Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.67□□□□□ -1.82
VPS4BO75351 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.67□□□□□ -1.82
VPS4BO75351 AL133383.2-201ENST00000622958 2336 ntBASIC3.67□□□□□ -1.82
VPS4BO75351 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
VPS4BO75351 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
VPS4BO75351 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.67□□□□□ -1.82
VPS4BO75351 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
VPS4BO75351 AL021368.2-201ENST00000606125 5352 ntBASIC3.66□□□□□ -1.82
VPS4BO75351 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.66□□□□□ -1.82
VPS4BO75351 Y_RNA.67-201ENST00000362870 100 ntBASIC3.66□□□□□ -1.82
VPS4BO75351 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.66□□□□□ -1.82
VPS4BO75351 Y_RNA.431-201ENST00000384086 102 ntBASIC3.66□□□□□ -1.82
VPS4BO75351 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
VPS4BO75351 AL360182.1-201ENST00000397433 468 ntBASIC3.66□□□□□ -1.82
VPS4BO75351 RPL21P17-201ENST00000397467 475 ntBASIC3.66□□□□□ -1.82
VPS4BO75351 RNU2-37P-201ENST00000410695 177 ntBASIC3.66□□□□□ -1.82
VPS4BO75351 AL139247.1-201ENST00000422768 325 ntBASIC3.66□□□□□ -1.82
VPS4BO75351 VDAC1P3-201ENST00000434069 851 ntBASIC3.66□□□□□ -1.82
VPS4BO75351 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.66□□□□□ -1.82
VPS4BO75351 FABP5P15-201ENST00000453566 214 ntBASIC3.66□□□□□ -1.82
VPS4BO75351 Y_RNA.632-201ENST00000459189 102 ntBASIC3.66□□□□□ -1.82
VPS4BO75351 RPL23AP62-201ENST00000463396 453 ntBASIC3.66□□□□□ -1.82
VPS4BO75351 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.66□□□□□ -1.82
VPS4BO75351 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.66□□□□□ -1.82
VPS4BO75351 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.66□□□□□ -1.82
VPS4BO75351 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.66□□□□□ -1.82
VPS4BO75351 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
VPS4BO75351 RNU6-1256P-201ENST00000516539 103 ntBASIC3.66□□□□□ -1.82
VPS4BO75351 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.66□□□□□ -1.82
VPS4BO75351 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.66□□□□□ -1.82
VPS4BO75351 MIR3690-201ENST00000580266 75 ntBASIC3.66□□□□□ -1.82
VPS4BO75351 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.66□□□□□ -1.82
VPS4BO75351 AC073539.2-201ENST00000597113 165 ntBASIC3.66□□□□□ -1.82
VPS4BO75351 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.66□□□□□ -1.82
VPS4BO75351 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.66□□□□□ -1.82
VPS4BO75351 AC012119.1-201ENST00000603184 222 ntBASIC3.66□□□□□ -1.82
VPS4BO75351 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
VPS4BO75351 AL138726.1-201ENST00000614873 333 ntBASIC3.66□□□□□ -1.82
VPS4BO75351 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.66□□□□□ -1.82
VPS4BO75351 FP236240.3-201ENST00000623061 327 ntBASIC3.66□□□□□ -1.82
VPS4BO75351 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.66□□□□□ -1.82
VPS4BO75351 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
VPS4BO75351 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
VPS4BO75351 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
VPS4BO75351 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.65□□□□□ -1.82
VPS4BO75351 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
VPS4BO75351 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
VPS4BO75351 MIR578-201ENST00000384828 96 ntBASIC3.65□□□□□ -1.83
VPS4BO75351 RNA5SP424-201ENST00000390988 115 ntBASIC3.65□□□□□ -1.83
VPS4BO75351 Z98941.1-201ENST00000407764 100 ntBASIC3.65□□□□□ -1.83
VPS4BO75351 SNORA3.3-201ENST00000408712 125 ntBASIC3.65□□□□□ -1.83
VPS4BO75351 RNU2-33P-201ENST00000410344 192 ntBASIC3.65□□□□□ -1.83
VPS4BO75351 RN7SKP158-201ENST00000410453 326 ntBASIC3.65□□□□□ -1.83
VPS4BO75351 AC016831.2-201ENST00000417179 352 ntBASIC3.65□□□□□ -1.83
VPS4BO75351 AC006989.1-201ENST00000427212 131 ntBASIC3.65□□□□□ -1.83
VPS4BO75351 AL592045.1-201ENST00000429867 352 ntBASIC3.65□□□□□ -1.83
VPS4BO75351 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.65□□□□□ -1.83
VPS4BO75351 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.65□□□□□ -1.83
VPS4BO75351 TBCAP1-201ENST00000436520 327 ntBASIC3.65□□□□□ -1.83
VPS4BO75351 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
VPS4BO75351 RPL32P28-201ENST00000443577 397 ntBASIC3.65□□□□□ -1.83
VPS4BO75351 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.65□□□□□ -1.83
VPS4BO75351 AC007677.1-201ENST00000445757 515 ntBASIC3.65□□□□□ -1.83
VPS4BO75351 MTND1P17-201ENST00000448961 204 ntBASIC3.65□□□□□ -1.83
VPS4BO75351 AC117503.1-201ENST00000472241 394 ntBASIC3.65□□□□□ -1.83
VPS4BO75351 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.65□□□□□ -1.83
VPS4BO75351 Y_RNA.682-201ENST00000516457 100 ntBASIC3.65□□□□□ -1.83
VPS4BO75351 RNA5SP454-201ENST00000517231 127 ntBASIC3.65□□□□□ -1.83
VPS4BO75351 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.65□□□□□ -1.83
VPS4BO75351 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.65□□□□□ -1.83
VPS4BO75351 ANP32BP3-201ENST00000559213 706 ntBASIC3.65□□□□□ -1.83
VPS4BO75351 MIR1273C-201ENST00000578669 77 ntBASIC3.65□□□□□ -1.83
VPS4BO75351 ATP1B3P1-201ENST00000605365 821 ntBASIC3.65□□□□□ -1.83
VPS4BO75351 AL133255.1-201ENST00000606374 441 ntBASIC3.65□□□□□ -1.83
VPS4BO75351 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC3.65□□□□□ -1.83
VPS4BO75351 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.65□□□□□ -1.83
VPS4BO75351 Z99571.1-201ENST00000636677 394 ntBASIC3.65□□□□□ -1.83
VPS4BO75351 PWAR6-201ENST00000552334 4618 ntBASIC3.65□□□□□ -1.83
VPS4BO75351 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
VPS4BO75351 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.65□□□□□ -1.83
VPS4BO75351 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
VPS4BO75351 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
VPS4BO75351 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.64□□□□□ -1.83
VPS4BO75351 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
VPS4BO75351 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.64□□□□□ -1.83
VPS4BO75351 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.64□□□□□ -1.83
VPS4BO75351 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
VPS4BO75351 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
VPS4BO75351 AC008568.2-201ENST00000623862 2313 ntBASIC3.64□□□□□ -1.83
VPS4BO75351 RNU6-512P-201ENST00000364438 103 ntBASIC3.64□□□□□ -1.83
VPS4BO75351 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
VPS4BO75351 SNORD116-11-201ENST00000383882 92 ntBASIC3.64□□□□□ -1.83
VPS4BO75351 Y_RNA.384-201ENST00000383909 102 ntBASIC3.64□□□□□ -1.83
VPS4BO75351 Y_RNA.480-201ENST00000384364 102 ntBASIC3.64□□□□□ -1.83
VPS4BO75351 MIR450B-201ENST00000401182 78 ntBASIC3.64□□□□□ -1.83
VPS4BO75351 HSPE1P26-201ENST00000405341 275 ntBASIC3.64□□□□□ -1.83
VPS4BO75351 AC063979.1-201ENST00000415539 377 ntBASIC3.64□□□□□ -1.83
VPS4BO75351 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.64□□□□□ -1.83
VPS4BO75351 AF228730.4-201ENST00000421457 183 ntBASIC3.64□□□□□ -1.83
VPS4BO75351 AC002075.2-201ENST00000425207 252 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms