 | ENST00000410940 | 126 nt | BASIC | 0.08 | □□□□□ -2.4 | | |
| MT1A | P04731 | RPS26P5-201 | ENST00000418544 | 335 nt | BASIC | 0.08 | □□□□□ -2.4 | | |
| MT1A | P04731 | EFCAB14-AS1-201 | ENST00000418985 | 491 nt | TSL 3 BASIC | 0.08 | □□□□□ -2.4 | | |
| MT1A | P04731 | LINC01427-201 | ENST00000420928 | 504 nt | TSL 3 BASIC | 0.08 | □□□□□ -2.4 | | |
| MT1A | P04731 | OFD1P2Y-201 | ENST00000421895 | 1149 nt | BASIC | 0.08 | □□□□□ -2.4 | | |
| MT1A | P04731 | EZH2P1-201 | ENST00000431167 | 291 nt | BASIC | 0.08 | □□□□□ -2.4 | | |
| MT1A | P04731 | MTND4P6-201 | ENST00000438297 | 472 nt | BASIC | 0.08 | □□□□□ -2.4 | | |
| MT1A | P04731 | AP002512.3-201 | ENST00000440231 | 985 nt | APPRIS P1 BASIC | 0.08 | □□□□□ -2.4 | | |
| MT1A | P04731 | AC007879.4-201 | ENST00000440545 | 361 nt | TSL 3 BASIC | 0.08 | □□□□□ -2.4 | | |
| MT1A | P04731 | JTBP1-201 | ENST00000441314 | 247 nt | BASIC | 0.08 | □□□□□ -2.4 | | |
| MT1A | P04731 | Z77249.1-201 | ENST00000444622 | 1175 nt | BASIC | 0.08 | □□□□□ -2.4 | | |
| MT1A | P04731 | ARPC3P5-201 | ENST00000448802 | 534 nt | BASIC | 0.08 | □□□□□ -2.4 | | |
| MT1A | P04731 | MTND5P8-201 | ENST00000449817 | 1083 nt | BASIC | 0.08 | □□□□□ -2.4 | | |
| MT1A | P04731 | RPS20P10-201 | ENST00000451209 | 253 nt | BASIC | 0.08 | □□□□□ -2.4 | | |
| MT1A | P04731 | HMGN2P9-201 | ENST00000476875 | 229 nt | BASIC | 0.08 | □□□□□ -2.4 | | |
| MT1A | P04731 | LNCPRESS2-201 | ENST00000502518 | 616 nt | TSL 5 BASIC | 0.08 | □□□□□ -2.4 | | |
| MT1A | P04731 | AC008539.1-201 | ENST00000507653 | 482 nt | TSL 3 BASIC | 0.08 | □□□□□ -2.4 | | |
| MT1A | P04731 | AC098591.2-201 | ENST00000510152 | 315 nt | BASIC | 0.08 | □□□□□ -2.4 | | |
| MT1A | P04731 | AC096711.1-201 | ENST00000510967 | 347 nt | TSL 5 BASIC | 0.08 | □□□□□ -2.4 | | |
| MT1A | P04731 | RNU4-54P-201 | ENST00000516428 | 129 nt | BASIC | 0.08 | □□□□□ -2.4 | | |
| MT1A | P04731 | RNA5SP121-201 | ENST00000516537 | 101 nt | BASIC | 0.08 | □□□□□ -2.4 | | |
| MT1A | P04731 | RNU6-197P-201 | ENST00000516680 | 100 nt | BASIC | 0.08 | □□□□□ -2.4 | | |
| MT1A | P04731 | AP003355.1-201 | ENST00000518956 | 587 nt | BASIC | 0.08 | □□□□□ -2.4 | | |
| MT1A | P04731 | AC090124.1-201 | ENST00000525097 | 448 nt | TSL 3 BASIC | 0.08 | □□□□□ -2.4 | | |
| MT1A | P04731 | AC087362.2-201 | ENST00000529325 | 256 nt | TSL 3 BASIC | 0.08 | □□□□□ -2.4 | | |
| MT1A | P04731 | AC044798.1-201 | ENST00000565146 | 418 nt | TSL 5 BASIC | 0.08 | □□□□□ -2.4 | | |
| MT1A | P04731 | AC008088.1-201 | ENST00000580993 | 280 nt | BASIC | 0.08 | □□□□□ -2.4 | | |
| MT1A | P04731 | AC090371.2-202 | ENST00000582239 | 644 nt | TSL 5 BASIC | 0.08 | □□□□□ -2.4 | | |
| MT1A | P04731 | AC245748.3-201 | ENST00000588710 | 241 nt | TSL 3 BASIC | 0.08 | □□□□□ -2.4 | | |
| MT1A | P04731 | AC105094.2-203 | ENST00000590357 | 555 nt | TSL 4 BASIC | 0.08 | □□□□□ -2.4 | | |
| MT1A | P04731 | AC073544.2-201 | ENST00000601155 | 540 nt | BASIC | 0.08 | □□□□□ -2.4 | | |
| MT1A | P04731 | AL021997.1-201 | ENST00000605757 | 193 nt | BASIC | 0.08 | □□□□□ -2.4 | | |
| MT1A | P04731 | AC019131.2-201 | ENST00000609071 | 870 nt | BASIC | 0.08 | □□□□□ -2.4 | | |
| MT1A | P04731 | FAM19A1-204 | ENST00000617084 | 159 nt | TSL 5 BASIC | 0.08 | □□□□□ -2.4 | | |
| MT1A | P04731 | OR8H2-202 | ENST00000618136 | 1038 nt | APPRIS ALT1 BASIC | 0.08 | □□□□□ -2.4 | | |
| MT1A | P04731 | HOXA11-AS1_6.1-201 | ENST00000620092 | 179 nt | BASIC | 0.08 | □□□□□ -2.4 | | |
| MT1A | P04731 | CNBD1-207 | ENST00000620844 | 876 nt | APPRIS ALT2 TSL 5 BASIC | 0.08 | □□□□□ -2.4 | | |
| MT1A | P04731 | AP003400.5-201 | ENST00000624827 | 617 nt | BASIC | 0.08 | □□□□□ -2.4 | | |
| MT1A | P04731 | HIF1A-204 | ENST00000539097 | 3956 nt | TSL 1 (best) BASIC | 0.08 | □□□□□ -2.4 | | |
| MT1A | P04731 | AC010329.5-201 | ENST00000623497 | 2174 nt | BASIC | 0.08 | □□□□□ -2.4 | | |
| MT1A | P04731 | AC005832.2-201 | ENST00000538921 | 1430 nt | BASIC | 0.07 | □□□□□ -2.4 | | |
| MT1A | P04731 | MDM2-205 | ENST00000348801 | 798 nt | TSL 1 (best) BASIC | 0.07 | □□□□□ -2.4 | | |
| MT1A | P04731 | AKAP14-203 | ENST00000371425 | 793 nt | APPRIS ALT2 TSL 5 BASIC | 0.07 | □□□□□ -2.4 | | |
| MT1A | P04731 | SNORA29-201 | ENST00000384183 | 140 nt | BASIC | 0.07 | □□□□□ -2.4 | | |
| MT1A | P04731 | RNU6-439P-201 | ENST00000384188 | 106 nt | BASIC | 0.07 | □□□□□ -2.4 | | |
| MT1A | P04731 | RNU6-516P-201 | ENST00000411381 | 104 nt | BASIC | 0.07 | □□□□□ -2.4 | | |
| MT1A | P04731 | AL162726.4-201 | ENST00000422010 | 673 nt | TSL 5 BASIC | 0.07 | □□□□□ -2.4 | | |
| MT1A | P04731 | AL390774.2-201 | ENST00000423942 | 788 nt | TSL 3 BASIC | 0.07 | □□□□□ -2.4 | | |
| MT1A | P04731 | AC092573.2-201 | ENST00000434546 | 243 nt | BASIC | 0.07 | □□□□□ -2.4 | | |
| MT1A | P04731 | AL353743.2-202 | ENST00000439544 | 473 nt | TSL 3 BASIC | 0.07 | □□□□□ -2.4 | | |
| MT1A | P04731 | PGBD4P5-201 | ENST00000445958 | 426 nt | BASIC | 0.07 | □□□□□ -2.4 | | |
| MT1A | P04731 | HTR2A-AS1-202 | ENST00000452352 | 384 nt | TSL 2 BASIC | 0.07 | □□□□□ -2.4 | | |
| MT1A | P04731 | RPL26P9-201 | ENST00000457466 | 433 nt | BASIC | 0.07 | □□□□□ -2.4 | | |
| MT1A | P04731 | snoU13.9-201 | ENST00000458927 | 103 nt | BASIC | 0.07 | □□□□□ -2.4 | | |
| MT1A | P04731 | CPHL1P-203 | ENST00000471823 | 523 nt | TSL 5 BASIC | 0.07 | □□□□□ -2.4 | | |
| MT1A | P04731 | AL163195.1-201 | ENST00000496941 | 348 nt | BASIC | 0.07 | □□□□□ -2.4 | | |
| MT1A | P04731 | LINC02233-201 | ENST00000513718 | 358 nt | TSL 3 BASIC | 0.07 | □□□□□ -2.4 | | |
| MT1A | P04731 | LDHBP3-201 | ENST00000514909 | 822 nt | BASIC | 0.07 | □□□□□ -2.4 | | |
| MT1A | P04731 | RNU5F-8P-201 | ENST00000515941 | 111 nt | BASIC | 0.07 | □□□□□ -2.4 | | |
| MT1A | P04731 | AC087854.1-201 | ENST00000519706 | 414 nt | BASIC | 0.07 | □□□□□ -2.4 | | |
| MT1A | P04731 | AC087277.2-201 | ENST00000533203 | 151 nt | TSL 5 BASIC | 0.07 | □□□□□ -2.4 | | |
| MT1A | P04731 | AC007368.1-201 | ENST00000536422 | 974 nt | TSL 5 BASIC | 0.07 | □□□□□ -2.4 | | |
| MT1A | P04731 | AP000462.2-203 | ENST00000540545 | 715 nt | TSL 5 BASIC | 0.07 | □□□□□ -2.4 | | |
| MT1A | P04731 | AC087897.1-201 | ENST00000550134 | 156 nt | BASIC | 0.07 | □□□□□ -2.4 | | |
| MT1A | P04731 | AL157688.1-201 | ENST00000555990 | 369 nt | TSL 3 BASIC | 0.07 | □□□□□ -2.4 | | |
| MT1A | P04731 | AC233702.2-202 | ENST00000562547 | 291 nt | BASIC | 0.07 | □□□□□ -2.4 | | |
| MT1A | P04731 | AL356432.3-201 | ENST00000568952 | 465 nt | BASIC | 0.07 | □□□□□ -2.4 | | |
| MT1A | P04731 | DLGAP1-AS4-201 | ENST00000582054 | 757 nt | TSL 5 BASIC | 0.07 | □□□□□ -2.4 | | |
| MT1A | P04731 | MIR5093-201 | ENST00000583199 | 100 nt | BASIC | 0.07 | □□□□□ -2.4 | | |
| MT1A | P04731 | RN7SL793P-201 | ENST00000583259 | 296 nt | BASIC | 0.07 | □□□□□ -2.4 | | |
| MT1A | P04731 | AC011712.1-201 | ENST00000588959 | 234 nt | BASIC | 0.07 | □□□□□ -2.4 | | |
| MT1A | P04731 | AC008751.2-201 | ENST00000597885 | 980 nt | BASIC | 0.07 | □□□□□ -2.4 | | |