Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 RN7SL432P-201ENST00000484057 298 ntBASIC2.95□□□□□ -1.94
LMX1BO60663 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
LMX1BO60663 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.95□□□□□ -1.94
LMX1BO60663 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.95□□□□□ -1.94
LMX1BO60663 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.95□□□□□ -1.94
LMX1BO60663 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.95□□□□□ -1.94
LMX1BO60663 HMGN1P28-201ENST00000521340 364 ntBASIC2.95□□□□□ -1.94
LMX1BO60663 MTND4P7-201ENST00000523876 130 ntBASIC2.95□□□□□ -1.94
LMX1BO60663 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.95□□□□□ -1.94
LMX1BO60663 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.95□□□□□ -1.94
LMX1BO60663 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
LMX1BO60663 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.95□□□□□ -1.94
LMX1BO60663 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
LMX1BO60663 OR11H5P-201ENST00000554039 926 ntBASIC2.95□□□□□ -1.94
LMX1BO60663 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.95□□□□□ -1.94
LMX1BO60663 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC2.95□□□□□ -1.94
LMX1BO60663 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC2.95□□□□□ -1.94
LMX1BO60663 RPL23AP84-201ENST00000571193 464 ntBASIC2.95□□□□□ -1.94
LMX1BO60663 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.95□□□□□ -1.94
LMX1BO60663 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.95□□□□□ -1.94
LMX1BO60663 MIR4298-201ENST00000584380 73 ntBASIC2.95□□□□□ -1.94
LMX1BO60663 POLR3GP2-201ENST00000588366 668 ntBASIC2.95□□□□□ -1.94
LMX1BO60663 LLPHP1-201ENST00000603571 367 ntBASIC2.95□□□□□ -1.94
LMX1BO60663 AC005034.5-201ENST00000604219 466 ntBASIC2.95□□□□□ -1.94
LMX1BO60663 AC007619.2-201ENST00000605743 379 ntBASIC2.95□□□□□ -1.94
LMX1BO60663 Z82243.1-201ENST00000609432 473 ntBASIC2.95□□□□□ -1.94
LMX1BO60663 AC064836.2-201ENST00000609491 462 ntBASIC2.95□□□□□ -1.94
LMX1BO60663 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
LMX1BO60663 AC104237.2-201ENST00000612456 443 ntBASIC2.95□□□□□ -1.94
LMX1BO60663 DUSP12P1-201ENST00000612874 516 ntBASIC2.95□□□□□ -1.94
LMX1BO60663 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.95□□□□□ -1.94
LMX1BO60663 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
LMX1BO60663 AL137003.2-201ENST00000606924 2538 ntBASIC2.95□□□□□ -1.94
LMX1BO60663 GABPAP-201ENST00000419271 1356 ntBASIC2.95□□□□□ -1.94
LMX1BO60663 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
LMX1BO60663 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
LMX1BO60663 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
LMX1BO60663 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC2.94□□□□□ -1.94
LMX1BO60663 RNU1-75P-201ENST00000347264 129 ntBASIC2.94□□□□□ -1.94
LMX1BO60663 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
LMX1BO60663 NDUFS5P1-201ENST00000405668 289 ntBASIC2.94□□□□□ -1.94
LMX1BO60663 RNU4-14P-201ENST00000410858 122 ntBASIC2.94□□□□□ -1.94
LMX1BO60663 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.94□□□□□ -1.94
LMX1BO60663 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC2.94□□□□□ -1.94
LMX1BO60663 RPL31P12-201ENST00000422587 358 ntBASIC2.94□□□□□ -1.94
LMX1BO60663 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC2.94□□□□□ -1.94
LMX1BO60663 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.94□□□□□ -1.94
LMX1BO60663 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.94□□□□□ -1.94
LMX1BO60663 AC008264.1-201ENST00000447612 367 ntBASIC2.94□□□□□ -1.94
LMX1BO60663 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.94□□□□□ -1.94
LMX1BO60663 PPP1R2P5-201ENST00000457256 603 ntBASIC2.94□□□□□ -1.94
LMX1BO60663 RPL7P43-201ENST00000478876 753 ntBASIC2.94□□□□□ -1.94
LMX1BO60663 AC092451.1-201ENST00000480211 153 ntBASIC2.94□□□□□ -1.94
LMX1BO60663 AC023141.12-201ENST00000512399 199 ntBASIC2.94□□□□□ -1.94
LMX1BO60663 AC026801.2-201ENST00000515352 425 ntBASIC2.94□□□□□ -1.94
LMX1BO60663 SNORA31.3-201ENST00000516029 96 ntBASIC2.94□□□□□ -1.94
LMX1BO60663 RNU2-58P-201ENST00000516403 183 ntBASIC2.94□□□□□ -1.94
LMX1BO60663 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.94□□□□□ -1.94
LMX1BO60663 AC090136.1-201ENST00000520009 240 ntBASIC2.94□□□□□ -1.94
LMX1BO60663 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.94□□□□□ -1.94
LMX1BO60663 AP005597.4-201ENST00000526762 229 ntBASIC2.94□□□□□ -1.94
LMX1BO60663 AC005476.1-201ENST00000554427 397 ntBASIC2.94□□□□□ -1.94
LMX1BO60663 AC005951.2-201ENST00000576282 495 ntBASIC2.94□□□□□ -1.94
LMX1BO60663 AF038458.1-201ENST00000588406 262 ntBASIC2.94□□□□□ -1.94
LMX1BO60663 AL670379.6-201ENST00000603753 252 ntBASIC2.94□□□□□ -1.94
LMX1BO60663 AC008162.1-201ENST00000604718 254 ntBASIC2.94□□□□□ -1.94
LMX1BO60663 AL670379.1-201ENST00000604752 252 ntBASIC2.94□□□□□ -1.94
LMX1BO60663 IGHV3-29-201ENST00000604817 344 ntBASIC2.94□□□□□ -1.94
LMX1BO60663 AL670379.5-201ENST00000605253 252 ntBASIC2.94□□□□□ -1.94
LMX1BO60663 AL670379.8-201ENST00000605353 252 ntBASIC2.94□□□□□ -1.94
LMX1BO60663 AL670379.7-201ENST00000605823 252 ntBASIC2.94□□□□□ -1.94
LMX1BO60663 RNA5SP108-201ENST00000605921 117 ntBASIC2.94□□□□□ -1.94
LMX1BO60663 AL133255.1-201ENST00000606374 441 ntBASIC2.94□□□□□ -1.94
LMX1BO60663 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.94□□□□□ -1.94
LMX1BO60663 AL589994.2-201ENST00000621124 579 ntBASIC2.94□□□□□ -1.94
LMX1BO60663 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC2.94□□□□□ -1.94
LMX1BO60663 U6.114-201ENST00000636407 96 ntBASIC2.94□□□□□ -1.94
LMX1BO60663 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
LMX1BO60663 AC007496.3-201ENST00000624987 3443 ntBASIC2.94□□□□□ -1.94
LMX1BO60663 MFSD8-233ENST00000641482 4860 ntBASIC2.94□□□□□ -1.94
LMX1BO60663 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
LMX1BO60663 MTND5P3-201ENST00000438536 1800 ntBASIC2.93□□□□□ -1.94
LMX1BO60663 AC009812.4-201ENST00000569134 1805 ntBASIC2.93□□□□□ -1.94
LMX1BO60663 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC2.93□□□□□ -1.94
LMX1BO60663 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
LMX1BO60663 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
LMX1BO60663 Y_RNA.132-201ENST00000363421 102 ntBASIC2.93□□□□□ -1.94
LMX1BO60663 Y_RNA.326-201ENST00000365176 113 ntBASIC2.93□□□□□ -1.94
LMX1BO60663 CRP-203ENST00000368111 512 ntTSL 3 BASIC2.93□□□□□ -1.94
LMX1BO60663 Y_RNA.414-201ENST00000384011 101 ntBASIC2.93□□□□□ -1.94
LMX1BO60663 RNU6-76P-201ENST00000384060 104 ntBASIC2.93□□□□□ -1.94
LMX1BO60663 Y_RNA.530-201ENST00000384587 101 ntBASIC2.93□□□□□ -1.94
LMX1BO60663 RNU6-837P-201ENST00000391056 108 ntBASIC2.93□□□□□ -1.94
LMX1BO60663 AL592114.1-201ENST00000403842 483 ntBASIC2.93□□□□□ -1.94
LMX1BO60663 RNU2-37P-201ENST00000410695 177 ntBASIC2.93□□□□□ -1.94
LMX1BO60663 RN7SKP140-201ENST00000411196 284 ntBASIC2.93□□□□□ -1.94
LMX1BO60663 AC092809.3-201ENST00000415453 231 ntBASIC2.93□□□□□ -1.94
LMX1BO60663 USP9YP20-201ENST00000419224 558 ntBASIC2.93□□□□□ -1.94
LMX1BO60663 AC079780.1-201ENST00000428259 207 ntBASIC2.93□□□□□ -1.94
LMX1BO60663 AC005300.1-201ENST00000428401 373 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms