Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 EIF4EP3-201ENST00000498782 656 ntBASIC2.12□□□□□ -2.07
CTDNEP1O95476 AC098862.1-201ENST00000504991 413 ntBASIC2.12□□□□□ -2.07
CTDNEP1O95476 AC010486.2-201ENST00000505572 483 ntBASIC2.12□□□□□ -2.07
CTDNEP1O95476 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.12□□□□□ -2.07
CTDNEP1O95476 MRPS36P2-201ENST00000512569 299 ntBASIC2.12□□□□□ -2.07
CTDNEP1O95476 RNU6-232P-201ENST00000517144 64 ntBASIC2.12□□□□□ -2.07
CTDNEP1O95476 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.12□□□□□ -2.07
CTDNEP1O95476 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.12□□□□□ -2.07
CTDNEP1O95476 OR11H5P-201ENST00000554039 926 ntBASIC2.12□□□□□ -2.07
CTDNEP1O95476 AC091489.2-201ENST00000566263 604 ntBASIC2.12□□□□□ -2.07
CTDNEP1O95476 AC109446.2-201ENST00000567872 497 ntBASIC2.12□□□□□ -2.07
CTDNEP1O95476 AC012435.1-202ENST00000568772 240 ntBASIC2.12□□□□□ -2.07
CTDNEP1O95476 AC009127.3-201ENST00000570531 403 ntBASIC2.12□□□□□ -2.07
CTDNEP1O95476 MTCYBP22-201ENST00000603788 447 ntBASIC2.12□□□□□ -2.07
CTDNEP1O95476 AL357094.1-201ENST00000603845 844 ntBASIC2.12□□□□□ -2.07
CTDNEP1O95476 AC108747.1-201ENST00000609508 535 ntBASIC2.12□□□□□ -2.07
CTDNEP1O95476 TUG1_2.1-201ENST00000614234 87 ntBASIC2.12□□□□□ -2.07
CTDNEP1O95476 AC009268.2-201ENST00000621925 457 ntBASIC2.12□□□□□ -2.07
CTDNEP1O95476 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.12□□□□□ -2.07
CTDNEP1O95476 HSPA8P4-201ENST00000511877 1920 ntBASIC2.12□□□□□ -2.07
CTDNEP1O95476 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
CTDNEP1O95476 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CTDNEP1O95476 AL445523.1-201ENST00000451184 1362 ntBASIC2.11□□□□□ -2.07
CTDNEP1O95476 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.11□□□□□ -2.07
CTDNEP1O95476 AC022336.2-201ENST00000568966 2538 ntBASIC2.11□□□□□ -2.07
CTDNEP1O95476 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
CTDNEP1O95476 Y_RNA.46-201ENST00000362695 102 ntBASIC2.11□□□□□ -2.07
CTDNEP1O95476 RNU5A-1-201ENST00000362698 116 ntBASIC2.11□□□□□ -2.07
CTDNEP1O95476 SNORD114-1-201ENST00000362705 72 ntBASIC2.11□□□□□ -2.07
CTDNEP1O95476 RNU5F-6P-201ENST00000362979 116 ntBASIC2.11□□□□□ -2.07
CTDNEP1O95476 RN7SKP226-201ENST00000364912 300 ntBASIC2.11□□□□□ -2.07
CTDNEP1O95476 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC2.11□□□□□ -2.07
CTDNEP1O95476 RNU4-52P-201ENST00000384209 138 ntBASIC2.11□□□□□ -2.07
CTDNEP1O95476 Y_RNA.560-201ENST00000384689 102 ntBASIC2.11□□□□□ -2.07
CTDNEP1O95476 RPS20P2-201ENST00000402520 389 ntBASIC2.11□□□□□ -2.07
CTDNEP1O95476 MTCYBP36-201ENST00000404146 440 ntBASIC2.11□□□□□ -2.07
CTDNEP1O95476 MIR1294-201ENST00000408503 142 ntBASIC2.11□□□□□ -2.07
CTDNEP1O95476 MTND1P21-201ENST00000412991 285 ntBASIC2.11□□□□□ -2.07
CTDNEP1O95476 Z85995.1-201ENST00000415547 335 ntBASIC2.11□□□□□ -2.07
CTDNEP1O95476 MORF4L1P6-201ENST00000418771 268 ntBASIC2.11□□□□□ -2.07
CTDNEP1O95476 AL365184.2-201ENST00000431139 435 ntBASIC2.11□□□□□ -2.07
CTDNEP1O95476 MTCYBP39-201ENST00000437562 491 ntBASIC2.11□□□□□ -2.07
CTDNEP1O95476 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.11□□□□□ -2.07
CTDNEP1O95476 AL512286.1-201ENST00000439244 400 ntBASIC2.11□□□□□ -2.07
CTDNEP1O95476 AL049734.2-201ENST00000441066 616 ntBASIC2.11□□□□□ -2.07
CTDNEP1O95476 MTATP6P30-201ENST00000443540 664 ntBASIC2.11□□□□□ -2.07
CTDNEP1O95476 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.11□□□□□ -2.07
CTDNEP1O95476 MTND1P9-201ENST00000453775 944 ntBASIC2.11□□□□□ -2.07
CTDNEP1O95476 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.11□□□□□ -2.07
CTDNEP1O95476 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.11□□□□□ -2.07
CTDNEP1O95476 BZW1P2-201ENST00000473537 826 ntBASIC2.11□□□□□ -2.07
CTDNEP1O95476 RPS15AP36-201ENST00000492022 382 ntBASIC2.11□□□□□ -2.07
CTDNEP1O95476 RN7SL274P-201ENST00000492268 272 ntBASIC2.11□□□□□ -2.07
CTDNEP1O95476 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.11□□□□□ -2.07
CTDNEP1O95476 AC092436.1-201ENST00000506450 503 ntBASIC2.11□□□□□ -2.07
CTDNEP1O95476 NDUFB4P2-201ENST00000509515 391 ntBASIC2.11□□□□□ -2.07
CTDNEP1O95476 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.11□□□□□ -2.07
CTDNEP1O95476 RNA5SP364-201ENST00000516938 78 ntBASIC2.11□□□□□ -2.07
CTDNEP1O95476 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.11□□□□□ -2.07
CTDNEP1O95476 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.11□□□□□ -2.07
CTDNEP1O95476 AL133153.1-201ENST00000557756 303 ntBASIC2.11□□□□□ -2.07
CTDNEP1O95476 ROCK1P1-201ENST00000573767 549 ntBASIC2.11□□□□□ -2.07
CTDNEP1O95476 MIR3616-201ENST00000584070 92 ntBASIC2.11□□□□□ -2.07
CTDNEP1O95476 AC068790.3-201ENST00000602988 553 ntBASIC2.11□□□□□ -2.07
CTDNEP1O95476 AC087241.4-201ENST00000612441 480 ntBASIC2.11□□□□□ -2.07
CTDNEP1O95476 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
CTDNEP1O95476 AC079416.3-201ENST00000624479 549 ntBASIC2.11□□□□□ -2.07
CTDNEP1O95476 AC091965.5-201ENST00000624785 342 ntBASIC2.11□□□□□ -2.07
CTDNEP1O95476 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.11□□□□□ -2.07
CTDNEP1O95476 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CTDNEP1O95476 AL049641.1-201ENST00000441055 1948 ntBASIC2.11□□□□□ -2.07
CTDNEP1O95476 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CTDNEP1O95476 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.1□□□□□ -2.07
CTDNEP1O95476 AC005832.2-201ENST00000538921 1430 ntBASIC2.1□□□□□ -2.07
CTDNEP1O95476 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CTDNEP1O95476 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CTDNEP1O95476 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CTDNEP1O95476 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
CTDNEP1O95476 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CTDNEP1O95476 SNORA38-201ENST00000363946 132 ntBASIC2.1□□□□□ -2.07
CTDNEP1O95476 SNORA6-201ENST00000384033 151 ntBASIC2.1□□□□□ -2.07
CTDNEP1O95476 RNU6-920P-201ENST00000410926 92 ntBASIC2.1□□□□□ -2.07
CTDNEP1O95476 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.1□□□□□ -2.07
CTDNEP1O95476 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.1□□□□□ -2.07
CTDNEP1O95476 UBE2FP1-201ENST00000416536 447 ntBASIC2.1□□□□□ -2.07
CTDNEP1O95476 AC099548.1-201ENST00000421443 426 ntBASIC2.1□□□□□ -2.07
CTDNEP1O95476 RPS27AP14-201ENST00000422868 454 ntBASIC2.1□□□□□ -2.07
CTDNEP1O95476 AL365203.2-201ENST00000423444 196 ntBASIC2.1□□□□□ -2.07
CTDNEP1O95476 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.1□□□□□ -2.07
CTDNEP1O95476 PGBD4P3-201ENST00000440731 581 ntBASIC2.1□□□□□ -2.07
CTDNEP1O95476 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC2.1□□□□□ -2.07
CTDNEP1O95476 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.1□□□□□ -2.07
CTDNEP1O95476 AP1S2P1-201ENST00000457344 379 ntBASIC2.1□□□□□ -2.07
CTDNEP1O95476 RPL30P6-201ENST00000475925 342 ntBASIC2.1□□□□□ -2.07
CTDNEP1O95476 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.1□□□□□ -2.07
CTDNEP1O95476 AC107393.1-201ENST00000512403 346 ntBASIC2.1□□□□□ -2.07
CTDNEP1O95476 RNU6-1003P-201ENST00000517099 105 ntBASIC2.1□□□□□ -2.07
CTDNEP1O95476 NRON-201ENST00000517270 370 ntBASIC2.1□□□□□ -2.07
CTDNEP1O95476 ATP5F1P5-201ENST00000526403 760 ntBASIC2.1□□□□□ -2.07
CTDNEP1O95476 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 152.1 ms