Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.23□□□□□ -2.37
APOBP04114 Y_RNA.132-201ENST00000363421 102 ntBASIC0.23□□□□□ -2.37
APOBP04114 RNY3-201ENST00000365484 102 ntBASIC0.23□□□□□ -2.37
APOBP04114 RNU6-837P-201ENST00000391056 108 ntBASIC0.23□□□□□ -2.37
APOBP04114 TOMM22P2-201ENST00000430735 237 ntBASIC0.23□□□□□ -2.37
APOBP04114 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.23□□□□□ -2.37
APOBP04114 RPL23AP3-201ENST00000453844 468 ntBASIC0.23□□□□□ -2.37
APOBP04114 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC0.23□□□□□ -2.37
APOBP04114 FAM60CP-201ENST00000591086 664 ntBASIC0.23□□□□□ -2.37
APOBP04114 AL161423.1-201ENST00000613700 262 ntBASIC0.23□□□□□ -2.37
APOBP04114 AC099842.1-201ENST00000619919 596 ntBASIC0.23□□□□□ -2.37
APOBP04114 AC145207.9-201ENST00000623802 325 ntBASIC0.23□□□□□ -2.37
APOBP04114 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
APOBP04114 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC0.22□□□□□ -2.37
APOBP04114 MTCO3P4-201ENST00000419236 787 ntBASIC0.22□□□□□ -2.37
APOBP04114 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC0.22□□□□□ -2.37
APOBP04114 AC087477.1-201ENST00000465747 340 ntBASIC0.22□□□□□ -2.37
APOBP04114 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC0.22□□□□□ -2.37
APOBP04114 SNORA31.13-201ENST00000516624 135 ntBASIC0.22□□□□□ -2.37
APOBP04114 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.22□□□□□ -2.37
APOBP04114 AL078605.1-201ENST00000603529 500 ntBASIC0.22□□□□□ -2.37
APOBP04114 AC108676.2-201ENST00000605225 163 ntBASIC0.22□□□□□ -2.37
APOBP04114 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
APOBP04114 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC0.22□□□□□ -2.37
APOBP04114 AC010329.5-201ENST00000623497 2174 ntBASIC0.22□□□□□ -2.37
APOBP04114 RNU1-58P-201ENST00000362413 163 ntBASIC0.22□□□□□ -2.37
APOBP04114 RNU6-45P-201ENST00000384471 107 ntBASIC0.22□□□□□ -2.37
APOBP04114 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC0.22□□□□□ -2.37
APOBP04114 VN1R36P-201ENST00000414936 291 ntBASIC0.22□□□□□ -2.37
APOBP04114 Z99497.1-201ENST00000421282 135 ntBASIC0.22□□□□□ -2.37
APOBP04114 SNRPEP7-201ENST00000438350 220 ntBASIC0.22□□□□□ -2.37
APOBP04114 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.22□□□□□ -2.37
APOBP04114 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.22□□□□□ -2.37
APOBP04114 RPL31P3-201ENST00000458430 332 ntBASIC0.22□□□□□ -2.37
APOBP04114 AC068620.3-201ENST00000602749 560 ntBASIC0.22□□□□□ -2.37
APOBP04114 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.22□□□□□ -2.37
APOBP04114 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC0.22□□□□□ -2.37
APOBP04114 RNU4-73P-201ENST00000363164 141 ntBASIC0.22□□□□□ -2.37
APOBP04114 RNA5SP252-201ENST00000391131 119 ntBASIC0.22□□□□□ -2.37
APOBP04114 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.22□□□□□ -2.37
APOBP04114 AC013410.2-201ENST00000422627 201 ntBASIC0.22□□□□□ -2.37
APOBP04114 AC004383.1-201ENST00000438135 289 ntBASIC0.22□□□□□ -2.37
APOBP04114 DDX3P2-201ENST00000446138 111 ntBASIC0.22□□□□□ -2.37
APOBP04114 OR6C72P-201ENST00000451403 892 ntBASIC0.22□□□□□ -2.37
APOBP04114 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC0.22□□□□□ -2.37
APOBP04114 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC0.22□□□□□ -2.37
APOBP04114 AL138880.2-201ENST00000616214 239 ntBASIC0.22□□□□□ -2.37
APOBP04114 MTND4P16-201ENST00000466108 1367 ntBASIC0.22□□□□□ -2.37
APOBP04114 Y_RNA.572-201ENST00000384757 98 ntBASIC0.21□□□□□ -2.38
APOBP04114 AL022718.1-201ENST00000412004 84 ntBASIC0.21□□□□□ -2.38
APOBP04114 RPL37P21-201ENST00000435890 276 ntBASIC0.21□□□□□ -2.38
APOBP04114 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
APOBP04114 MIR4713-201ENST00000582691 75 ntBASIC0.21□□□□□ -2.38
APOBP04114 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.21□□□□□ -2.38
APOBP04114 RNU6-733P-201ENST00000410759 104 ntBASIC0.21□□□□□ -2.38
APOBP04114 PIGPP2-201ENST00000411569 458 ntBASIC0.21□□□□□ -2.38
APOBP04114 BOLA3P3-201ENST00000505182 232 ntBASIC0.21□□□□□ -2.38
APOBP04114 SNORA48.10-201ENST00000516965 160 ntBASIC0.21□□□□□ -2.38
APOBP04114 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.21□□□□□ -2.38
APOBP04114 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC0.21□□□□□ -2.38
APOBP04114 HSPE1P19-201ENST00000603327 295 ntBASIC0.21□□□□□ -2.38
APOBP04114 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.21□□□□□ -2.38
APOBP04114 AL356585.4-201ENST00000623078 1229 ntBASIC0.21□□□□□ -2.38
APOBP04114 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC0.21□□□□□ -2.38
APOBP04114 RNU6-349P-201ENST00000362402 107 ntBASIC0.21□□□□□ -2.38
APOBP04114 RNU6-1305P-201ENST00000364353 104 ntBASIC0.21□□□□□ -2.38
APOBP04114 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.21□□□□□ -2.38
APOBP04114 AC079140.2-201ENST00000506193 142 ntBASIC0.21□□□□□ -2.38
APOBP04114 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC0.21□□□□□ -2.38
APOBP04114 AC019288.1-201ENST00000557918 224 ntBASIC0.21□□□□□ -2.38
APOBP04114 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC0.21□□□□□ -2.38
APOBP04114 AP003400.5-201ENST00000624827 617 ntBASIC0.21□□□□□ -2.38
APOBP04114 AC110491.1-201ENST00000562191 2010 ntBASIC0.21□□□□□ -2.38
APOBP04114 Y_RNA.35-201ENST00000362601 101 ntBASIC0.21□□□□□ -2.38
APOBP04114 RNU6-968P-201ENST00000384076 107 ntBASIC0.21□□□□□ -2.38
APOBP04114 RPL37P10-201ENST00000412884 288 ntBASIC0.21□□□□□ -2.38
APOBP04114 RPL7L1P10-201ENST00000427790 463 ntBASIC0.21□□□□□ -2.38
APOBP04114 AL121578.1-201ENST00000428051 892 ntBASIC0.21□□□□□ -2.38
APOBP04114 AC013244.3-201ENST00000605614 388 ntBASIC0.21□□□□□ -2.38
APOBP04114 MIR10B-201ENST00000385011 110 ntBASIC0.2□□□□□ -2.38
APOBP04114 AC023141.4-201ENST00000412031 328 ntBASIC0.2□□□□□ -2.38
APOBP04114 SSR3-208ENST00000496050 579 ntTSL 4 BASIC0.2□□□□□ -2.38
APOBP04114 SCARNA11.3-201ENST00000517276 130 ntBASIC0.2□□□□□ -2.38
APOBP04114 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.2□□□□□ -2.38
APOBP04114 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC0.2□□□□□ -2.38
APOBP04114 AL357075.2-201ENST00000614906 189 ntBASIC0.2□□□□□ -2.38
APOBP04114 HSBP1P2-201ENST00000299671 229 ntBASIC0.2□□□□□ -2.38
APOBP04114 MIR518A2-201ENST00000384966 87 ntBASIC0.2□□□□□ -2.38
APOBP04114 AL356421.1-201ENST00000403255 413 ntBASIC0.2□□□□□ -2.38
APOBP04114 AL356776.1-201ENST00000406574 447 ntBASIC0.2□□□□□ -2.38
APOBP04114 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC0.2□□□□□ -2.38
APOBP04114 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC0.2□□□□□ -2.38
APOBP04114 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC0.2□□□□□ -2.38
APOBP04114 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC0.2□□□□□ -2.38
APOBP04114 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC0.2□□□□□ -2.38
APOBP04114 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC0.2□□□□□ -2.38
APOBP04114 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.2□□□□□ -2.38
APOBP04114 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC0.2□□□□□ -2.38
APOBP04114 AC018755.4-201ENST00000619715 454 ntBASIC0.2□□□□□ -2.38
APOBP04114 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms