Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 RNU5B-3P-201ENST00000516601 115 ntBASIC1.67□□□□□ -2.14
APOA1P02647 RNU6-572P-201ENST00000516724 80 ntBASIC1.67□□□□□ -2.14
APOA1P02647 RNU6-64P-201ENST00000517119 105 ntBASIC1.67□□□□□ -2.14
APOA1P02647 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.67□□□□□ -2.14
APOA1P02647 CYCSP27-201ENST00000527643 293 ntBASIC1.67□□□□□ -2.14
APOA1P02647 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.67□□□□□ -2.14
APOA1P02647 MIR1254-2-201ENST00000579553 63 ntBASIC1.67□□□□□ -2.14
APOA1P02647 MIR4429-201ENST00000580105 73 ntBASIC1.67□□□□□ -2.14
APOA1P02647 MIR4285-201ENST00000581001 85 ntBASIC1.67□□□□□ -2.14
APOA1P02647 VN1R83P-201ENST00000595685 445 ntBASIC1.67□□□□□ -2.14
APOA1P02647 RPL30P11-203ENST00000598995 310 ntBASIC1.67□□□□□ -2.14
APOA1P02647 AC090970.3-201ENST00000612566 866 ntBASIC1.67□□□□□ -2.14
APOA1P02647 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.67□□□□□ -2.14
APOA1P02647 AC108479.2-201ENST00000617314 601 ntBASIC1.67□□□□□ -2.14
APOA1P02647 AL731566.2-201ENST00000618971 317 ntBASIC1.67□□□□□ -2.14
APOA1P02647 AC010378.1-201ENST00000619270 362 ntBASIC1.67□□□□□ -2.14
APOA1P02647 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.67□□□□□ -2.14
APOA1P02647 AC092192.1-201ENST00000633154 1018 ntBASIC1.67□□□□□ -2.14
APOA1P02647 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
APOA1P02647 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
APOA1P02647 SNORA63.3-201ENST00000362682 132 ntBASIC1.66□□□□□ -2.14
APOA1P02647 RNU6-7-201ENST00000364784 107 ntBASIC1.66□□□□□ -2.14
APOA1P02647 RNU6-8-201ENST00000365467 107 ntBASIC1.66□□□□□ -2.14
APOA1P02647 MTCO1P17-201ENST00000411522 491 ntBASIC1.66□□□□□ -2.14
APOA1P02647 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.66□□□□□ -2.14
APOA1P02647 AL672167.3-201ENST00000465951 960 ntBASIC1.66□□□□□ -2.14
APOA1P02647 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.66□□□□□ -2.14
APOA1P02647 RNU6-143P-201ENST00000516942 93 ntBASIC1.66□□□□□ -2.14
APOA1P02647 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC1.66□□□□□ -2.14
APOA1P02647 LRRC6P1-201ENST00000532188 885 ntBASIC1.66□□□□□ -2.14
APOA1P02647 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.66□□□□□ -2.14
APOA1P02647 AL136520.1-202ENST00000555494 763 ntBASIC1.66□□□□□ -2.14
APOA1P02647 AC022254.1-201ENST00000567857 235 ntBASIC1.66□□□□□ -2.14
APOA1P02647 AL356432.3-201ENST00000568952 465 ntBASIC1.66□□□□□ -2.14
APOA1P02647 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC1.66□□□□□ -2.14
APOA1P02647 MTND3P13-201ENST00000574391 343 ntBASIC1.66□□□□□ -2.14
APOA1P02647 MIR3618-201ENST00000580330 88 ntBASIC1.66□□□□□ -2.14
APOA1P02647 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.66□□□□□ -2.14
APOA1P02647 AC021646.1-201ENST00000605469 484 ntBASIC1.66□□□□□ -2.14
APOA1P02647 AL356266.1-201ENST00000623311 483 ntBASIC1.66□□□□□ -2.14
APOA1P02647 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC1.66□□□□□ -2.14
APOA1P02647 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.66□□□□□ -2.14
APOA1P02647 MTND5P6-201ENST00000422338 1798 ntBASIC1.66□□□□□ -2.14
APOA1P02647 AC006020.1-201ENST00000420179 1854 ntBASIC1.65□□□□□ -2.14
APOA1P02647 TEX21P-201ENST00000447107 1476 ntBASIC1.65□□□□□ -2.15
APOA1P02647 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.15
APOA1P02647 MIR1283-2-201ENST00000408621 87 ntBASIC1.65□□□□□ -2.15
APOA1P02647 RNU6ATAC34P-201ENST00000408879 121 ntBASIC1.65□□□□□ -2.15
APOA1P02647 AL359704.1-201ENST00000411586 781 ntBASIC1.65□□□□□ -2.15
APOA1P02647 VN1R51P-201ENST00000411675 945 ntBASIC1.65□□□□□ -2.15
APOA1P02647 POLHP1-201ENST00000411806 470 ntBASIC1.65□□□□□ -2.15
APOA1P02647 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC1.65□□□□□ -2.15
APOA1P02647 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.65□□□□□ -2.15
APOA1P02647 MTND1P16-201ENST00000465177 898 ntBASIC1.65□□□□□ -2.15
APOA1P02647 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.65□□□□□ -2.15
APOA1P02647 RPL7P43-201ENST00000478876 753 ntBASIC1.65□□□□□ -2.15
APOA1P02647 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC1.65□□□□□ -2.15
APOA1P02647 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.65□□□□□ -2.15
APOA1P02647 RNU6-586P-201ENST00000517265 104 ntBASIC1.65□□□□□ -2.15
APOA1P02647 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.65□□□□□ -2.15
APOA1P02647 AC026464.5-201ENST00000562497 722 ntBASIC1.65□□□□□ -2.15
APOA1P02647 DEFB122-202ENST00000569013 197 ntBASIC1.65□□□□□ -2.15
APOA1P02647 MIR4293-201ENST00000584305 78 ntBASIC1.65□□□□□ -2.15
APOA1P02647 AL160281.1-201ENST00000605307 311 ntBASIC1.65□□□□□ -2.15
APOA1P02647 AC103810.8-201ENST00000607347 118 ntBASIC1.65□□□□□ -2.15
APOA1P02647 AC126118.1-201ENST00000607744 628 ntBASIC1.65□□□□□ -2.15
APOA1P02647 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.65□□□□□ -2.15
APOA1P02647 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.65□□□□□ -2.15
APOA1P02647 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.65□□□□□ -2.15
APOA1P02647 AL136313.1-201ENST00000624804 202 ntBASIC1.65□□□□□ -2.15
APOA1P02647 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
APOA1P02647 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC1.64□□□□□ -2.15
APOA1P02647 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
APOA1P02647 MTND5P33-201ENST00000571250 1450 ntBASIC1.64□□□□□ -2.15
APOA1P02647 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
APOA1P02647 MIR126-201ENST00000362291 85 ntBASIC1.64□□□□□ -2.15
APOA1P02647 RNU6-288P-201ENST00000363690 104 ntBASIC1.64□□□□□ -2.15
APOA1P02647 MIR29C-201ENST00000385231 88 ntBASIC1.64□□□□□ -2.15
APOA1P02647 RNA5SP465-201ENST00000391195 109 ntBASIC1.64□□□□□ -2.15
APOA1P02647 AL356967.1-201ENST00000406305 431 ntBASIC1.64□□□□□ -2.15
APOA1P02647 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.64□□□□□ -2.15
APOA1P02647 HMGN2P3-201ENST00000433603 273 ntBASIC1.64□□□□□ -2.15
APOA1P02647 HMGN2P5-201ENST00000436882 273 ntBASIC1.64□□□□□ -2.15
APOA1P02647 HIGD1AP2-201ENST00000446367 280 ntBASIC1.64□□□□□ -2.15
APOA1P02647 ZNF886P-201ENST00000450781 723 ntBASIC1.64□□□□□ -2.15
APOA1P02647 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
APOA1P02647 RPL21P99-201ENST00000480369 423 ntBASIC1.64□□□□□ -2.15
APOA1P02647 RPS3AP14-201ENST00000483907 780 ntBASIC1.64□□□□□ -2.15
APOA1P02647 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.64□□□□□ -2.15
APOA1P02647 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.64□□□□□ -2.15
APOA1P02647 AC008834.1-201ENST00000511612 175 ntBASIC1.64□□□□□ -2.15
APOA1P02647 AC093752.1-206ENST00000511823 336 ntBASIC1.64□□□□□ -2.15
APOA1P02647 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.64□□□□□ -2.15
APOA1P02647 MTCYBP43-201ENST00000513621 740 ntBASIC1.64□□□□□ -2.15
APOA1P02647 AC009902.1-201ENST00000519351 183 ntBASIC1.64□□□□□ -2.15
APOA1P02647 AP001646.1-201ENST00000527936 915 ntBASIC1.64□□□□□ -2.15
APOA1P02647 AL021368.1-201ENST00000607490 540 ntBASIC1.64□□□□□ -2.15
APOA1P02647 AC096772.1-201ENST00000609146 564 ntBASIC1.64□□□□□ -2.15
APOA1P02647 MIR7106-201ENST00000612419 65 ntBASIC1.64□□□□□ -2.15
APOA1P02647 Y_RNA.783-201ENST00000613546 102 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms