Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 SSXP10-201ENST00000402595 565 ntBASIC1.11□□□□□ -2.23
CHD1O14646 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC1.11□□□□□ -2.23
CHD1O14646 RPL31P60-201ENST00000478450 367 ntBASIC1.11□□□□□ -2.23
CHD1O14646 AC010186.2-204ENST00000537668 439 ntBASIC1.11□□□□□ -2.23
CHD1O14646 MIR3198-2-201ENST00000577868 80 ntBASIC1.11□□□□□ -2.23
CHD1O14646 AC011260.1-201ENST00000578420 472 ntBASIC1.11□□□□□ -2.23
CHD1O14646 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
CHD1O14646 OR2A41P-201ENST00000473586 105 ntBASIC1.1□□□□□ -2.23
CHD1O14646 RPL30P6-201ENST00000475925 342 ntBASIC1.1□□□□□ -2.23
CHD1O14646 AC021146.2-201ENST00000504736 556 ntBASIC1.1□□□□□ -2.23
CHD1O14646 RNU5F-8P-201ENST00000515941 111 ntBASIC1.1□□□□□ -2.23
CHD1O14646 SCARNA11.3-201ENST00000517276 130 ntBASIC1.1□□□□□ -2.23
CHD1O14646 AP003355.1-201ENST00000518956 587 ntBASIC1.1□□□□□ -2.23
CHD1O14646 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.1□□□□□ -2.23
CHD1O14646 AC010615.3-201ENST00000597319 394 ntBASIC1.1□□□□□ -2.23
CHD1O14646 AP003476.1-201ENST00000623984 516 ntBASIC1.1□□□□□ -2.23
CHD1O14646 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.1□□□□□ -2.23
CHD1O14646 RNU4-23P-201ENST00000362839 140 ntBASIC1.09□□□□□ -2.23
CHD1O14646 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.09□□□□□ -2.23
CHD1O14646 YWHAZP8-201ENST00000436935 731 ntBASIC1.09□□□□□ -2.23
CHD1O14646 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.09□□□□□ -2.23
CHD1O14646 AL589880.1-201ENST00000448271 287 ntBASIC1.09□□□□□ -2.23
CHD1O14646 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.09□□□□□ -2.23
CHD1O14646 AC243829.6-201ENST00000612652 106 ntBASIC1.09□□□□□ -2.23
CHD1O14646 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.09□□□□□ -2.23
CHD1O14646 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
CHD1O14646 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.09□□□□□ -2.24
CHD1O14646 MTATP6P31-201ENST00000406985 692 ntBASIC1.09□□□□□ -2.24
CHD1O14646 AC092393.1-201ENST00000439625 742 ntBASIC1.09□□□□□ -2.24
CHD1O14646 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.09□□□□□ -2.24
CHD1O14646 AC079448.1-201ENST00000449377 373 ntBASIC1.09□□□□□ -2.24
CHD1O14646 AC104164.3-201ENST00000467363 1258 ntBASIC1.09□□□□□ -2.24
CHD1O14646 AC098591.2-201ENST00000510152 315 ntBASIC1.09□□□□□ -2.24
CHD1O14646 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC1.09□□□□□ -2.24
CHD1O14646 MIR3126-201ENST00000577443 74 ntBASIC1.09□□□□□ -2.24
CHD1O14646 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
CHD1O14646 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
CHD1O14646 MIR26B-201ENST00000362251 77 ntBASIC1.08□□□□□ -2.24
CHD1O14646 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC1.08□□□□□ -2.24
CHD1O14646 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC1.08□□□□□ -2.24
CHD1O14646 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.08□□□□□ -2.24
CHD1O14646 Y_RNA.412-201ENST00000384001 104 ntBASIC1.07□□□□□ -2.24
CHD1O14646 AL158823.1-201ENST00000418441 478 ntBASIC1.07□□□□□ -2.24
CHD1O14646 MRPL35P3-201ENST00000421557 364 ntBASIC1.07□□□□□ -2.24
CHD1O14646 HMGB1P9-201ENST00000429856 646 ntBASIC1.07□□□□□ -2.24
CHD1O14646 HSPE1P21-201ENST00000438283 308 ntBASIC1.07□□□□□ -2.24
CHD1O14646 AC241584.1-201ENST00000438469 1241 ntBASIC1.07□□□□□ -2.24
CHD1O14646 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
CHD1O14646 RNU4-18P-201ENST00000516751 149 ntBASIC1.07□□□□□ -2.24
CHD1O14646 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.07□□□□□ -2.24
CHD1O14646 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.07□□□□□ -2.24
CHD1O14646 Y_RNA.471-201ENST00000384312 102 ntBASIC1.06□□□□□ -2.24
CHD1O14646 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.06□□□□□ -2.24
CHD1O14646 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC1.06□□□□□ -2.24
CHD1O14646 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC1.06□□□□□ -2.24
CHD1O14646 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.06□□□□□ -2.24
CHD1O14646 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC1.06□□□□□ -2.24
CHD1O14646 SNORA48.10-201ENST00000516965 160 ntBASIC1.06□□□□□ -2.24
CHD1O14646 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.06□□□□□ -2.24
CHD1O14646 AC090888.1-201ENST00000561335 1141 ntBASIC1.06□□□□□ -2.24
CHD1O14646 AC243960.4-201ENST00000600532 288 ntBASIC1.06□□□□□ -2.24
CHD1O14646 AC023932.2-201ENST00000603176 175 ntBASIC1.06□□□□□ -2.24
CHD1O14646 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.06□□□□□ -2.24
CHD1O14646 AC068276.1-201ENST00000605793 379 ntBASIC1.06□□□□□ -2.24
CHD1O14646 AC090132.2-201ENST00000615881 347 ntBASIC1.06□□□□□ -2.24
CHD1O14646 AL590410.1-201ENST00000617925 333 ntBASIC1.06□□□□□ -2.24
CHD1O14646 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
CHD1O14646 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
CHD1O14646 Y_RNA.280-201ENST00000364765 112 ntBASIC1.06□□□□□ -2.24
CHD1O14646 RNU6-452P-201ENST00000384406 107 ntBASIC1.06□□□□□ -2.24
CHD1O14646 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
CHD1O14646 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.06□□□□□ -2.24
CHD1O14646 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC1.06□□□□□ -2.24
CHD1O14646 TRAPPC13P1-201ENST00000435991 1062 ntBASIC1.06□□□□□ -2.24
CHD1O14646 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.06□□□□□ -2.24
CHD1O14646 AC107626.1-201ENST00000471084 183 ntBASIC1.06□□□□□ -2.24
CHD1O14646 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
CHD1O14646 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
CHD1O14646 AC112198.4-201ENST00000515450 351 ntBASIC1.06□□□□□ -2.24
CHD1O14646 LY96-202ENST00000518893 430 ntTSL 3 BASIC1.06□□□□□ -2.24
CHD1O14646 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.06□□□□□ -2.24
CHD1O14646 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
CHD1O14646 RNU6-1226P-201ENST00000384317 107 ntBASIC1.05□□□□□ -2.24
CHD1O14646 SNORA40.19-201ENST00000390846 128 ntBASIC1.05□□□□□ -2.24
CHD1O14646 RNU6-821P-201ENST00000390995 107 ntBASIC1.05□□□□□ -2.24
CHD1O14646 AL109913.1-201ENST00000421173 514 ntBASIC1.05□□□□□ -2.24
CHD1O14646 RPS20P24-201ENST00000457473 361 ntBASIC1.05□□□□□ -2.24
CHD1O14646 RNU6-351P-201ENST00000516097 100 ntBASIC1.05□□□□□ -2.24
CHD1O14646 AC025588.2-201ENST00000604851 466 ntBASIC1.05□□□□□ -2.24
CHD1O14646 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.05□□□□□ -2.24
CHD1O14646 MTND2P41-201ENST00000637599 773 ntBASIC1.05□□□□□ -2.24
CHD1O14646 AC007785.2-201ENST00000598627 1916 ntBASIC1.05□□□□□ -2.24
CHD1O14646 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.04□□□□□ -2.24
CHD1O14646 MTND4LP10-201ENST00000435146 291 ntBASIC1.04□□□□□ -2.24
CHD1O14646 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC1.04□□□□□ -2.24
CHD1O14646 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC1.04□□□□□ -2.24
CHD1O14646 KLF3P2-201ENST00000465138 268 ntBASIC1.04□□□□□ -2.24
CHD1O14646 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.04□□□□□ -2.24
CHD1O14646 MIR4713-201ENST00000582691 75 ntBASIC1.04□□□□□ -2.24
CHD1O14646 AC021646.1-201ENST00000605469 484 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms