Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 AC009901.1-201ENST00000506703 541 ntBASIC4.76□□□□□ -1.65
GRIN3BO60391 RNU6-914P-201ENST00000516749 109 ntBASIC4.76□□□□□ -1.65
GRIN3BO60391 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
GRIN3BO60391 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC4.76□□□□□ -1.65
GRIN3BO60391 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC4.76□□□□□ -1.65
GRIN3BO60391 AL356489.2-201ENST00000566968 3528 ntBASIC4.76□□□□□ -1.65
GRIN3BO60391 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.76□□□□□ -1.65
GRIN3BO60391 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.76□□□□□ -1.65
GRIN3BO60391 AC034102.8-201ENST00000615146 484 ntBASIC4.76□□□□□ -1.65
GRIN3BO60391 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC4.76□□□□□ -1.65
GRIN3BO60391 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.76□□□□□ -1.65
GRIN3BO60391 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.76□□□□□ -1.65
GRIN3BO60391 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
GRIN3BO60391 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.76□□□□□ -1.65
GRIN3BO60391 PNPT1P2-201ENST00000456768 2050 ntBASIC4.76□□□□□ -1.65
GRIN3BO60391 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
GRIN3BO60391 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
GRIN3BO60391 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
GRIN3BO60391 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
GRIN3BO60391 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.75□□□□□ -1.65
GRIN3BO60391 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
GRIN3BO60391 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
GRIN3BO60391 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
GRIN3BO60391 RNA5SP126-201ENST00000365092 109 ntBASIC4.75□□□□□ -1.65
GRIN3BO60391 Y_RNA.404-201ENST00000383978 102 ntBASIC4.75□□□□□ -1.65
GRIN3BO60391 RNU6-1074P-201ENST00000383995 104 ntBASIC4.75□□□□□ -1.65
GRIN3BO60391 RNU6-1106P-201ENST00000390845 107 ntBASIC4.75□□□□□ -1.65
GRIN3BO60391 MRPL42P3-201ENST00000401492 326 ntBASIC4.75□□□□□ -1.65
GRIN3BO60391 Z99755.1-201ENST00000414048 380 ntBASIC4.75□□□□□ -1.65
GRIN3BO60391 AC025518.1-201ENST00000479856 347 ntBASIC4.75□□□□□ -1.65
GRIN3BO60391 VN1R104P-201ENST00000505115 1009 ntBASIC4.75□□□□□ -1.65
GRIN3BO60391 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.75□□□□□ -1.65
GRIN3BO60391 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC4.75□□□□□ -1.65
GRIN3BO60391 AC069113.1-201ENST00000517763 267 ntBASIC4.75□□□□□ -1.65
GRIN3BO60391 AP003122.3-201ENST00000526316 255 ntBASIC4.75□□□□□ -1.65
GRIN3BO60391 AL161423.1-201ENST00000613700 262 ntBASIC4.75□□□□□ -1.65
GRIN3BO60391 AC092608.2-201ENST00000624427 218 ntBASIC4.75□□□□□ -1.65
GRIN3BO60391 MIR6715B-201ENST00000637172 77 ntBASIC4.75□□□□□ -1.65
GRIN3BO60391 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
GRIN3BO60391 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
GRIN3BO60391 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
GRIN3BO60391 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
GRIN3BO60391 CEP170P1-201ENST00000502249 4587 ntBASIC4.75□□□□□ -1.65
GRIN3BO60391 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.75□□□□□ -1.65
GRIN3BO60391 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
GRIN3BO60391 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
GRIN3BO60391 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
GRIN3BO60391 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
GRIN3BO60391 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.74□□□□□ -1.65
GRIN3BO60391 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
GRIN3BO60391 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
GRIN3BO60391 AL513331.1-201ENST00000411908 397 ntBASIC4.74□□□□□ -1.65
GRIN3BO60391 MTCO1P39-201ENST00000426148 480 ntBASIC4.74□□□□□ -1.65
GRIN3BO60391 AC087650.1-201ENST00000431445 468 ntBASIC4.74□□□□□ -1.65
GRIN3BO60391 BTF3P15-201ENST00000455606 336 ntBASIC4.74□□□□□ -1.65
GRIN3BO60391 AC087588.1-201ENST00000462203 316 ntBASIC4.74□□□□□ -1.65
GRIN3BO60391 AC084198.1-201ENST00000477747 402 ntBASIC4.74□□□□□ -1.65
GRIN3BO60391 HSPE1P6-201ENST00000479457 291 ntBASIC4.74□□□□□ -1.65
GRIN3BO60391 RN7SL271P-201ENST00000487601 295 ntBASIC4.74□□□□□ -1.65
GRIN3BO60391 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.74□□□□□ -1.65
GRIN3BO60391 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC4.74□□□□□ -1.65
GRIN3BO60391 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.74□□□□□ -1.65
GRIN3BO60391 AC087369.1-201ENST00000520775 996 ntBASIC4.74□□□□□ -1.65
GRIN3BO60391 AC025423.5-201ENST00000550230 219 ntBASIC4.74□□□□□ -1.65
GRIN3BO60391 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC4.74□□□□□ -1.65
GRIN3BO60391 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.74□□□□□ -1.65
GRIN3BO60391 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
GRIN3BO60391 AL133383.2-201ENST00000622958 2336 ntBASIC4.74□□□□□ -1.65
GRIN3BO60391 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
GRIN3BO60391 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
GRIN3BO60391 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.74□□□□□ -1.65
GRIN3BO60391 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
GRIN3BO60391 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.73□□□□□ -1.65
GRIN3BO60391 ZNF807-201ENST00000328088 1707 ntBASIC4.73□□□□□ -1.65
GRIN3BO60391 RNU6-490P-201ENST00000362985 107 ntBASIC4.73□□□□□ -1.65
GRIN3BO60391 Y_RNA.188-201ENST00000363952 111 ntBASIC4.73□□□□□ -1.65
GRIN3BO60391 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
GRIN3BO60391 HSPE1P8-201ENST00000406997 288 ntBASIC4.73□□□□□ -1.65
GRIN3BO60391 USMG5P1-201ENST00000425964 177 ntBASIC4.73□□□□□ -1.65
GRIN3BO60391 AC005300.1-201ENST00000428401 373 ntBASIC4.73□□□□□ -1.65
GRIN3BO60391 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.73□□□□□ -1.65
GRIN3BO60391 AC107222.1-201ENST00000510899 637 ntBASIC4.73□□□□□ -1.65
GRIN3BO60391 RNU6-470P-201ENST00000515954 104 ntBASIC4.73□□□□□ -1.65
GRIN3BO60391 RNU2-27P-201ENST00000516185 142 ntBASIC4.73□□□□□ -1.65
GRIN3BO60391 RNU6-1271P-201ENST00000517049 105 ntBASIC4.73□□□□□ -1.65
GRIN3BO60391 SNRPGP16-201ENST00000533275 226 ntBASIC4.73□□□□□ -1.65
GRIN3BO60391 AC008269.2-201ENST00000561915 1105 ntBASIC4.73□□□□□ -1.65
GRIN3BO60391 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.73□□□□□ -1.65
GRIN3BO60391 LRRC37A5P-203ENST00000580181 585 ntBASIC4.73□□□□□ -1.65
GRIN3BO60391 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
GRIN3BO60391 AC073539.2-201ENST00000597113 165 ntBASIC4.73□□□□□ -1.65
GRIN3BO60391 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC4.73□□□□□ -1.65
GRIN3BO60391 RNU1-30P-201ENST00000606575 163 ntBASIC4.73□□□□□ -1.65
GRIN3BO60391 AC002044.1-201ENST00000606707 158 ntBASIC4.73□□□□□ -1.65
GRIN3BO60391 AC006386.2-201ENST00000624491 75 ntBASIC4.73□□□□□ -1.65
GRIN3BO60391 AC012005.1-201ENST00000624575 75 ntBASIC4.73□□□□□ -1.65
GRIN3BO60391 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
GRIN3BO60391 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
GRIN3BO60391 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
GRIN3BO60391 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms