Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CDX4O14627 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CDX4O14627 Y_RNA.6-201ENST00000362350 114 ntBASIC2.49□□□□□ -2.01
CDX4O14627 RNU6-1284P-201ENST00000363701 100 ntBASIC2.49□□□□□ -2.01
CDX4O14627 RNA5SP99-201ENST00000364020 114 ntBASIC2.49□□□□□ -2.01
CDX4O14627 RN7SKP226-201ENST00000364912 300 ntBASIC2.49□□□□□ -2.01
CDX4O14627 Y_RNA.582-201ENST00000391023 95 ntBASIC2.49□□□□□ -2.01
CDX4O14627 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CDX4O14627 FCF1P10-201ENST00000407590 479 ntBASIC2.49□□□□□ -2.01
CDX4O14627 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.49□□□□□ -2.01
CDX4O14627 AC007064.1-201ENST00000412238 351 ntBASIC2.49□□□□□ -2.01
CDX4O14627 FCF1P9-201ENST00000412546 282 ntBASIC2.49□□□□□ -2.01
CDX4O14627 SPA17P1-201ENST00000416656 452 ntBASIC2.49□□□□□ -2.01
CDX4O14627 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.49□□□□□ -2.01
CDX4O14627 AC005094.1-201ENST00000440420 368 ntBASIC2.49□□□□□ -2.01
CDX4O14627 AC093899.1-201ENST00000457984 376 ntBASIC2.49□□□□□ -2.01
CDX4O14627 RPS27AP9-201ENST00000477681 438 ntBASIC2.49□□□□□ -2.01
CDX4O14627 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.49□□□□□ -2.01
CDX4O14627 RPL21P99-201ENST00000480369 423 ntBASIC2.49□□□□□ -2.01
CDX4O14627 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.49□□□□□ -2.01
CDX4O14627 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.49□□□□□ -2.01
CDX4O14627 RNU2-46P-201ENST00000517038 113 ntBASIC2.49□□□□□ -2.01
CDX4O14627 RNU6-548P-201ENST00000517083 115 ntBASIC2.49□□□□□ -2.01
CDX4O14627 AC123904.3-201ENST00000547218 814 ntBASIC2.49□□□□□ -2.01
CDX4O14627 AC123904.2-201ENST00000548059 300 ntBASIC2.49□□□□□ -2.01
CDX4O14627 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC2.49□□□□□ -2.01
CDX4O14627 AC087883.1-201ENST00000551882 391 ntBASIC2.49□□□□□ -2.01
CDX4O14627 DNAJC8P1-201ENST00000554535 372 ntBASIC2.49□□□□□ -2.01
CDX4O14627 HMGB1P14-201ENST00000557424 591 ntBASIC2.49□□□□□ -2.01
CDX4O14627 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.49□□□□□ -2.01
CDX4O14627 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.49□□□□□ -2.01
CDX4O14627 AP001094.1-201ENST00000579805 193 ntBASIC2.49□□□□□ -2.01
CDX4O14627 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.49□□□□□ -2.01
CDX4O14627 MIR4635-201ENST00000583759 79 ntBASIC2.49□□□□□ -2.01
CDX4O14627 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.49□□□□□ -2.01
CDX4O14627 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.49□□□□□ -2.01
CDX4O14627 AP003465.2-201ENST00000602571 373 ntBASIC2.49□□□□□ -2.01
CDX4O14627 AL161729.4-201ENST00000604650 476 ntBASIC2.49□□□□□ -2.01
CDX4O14627 RNU6-87P-201ENST00000607561 108 ntBASIC2.49□□□□□ -2.01
CDX4O14627 AL391813.2-201ENST00000609113 322 ntBASIC2.49□□□□□ -2.01
CDX4O14627 AC092794.1-201ENST00000612734 582 ntBASIC2.49□□□□□ -2.01
CDX4O14627 AC090132.2-201ENST00000615881 347 ntBASIC2.49□□□□□ -2.01
CDX4O14627 AC027309.3-201ENST00000623419 351 ntBASIC2.49□□□□□ -2.01
CDX4O14627 AP003122.6-201ENST00000623831 495 ntBASIC2.49□□□□□ -2.01
CDX4O14627 PISRT1-201ENST00000626175 531 ntBASIC2.49□□□□□ -2.01
CDX4O14627 OR5AK4P-201ENST00000635912 903 ntBASIC2.49□□□□□ -2.01
CDX4O14627 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CDX4O14627 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
CDX4O14627 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
CDX4O14627 AP006437.1-201ENST00000641440 3685 ntBASIC2.49□□□□□ -2.01
CDX4O14627 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CDX4O14627 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CDX4O14627 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
CDX4O14627 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CDX4O14627 U8.3-201ENST00000363321 132 ntBASIC2.48□□□□□ -2.01
CDX4O14627 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CDX4O14627 RNU6-1027P-201ENST00000383998 107 ntBASIC2.48□□□□□ -2.01
CDX4O14627 RNU2-8P-201ENST00000410727 190 ntBASIC2.48□□□□□ -2.01
CDX4O14627 RN7SKP140-201ENST00000411196 284 ntBASIC2.48□□□□□ -2.01
CDX4O14627 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.48□□□□□ -2.01
CDX4O14627 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.48□□□□□ -2.01
CDX4O14627 C1DP2-201ENST00000418167 426 ntBASIC2.48□□□□□ -2.01
CDX4O14627 AL589872.1-201ENST00000426602 288 ntBASIC2.48□□□□□ -2.01
CDX4O14627 ISCA1P6-201ENST00000427740 390 ntBASIC2.48□□□□□ -2.01
CDX4O14627 AC073614.1-201ENST00000438690 650 ntBASIC2.48□□□□□ -2.01
CDX4O14627 CBWD4P-201ENST00000445695 655 ntBASIC2.48□□□□□ -2.01
CDX4O14627 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.48□□□□□ -2.01
CDX4O14627 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.48□□□□□ -2.01
CDX4O14627 AC105252.1-201ENST00000503089 286 ntBASIC2.48□□□□□ -2.01
CDX4O14627 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.48□□□□□ -2.01
CDX4O14627 ARL4AP2-201ENST00000507378 601 ntBASIC2.48□□□□□ -2.01
CDX4O14627 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.48□□□□□ -2.01
CDX4O14627 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.48□□□□□ -2.01
CDX4O14627 RNA5SP380-201ENST00000517190 98 ntBASIC2.48□□□□□ -2.01
CDX4O14627 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.48□□□□□ -2.01
CDX4O14627 MTND4LP26-201ENST00000518144 282 ntBASIC2.48□□□□□ -2.01
CDX4O14627 AP003467.2-201ENST00000520175 319 ntBASIC2.48□□□□□ -2.01
CDX4O14627 AC011979.2-201ENST00000527568 352 ntBASIC2.48□□□□□ -2.01
CDX4O14627 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC2.48□□□□□ -2.01
CDX4O14627 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.48□□□□□ -2.01
CDX4O14627 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.48□□□□□ -2.01
CDX4O14627 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.48□□□□□ -2.01
CDX4O14627 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.48□□□□□ -2.01
CDX4O14627 MIR3609-201ENST00000582661 80 ntBASIC2.48□□□□□ -2.01
CDX4O14627 MIR3605-201ENST00000583214 100 ntBASIC2.48□□□□□ -2.01
CDX4O14627 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.48□□□□□ -2.01
CDX4O14627 AC078899.3-201ENST00000599065 212 ntBASIC2.48□□□□□ -2.01
CDX4O14627 AC013553.2-201ENST00000604244 589 ntBASIC2.48□□□□□ -2.01
CDX4O14627 HSPE1P7-201ENST00000604681 321 ntBASIC2.48□□□□□ -2.01
CDX4O14627 AC005046.1-201ENST00000608515 625 ntBASIC2.48□□□□□ -2.01
CDX4O14627 BX664608.1-201ENST00000610519 487 ntBASIC2.48□□□□□ -2.01
CDX4O14627 AC091304.9-201ENST00000612091 226 ntBASIC2.48□□□□□ -2.01
CDX4O14627 AL020991.1-201ENST00000612314 373 ntBASIC2.48□□□□□ -2.01
CDX4O14627 uc_338.12-201ENST00000616344 181 ntBASIC2.48□□□□□ -2.01
CDX4O14627 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.48□□□□□ -2.01
CDX4O14627 SEPT14P19-203ENST00000633205 211 ntBASIC2.48□□□□□ -2.01
CDX4O14627 AC022336.2-201ENST00000568966 2538 ntBASIC2.48□□□□□ -2.01
CDX4O14627 MTND5P7-201ENST00000413558 1798 ntBASIC2.47□□□□□ -2.01
CDX4O14627 AC007785.2-201ENST00000598627 1916 ntBASIC2.47□□□□□ -2.01
CDX4O14627 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms