Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PRPF3O43395 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.85□□□□□ -1.79
PRPF3O43395 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.85□□□□□ -1.79
PRPF3O43395 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.85□□□□□ -1.79
PRPF3O43395 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.85□□□□□ -1.79
PRPF3O43395 MIR7975-201ENST00000619350 68 ntBASIC3.85□□□□□ -1.79
PRPF3O43395 SNORD39.4-201ENST00000620099 78 ntBASIC3.85□□□□□ -1.79
PRPF3O43395 U6.98-201ENST00000637157 84 ntBASIC3.85□□□□□ -1.79
PRPF3O43395 U2.21-201ENST00000637295 81 ntBASIC3.85□□□□□ -1.79
PRPF3O43395 AL354685.2-201ENST00000448218 1447 ntBASIC3.85□□□□□ -1.79
PRPF3O43395 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PRPF3O43395 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PRPF3O43395 NACAP2-201ENST00000318548 624 ntBASIC3.84□□□□□ -1.79
PRPF3O43395 RNU1-70P-201ENST00000362618 164 ntBASIC3.84□□□□□ -1.79
PRPF3O43395 Y_RNA.333-201ENST00000365274 102 ntBASIC3.84□□□□□ -1.79
PRPF3O43395 RNU6-393P-201ENST00000384475 107 ntBASIC3.84□□□□□ -1.79
PRPF3O43395 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
PRPF3O43395 EEF1A1P40-201ENST00000412883 573 ntBASIC3.84□□□□□ -1.79
PRPF3O43395 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.84□□□□□ -1.79
PRPF3O43395 AC099548.1-201ENST00000421443 426 ntBASIC3.84□□□□□ -1.79
PRPF3O43395 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PRPF3O43395 RPL26P9-201ENST00000457466 433 ntBASIC3.84□□□□□ -1.79
PRPF3O43395 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.84□□□□□ -1.79
PRPF3O43395 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.84□□□□□ -1.79
PRPF3O43395 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.84□□□□□ -1.79
PRPF3O43395 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PRPF3O43395 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.84□□□□□ -1.79
PRPF3O43395 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PRPF3O43395 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.84□□□□□ -1.79
PRPF3O43395 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.84□□□□□ -1.79
PRPF3O43395 MTCO3P23-201ENST00000561363 289 ntBASIC3.84□□□□□ -1.79
PRPF3O43395 AL138976.2-201ENST00000563989 694 ntBASIC3.84□□□□□ -1.79
PRPF3O43395 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.84□□□□□ -1.79
PRPF3O43395 MIR4276-201ENST00000584832 70 ntBASIC3.84□□□□□ -1.79
PRPF3O43395 MIR4424-201ENST00000585257 86 ntBASIC3.84□□□□□ -1.79
PRPF3O43395 AC012468.1-201ENST00000604888 430 ntBASIC3.84□□□□□ -1.79
PRPF3O43395 AC019176.2-201ENST00000611579 315 ntBASIC3.84□□□□□ -1.79
PRPF3O43395 WT1-AS_8.1-201ENST00000615200 275 ntBASIC3.84□□□□□ -1.79
PRPF3O43395 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
PRPF3O43395 AC084757.4-201ENST00000616350 526 ntBASIC3.84□□□□□ -1.79
PRPF3O43395 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PRPF3O43395 Z83843.1-201ENST00000604070 3685 ntBASIC3.84□□□□□ -1.8
PRPF3O43395 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.84□□□□□ -1.8
PRPF3O43395 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.84□□□□□ -1.8
PRPF3O43395 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
PRPF3O43395 AC103988.1-201ENST00000566382 2177 ntBASIC3.83□□□□□ -1.8
PRPF3O43395 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.83□□□□□ -1.8
PRPF3O43395 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.83□□□□□ -1.8
PRPF3O43395 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PRPF3O43395 MIR208A-201ENST00000362287 71 ntBASIC3.83□□□□□ -1.8
PRPF3O43395 SNORA63.1-201ENST00000362493 131 ntBASIC3.83□□□□□ -1.8
PRPF3O43395 RNU6-371P-201ENST00000364283 108 ntBASIC3.83□□□□□ -1.8
PRPF3O43395 RNU1-73P-201ENST00000383971 164 ntBASIC3.83□□□□□ -1.8
PRPF3O43395 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PRPF3O43395 BX679664.1-201ENST00000434429 253 ntBASIC3.83□□□□□ -1.8
PRPF3O43395 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.83□□□□□ -1.8
PRPF3O43395 AC010099.1-201ENST00000455434 375 ntBASIC3.83□□□□□ -1.8
PRPF3O43395 SCARNA18-201ENST00000459004 134 ntBASIC3.83□□□□□ -1.8
PRPF3O43395 RPL21P10-201ENST00000463521 490 ntBASIC3.83□□□□□ -1.8
PRPF3O43395 RNU6-928P-201ENST00000516876 104 ntBASIC3.83□□□□□ -1.8
PRPF3O43395 AP000867.2-201ENST00000532468 320 ntBASIC3.83□□□□□ -1.8
PRPF3O43395 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.83□□□□□ -1.8
PRPF3O43395 U2.17-201ENST00000611454 95 ntBASIC3.83□□□□□ -1.8
PRPF3O43395 uc_338.1-201ENST00000612113 180 ntBASIC3.83□□□□□ -1.8
PRPF3O43395 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.83□□□□□ -1.8
PRPF3O43395 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.83□□□□□ -1.8
PRPF3O43395 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.83□□□□□ -1.8
PRPF3O43395 AC004520.1-201ENST00000608362 1413 ntBASIC3.83□□□□□ -1.8
PRPF3O43395 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
PRPF3O43395 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
PRPF3O43395 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.82□□□□□ -1.8
PRPF3O43395 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PRPF3O43395 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PRPF3O43395 RNU6-451P-201ENST00000362921 107 ntBASIC3.82□□□□□ -1.8
PRPF3O43395 Y_RNA.157-201ENST00000363638 102 ntBASIC3.82□□□□□ -1.8
PRPF3O43395 RNU6-270P-201ENST00000364131 105 ntBASIC3.82□□□□□ -1.8
PRPF3O43395 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
PRPF3O43395 RNU6-198P-201ENST00000384258 104 ntBASIC3.82□□□□□ -1.8
PRPF3O43395 RNU6-1127P-201ENST00000384580 107 ntBASIC3.82□□□□□ -1.8
PRPF3O43395 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
PRPF3O43395 RNU6-1068P-201ENST00000410958 103 ntBASIC3.82□□□□□ -1.8
PRPF3O43395 RNA5SP31-201ENST00000411144 127 ntBASIC3.82□□□□□ -1.8
PRPF3O43395 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.82□□□□□ -1.8
PRPF3O43395 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.82□□□□□ -1.8
PRPF3O43395 YME1L1P1-201ENST00000429435 297 ntBASIC3.82□□□□□ -1.8
PRPF3O43395 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.82□□□□□ -1.8
PRPF3O43395 PRSS3P4-201ENST00000453323 162 ntBASIC3.82□□□□□ -1.8
PRPF3O43395 RPL12P25-201ENST00000455592 494 ntBASIC3.82□□□□□ -1.8
PRPF3O43395 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.82□□□□□ -1.8
PRPF3O43395 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.82□□□□□ -1.8
PRPF3O43395 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.82□□□□□ -1.8
PRPF3O43395 AC114786.4-201ENST00000508771 728 ntBASIC3.82□□□□□ -1.8
PRPF3O43395 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.82□□□□□ -1.8
PRPF3O43395 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.82□□□□□ -1.8
PRPF3O43395 MIR4782-201ENST00000577987 79 ntBASIC3.82□□□□□ -1.8
PRPF3O43395 AL161629.2-201ENST00000615347 275 ntBASIC3.82□□□□□ -1.8
PRPF3O43395 AC010338.1-201ENST00000621823 717 ntBASIC3.82□□□□□ -1.8
PRPF3O43395 MIR3662-201ENST00000637030 95 ntBASIC3.82□□□□□ -1.8
PRPF3O43395 MIR7153-201ENST00000637758 57 ntBASIC3.82□□□□□ -1.8
PRPF3O43395 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 146.5 ms