Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
DDX58O95786 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
DDX58O95786 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
DDX58O95786 MTND4P35-201ENST00000604257 1375 ntBASIC3.3□□□□□ -1.88
DDX58O95786 Y_RNA.359-201ENST00000365498 102 ntBASIC3.3□□□□□ -1.88
DDX58O95786 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.3□□□□□ -1.88
DDX58O95786 RNU1-73P-201ENST00000383971 164 ntBASIC3.3□□□□□ -1.88
DDX58O95786 RNU6-658P-201ENST00000384606 106 ntBASIC3.3□□□□□ -1.88
DDX58O95786 RPL26P27-201ENST00000414397 437 ntBASIC3.3□□□□□ -1.88
DDX58O95786 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.3□□□□□ -1.88
DDX58O95786 AL358075.3-201ENST00000426289 226 ntBASIC3.3□□□□□ -1.88
DDX58O95786 AC011816.1-201ENST00000441346 546 ntBASIC3.3□□□□□ -1.88
DDX58O95786 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.3□□□□□ -1.88
DDX58O95786 KLF3P2-201ENST00000465138 268 ntBASIC3.3□□□□□ -1.88
DDX58O95786 RPS26P21-201ENST00000475397 348 ntBASIC3.3□□□□□ -1.88
DDX58O95786 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.3□□□□□ -1.88
DDX58O95786 AC009901.1-201ENST00000506703 541 ntBASIC3.3□□□□□ -1.88
DDX58O95786 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.3□□□□□ -1.88
DDX58O95786 AC022447.1-201ENST00000515358 464 ntBASIC3.3□□□□□ -1.88
DDX58O95786 RNA5SP148-201ENST00000516527 94 ntBASIC3.3□□□□□ -1.88
DDX58O95786 RN7SKP282-201ENST00000516824 299 ntBASIC3.3□□□□□ -1.88
DDX58O95786 RNU6-1220P-201ENST00000517126 108 ntBASIC3.3□□□□□ -1.88
DDX58O95786 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
DDX58O95786 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.3□□□□□ -1.88
DDX58O95786 AC234778.2-201ENST00000566241 354 ntBASIC3.3□□□□□ -1.88
DDX58O95786 MIR4528-201ENST00000577763 90 ntBASIC3.3□□□□□ -1.88
DDX58O95786 AC245014.2-201ENST00000603689 287 ntBASIC3.3□□□□□ -1.88
DDX58O95786 AC246785.4-201ENST00000605374 287 ntBASIC3.3□□□□□ -1.88
DDX58O95786 AL158032.1-201ENST00000605401 106 ntBASIC3.3□□□□□ -1.88
DDX58O95786 AC022893.3-201ENST00000607665 437 ntBASIC3.3□□□□□ -1.88
DDX58O95786 AC013562.2-201ENST00000611632 603 ntBASIC3.3□□□□□ -1.88
DDX58O95786 AC130324.3-201ENST00000614165 542 ntBASIC3.3□□□□□ -1.88
DDX58O95786 AC072046.2-201ENST00000618366 268 ntBASIC3.3□□□□□ -1.88
DDX58O95786 AC002064.3-201ENST00000623448 346 ntBASIC3.3□□□□□ -1.88
DDX58O95786 Z99571.1-201ENST00000636677 394 ntBASIC3.3□□□□□ -1.88
DDX58O95786 U6.99-201ENST00000637524 83 ntBASIC3.3□□□□□ -1.88
DDX58O95786 LRRC77P-213ENST00000637727 880 ntBASIC3.3□□□□□ -1.88
DDX58O95786 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
DDX58O95786 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
DDX58O95786 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
DDX58O95786 AC092435.3-201ENST00000565538 3654 ntBASIC3.29□□□□□ -1.88
DDX58O95786 U3.12-201ENST00000364498 214 ntBASIC3.29□□□□□ -1.88
DDX58O95786 RNU6-348P-201ENST00000384386 107 ntBASIC3.29□□□□□ -1.88
DDX58O95786 SNORD88.1-201ENST00000408684 91 ntBASIC3.29□□□□□ -1.88
DDX58O95786 AL353729.1-201ENST00000425044 720 ntBASIC3.29□□□□□ -1.88
DDX58O95786 HMGB1P9-201ENST00000429856 646 ntBASIC3.29□□□□□ -1.88
DDX58O95786 GTF2IP20-201ENST00000431663 360 ntBASIC3.29□□□□□ -1.88
DDX58O95786 RPL23AP30-201ENST00000432419 501 ntBASIC3.29□□□□□ -1.88
DDX58O95786 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.29□□□□□ -1.88
DDX58O95786 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.29□□□□□ -1.88
DDX58O95786 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.29□□□□□ -1.88
DDX58O95786 RPL23AP11-201ENST00000475260 469 ntBASIC3.29□□□□□ -1.88
DDX58O95786 AC007182.2-201ENST00000489251 402 ntBASIC3.29□□□□□ -1.88
DDX58O95786 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.29□□□□□ -1.88
DDX58O95786 Y_RNA.689-201ENST00000516589 107 ntBASIC3.29□□□□□ -1.88
DDX58O95786 AC243972.3-201ENST00000539655 198 ntBASIC3.29□□□□□ -1.88
DDX58O95786 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.29□□□□□ -1.88
DDX58O95786 AL359212.1-201ENST00000556608 614 ntBASIC3.29□□□□□ -1.88
DDX58O95786 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
DDX58O95786 AC020895.1-201ENST00000595362 272 ntBASIC3.29□□□□□ -1.88
DDX58O95786 AC012119.1-201ENST00000603184 222 ntBASIC3.29□□□□□ -1.88
DDX58O95786 AC080013.6-201ENST00000606185 215 ntBASIC3.29□□□□□ -1.88
DDX58O95786 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
DDX58O95786 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.29□□□□□ -1.88
DDX58O95786 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
DDX58O95786 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
DDX58O95786 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
DDX58O95786 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.28□□□□□ -1.88
DDX58O95786 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.28□□□□□ -1.88
DDX58O95786 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
DDX58O95786 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
DDX58O95786 RNU6-169P-201ENST00000365336 107 ntBASIC3.28□□□□□ -1.88
DDX58O95786 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.28□□□□□ -1.88
DDX58O95786 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
DDX58O95786 SNORA75-201ENST00000384158 137 ntBASIC3.28□□□□□ -1.88
DDX58O95786 RNU2-39P-201ENST00000410604 198 ntBASIC3.28□□□□□ -1.88
DDX58O95786 RNU2-49P-201ENST00000410666 184 ntBASIC3.28□□□□□ -1.88
DDX58O95786 BTF3L4P1-201ENST00000413813 468 ntBASIC3.28□□□□□ -1.88
DDX58O95786 NDUFB4P5-201ENST00000415445 361 ntBASIC3.28□□□□□ -1.88
DDX58O95786 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.28□□□□□ -1.88
DDX58O95786 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.28□□□□□ -1.88
DDX58O95786 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.28□□□□□ -1.88
DDX58O95786 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.28□□□□□ -1.88
DDX58O95786 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.28□□□□□ -1.88
DDX58O95786 AL590639.1-201ENST00000456484 337 ntBASIC3.28□□□□□ -1.88
DDX58O95786 AC103975.1-201ENST00000482506 483 ntBASIC3.28□□□□□ -1.88
DDX58O95786 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.28□□□□□ -1.88
DDX58O95786 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.28□□□□□ -1.88
DDX58O95786 AC117522.1-201ENST00000509821 380 ntBASIC3.28□□□□□ -1.88
DDX58O95786 AC079140.3-201ENST00000511111 550 ntBASIC3.28□□□□□ -1.88
DDX58O95786 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.28□□□□□ -1.88
DDX58O95786 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.28□□□□□ -1.88
DDX58O95786 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.28□□□□□ -1.88
DDX58O95786 IGHVIII-44-202ENST00000636235 289 ntBASIC3.28□□□□□ -1.88
DDX58O95786 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
DDX58O95786 CR848007.1-201ENST00000442354 1699 ntBASIC3.27□□□□□ -1.89
DDX58O95786 ADAM3A-203ENST00000461344 2157 ntBASIC3.27□□□□□ -1.89
DDX58O95786 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
DDX58O95786 RNU4-82P-201ENST00000362443 140 ntBASIC3.27□□□□□ -1.89
DDX58O95786 RNA5SP126-201ENST00000365092 109 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms