Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 RNU6-174P-201ENST00000410406 106 ntBASIC5.24□□□□□ -1.57
PTCD1O75127 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC5.24□□□□□ -1.57
PTCD1O75127 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC5.24□□□□□ -1.57
PTCD1O75127 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
PTCD1O75127 MIR892C-201ENST00000516410 77 ntBASIC5.24□□□□□ -1.57
PTCD1O75127 CBX3P8-201ENST00000532412 525 ntBASIC5.24□□□□□ -1.57
PTCD1O75127 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.24□□□□□ -1.57
PTCD1O75127 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC5.24□□□□□ -1.57
PTCD1O75127 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC5.24□□□□□ -1.57
PTCD1O75127 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC5.24□□□□□ -1.57
PTCD1O75127 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC5.24□□□□□ -1.57
PTCD1O75127 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC5.24□□□□□ -1.57
PTCD1O75127 AL121917.1-203ENST00000605534 577 ntBASIC5.24□□□□□ -1.57
PTCD1O75127 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.24□□□□□ -1.57
PTCD1O75127 AL138721.1-201ENST00000616756 179 ntBASIC5.24□□□□□ -1.57
PTCD1O75127 SDR42E1P4-201ENST00000620894 481 ntBASIC5.24□□□□□ -1.57
PTCD1O75127 AC140113.4-201ENST00000622087 222 ntBASIC5.24□□□□□ -1.57
PTCD1O75127 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC5.24□□□□□ -1.57
PTCD1O75127 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC5.24□□□□□ -1.57
PTCD1O75127 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
PTCD1O75127 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
PTCD1O75127 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
PTCD1O75127 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
PTCD1O75127 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.23□□□□□ -1.57
PTCD1O75127 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PTCD1O75127 AC004925.1-201ENST00000624256 2706 ntBASIC5.23□□□□□ -1.57
PTCD1O75127 Y_RNA.33-201ENST00000362591 102 ntBASIC5.23□□□□□ -1.57
PTCD1O75127 SNORD113-1-201ENST00000365321 69 ntBASIC5.23□□□□□ -1.57
PTCD1O75127 SNORD14.1-201ENST00000365609 90 ntBASIC5.23□□□□□ -1.57
PTCD1O75127 RNU6-395P-201ENST00000365662 106 ntBASIC5.23□□□□□ -1.57
PTCD1O75127 MIR124-3-201ENST00000384866 87 ntBASIC5.23□□□□□ -1.57
PTCD1O75127 RNU6-1156P-201ENST00000410365 100 ntBASIC5.23□□□□□ -1.57
PTCD1O75127 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.23□□□□□ -1.57
PTCD1O75127 RBMY1KP-201ENST00000423480 476 ntBASIC5.23□□□□□ -1.57
PTCD1O75127 USP9YP7-201ENST00000436723 430 ntBASIC5.23□□□□□ -1.57
PTCD1O75127 AC073587.1-201ENST00000447093 876 ntBASIC5.23□□□□□ -1.57
PTCD1O75127 USP9YP32-201ENST00000452432 430 ntBASIC5.23□□□□□ -1.57
PTCD1O75127 CREM-226ENST00000469949 721 ntTSL 3 BASIC5.23□□□□□ -1.57
PTCD1O75127 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC5.23□□□□□ -1.57
PTCD1O75127 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.23□□□□□ -1.57
PTCD1O75127 TRAV37-201ENST00000553906 342 ntBASIC5.23□□□□□ -1.57
PTCD1O75127 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC5.23□□□□□ -1.57
PTCD1O75127 AC025627.2-201ENST00000576220 160 ntBASIC5.23□□□□□ -1.57
PTCD1O75127 AC130289.1-201ENST00000577321 73 ntBASIC5.23□□□□□ -1.57
PTCD1O75127 AC012433.1-201ENST00000588916 398 ntBASIC5.23□□□□□ -1.57
PTCD1O75127 AC010900.2-201ENST00000604508 210 ntBASIC5.23□□□□□ -1.57
PTCD1O75127 RNA5SP108-201ENST00000605921 117 ntBASIC5.23□□□□□ -1.57
PTCD1O75127 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC5.23□□□□□ -1.57
PTCD1O75127 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PTCD1O75127 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.23□□□□□ -1.57
PTCD1O75127 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
PTCD1O75127 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PTCD1O75127 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
PTCD1O75127 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.23□□□□□ -1.57
PTCD1O75127 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC5.23□□□□□ -1.57
PTCD1O75127 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PTCD1O75127 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
PTCD1O75127 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PTCD1O75127 AC139713.2-215ENST00000641428 5037 ntBASIC5.22□□□□□ -1.57
PTCD1O75127 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.22□□□□□ -1.57
PTCD1O75127 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
PTCD1O75127 ANKRD36BP1-201ENST00000358576 1779 ntBASIC5.22□□□□□ -1.57
PTCD1O75127 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.22□□□□□ -1.57
PTCD1O75127 SNORA60-201ENST00000362396 134 ntBASIC5.22□□□□□ -1.57
PTCD1O75127 Y_RNA.274-201ENST00000364714 101 ntBASIC5.22□□□□□ -1.57
PTCD1O75127 RNU6-596P-201ENST00000365395 98 ntBASIC5.22□□□□□ -1.57
PTCD1O75127 RNU6-886P-201ENST00000384319 105 ntBASIC5.22□□□□□ -1.57
PTCD1O75127 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.22□□□□□ -1.57
PTCD1O75127 RAC1P3-201ENST00000416129 580 ntBASIC5.22□□□□□ -1.57
PTCD1O75127 AC091390.3-201ENST00000426478 338 ntBASIC5.22□□□□□ -1.57
PTCD1O75127 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.22□□□□□ -1.57
PTCD1O75127 RN7SL323P-201ENST00000494712 295 ntBASIC5.22□□□□□ -1.57
PTCD1O75127 OR5D17P-201ENST00000531492 978 ntBASIC5.22□□□□□ -1.57
PTCD1O75127 TRAV32-201ENST00000553993 340 ntBASIC5.22□□□□□ -1.57
PTCD1O75127 MIR3944-201ENST00000581277 108 ntBASIC5.22□□□□□ -1.57
PTCD1O75127 AL161798.1-201ENST00000604630 131 ntBASIC5.22□□□□□ -1.57
PTCD1O75127 RAC1P9-201ENST00000604990 392 ntBASIC5.22□□□□□ -1.57
PTCD1O75127 MIR4272-201ENST00000635924 64 ntBASIC5.22□□□□□ -1.57
PTCD1O75127 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
PTCD1O75127 NCAPGP1-201ENST00000505112 1814 ntBASIC5.22□□□□□ -1.57
PTCD1O75127 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
PTCD1O75127 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PTCD1O75127 Z82217.1-201ENST00000625157 8149 ntBASIC5.21□□□□□ -1.57
PTCD1O75127 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
PTCD1O75127 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
PTCD1O75127 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
PTCD1O75127 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PTCD1O75127 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PTCD1O75127 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
PTCD1O75127 SNORA63.1-201ENST00000362493 131 ntBASIC5.21□□□□□ -1.58
PTCD1O75127 RNY1P16-201ENST00000363063 111 ntBASIC5.21□□□□□ -1.58
PTCD1O75127 RNY3P11-201ENST00000364153 102 ntBASIC5.21□□□□□ -1.58
PTCD1O75127 RNU6-125P-201ENST00000384505 107 ntBASIC5.21□□□□□ -1.58
PTCD1O75127 Y_RNA.539-201ENST00000384635 107 ntBASIC5.21□□□□□ -1.58
PTCD1O75127 Y_RNA.577-201ENST00000384794 101 ntBASIC5.21□□□□□ -1.58
PTCD1O75127 RN7SKP156-201ENST00000410308 342 ntBASIC5.21□□□□□ -1.58
PTCD1O75127 RNU6-1025P-201ENST00000410629 104 ntBASIC5.21□□□□□ -1.58
PTCD1O75127 AC244098.2-201ENST00000422068 99 ntBASIC5.21□□□□□ -1.58
PTCD1O75127 RPL23AP65-201ENST00000475608 468 ntBASIC5.21□□□□□ -1.58
PTCD1O75127 AC026784.1-201ENST00000507986 352 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms