Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AC023538.1-201ENST00000534576 736 ntBASIC1.26□□□□□ -2.21
SDCBPO00560 HSBP1P1-201ENST00000555205 166 ntBASIC1.26□□□□□ -2.21
SDCBPO00560 AC027807.1-201ENST00000559921 996 ntBASIC1.26□□□□□ -2.21
SDCBPO00560 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.26□□□□□ -2.21
SDCBPO00560 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.26□□□□□ -2.21
SDCBPO00560 MIR3167-201ENST00000579623 85 ntBASIC1.26□□□□□ -2.21
SDCBPO00560 AF038458.1-201ENST00000588406 262 ntBASIC1.26□□□□□ -2.21
SDCBPO00560 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC1.26□□□□□ -2.21
SDCBPO00560 AC243960.4-201ENST00000600532 288 ntBASIC1.26□□□□□ -2.21
SDCBPO00560 AC106052.1-201ENST00000608029 497 ntBASIC1.26□□□□□ -2.21
SDCBPO00560 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC1.26□□□□□ -2.21
SDCBPO00560 AL109620.1-201ENST00000618738 1197 ntBASIC1.26□□□□□ -2.21
SDCBPO00560 AC079416.3-201ENST00000624479 549 ntBASIC1.26□□□□□ -2.21
SDCBPO00560 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
SDCBPO00560 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.26□□□□□ -2.21
SDCBPO00560 AL359854.1-201ENST00000614203 1594 ntBASIC1.25□□□□□ -2.21
SDCBPO00560 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
SDCBPO00560 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.25□□□□□ -2.21
SDCBPO00560 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
SDCBPO00560 RNU6-486P-201ENST00000363116 107 ntBASIC1.25□□□□□ -2.21
SDCBPO00560 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
SDCBPO00560 RNU6-1122P-201ENST00000384449 107 ntBASIC1.25□□□□□ -2.21
SDCBPO00560 AC068050.1-201ENST00000394891 380 ntBASIC1.25□□□□□ -2.21
SDCBPO00560 MIR1323-201ENST00000408090 73 ntBASIC1.25□□□□□ -2.21
SDCBPO00560 RN7SKP51-201ENST00000410781 304 ntBASIC1.25□□□□□ -2.21
SDCBPO00560 RPL26P27-201ENST00000414397 437 ntBASIC1.25□□□□□ -2.21
SDCBPO00560 CYCSP49-201ENST00000420810 319 ntBASIC1.25□□□□□ -2.21
SDCBPO00560 DNAJC19P4-201ENST00000440115 345 ntBASIC1.25□□□□□ -2.21
SDCBPO00560 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.25□□□□□ -2.21
SDCBPO00560 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
SDCBPO00560 RPL23AP6-201ENST00000446637 472 ntBASIC1.25□□□□□ -2.21
SDCBPO00560 AMD1P1-201ENST00000457220 922 ntBASIC1.25□□□□□ -2.21
SDCBPO00560 FO393415.2-201ENST00000480085 343 ntBASIC1.25□□□□□ -2.21
SDCBPO00560 AC140059.1-201ENST00000489238 361 ntBASIC1.25□□□□□ -2.21
SDCBPO00560 RPS15AP36-201ENST00000492022 382 ntBASIC1.25□□□□□ -2.21
SDCBPO00560 YWHAEP4-201ENST00000505390 198 ntBASIC1.25□□□□□ -2.21
SDCBPO00560 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
SDCBPO00560 AC117522.2-201ENST00000510049 657 ntBASIC1.25□□□□□ -2.21
SDCBPO00560 AC091965.2-201ENST00000512324 613 ntBASIC1.25□□□□□ -2.21
SDCBPO00560 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.25□□□□□ -2.21
SDCBPO00560 RNU6-927P-201ENST00000516199 100 ntBASIC1.25□□□□□ -2.21
SDCBPO00560 RNU6-548P-201ENST00000517083 115 ntBASIC1.25□□□□□ -2.21
SDCBPO00560 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.25□□□□□ -2.21
SDCBPO00560 NACAP3-201ENST00000552100 481 ntBASIC1.25□□□□□ -2.21
SDCBPO00560 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.25□□□□□ -2.21
SDCBPO00560 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.25□□□□□ -2.21
SDCBPO00560 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC1.25□□□□□ -2.21
SDCBPO00560 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.25□□□□□ -2.21
SDCBPO00560 AC025811.1-201ENST00000604312 472 ntBASIC1.25□□□□□ -2.21
SDCBPO00560 AL161798.1-201ENST00000604630 131 ntBASIC1.25□□□□□ -2.21
SDCBPO00560 AC069545.1-201ENST00000605671 358 ntBASIC1.25□□□□□ -2.21
SDCBPO00560 uc_338.14-201ENST00000613162 166 ntBASIC1.25□□□□□ -2.21
SDCBPO00560 AC108479.2-201ENST00000617314 601 ntBASIC1.25□□□□□ -2.21
SDCBPO00560 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
SDCBPO00560 AC009268.2-201ENST00000621925 457 ntBASIC1.25□□□□□ -2.21
SDCBPO00560 AC068880.4-201ENST00000623082 495 ntBASIC1.25□□□□□ -2.21
SDCBPO00560 AC008555.8-201ENST00000623602 2168 ntBASIC1.25□□□□□ -2.21
SDCBPO00560 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.25□□□□□ -2.21
SDCBPO00560 RNU1-62P-201ENST00000362599 164 ntBASIC1.24□□□□□ -2.21
SDCBPO00560 RNU6-1167P-201ENST00000363227 94 ntBASIC1.24□□□□□ -2.21
SDCBPO00560 MIR147B-201ENST00000390185 80 ntBASIC1.24□□□□□ -2.21
SDCBPO00560 SNORA67.6-201ENST00000391093 99 ntBASIC1.24□□□□□ -2.21
SDCBPO00560 AL356432.1-201ENST00000405809 419 ntBASIC1.24□□□□□ -2.21
SDCBPO00560 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC1.24□□□□□ -2.21
SDCBPO00560 MTCYBP38-201ENST00000417160 1123 ntBASIC1.24□□□□□ -2.21
SDCBPO00560 AL158823.1-201ENST00000418441 478 ntBASIC1.24□□□□□ -2.21
SDCBPO00560 AC007098.1-201ENST00000420122 367 ntBASIC1.24□□□□□ -2.21
SDCBPO00560 AL353729.1-201ENST00000425044 720 ntBASIC1.24□□□□□ -2.21
SDCBPO00560 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.24□□□□□ -2.21
SDCBPO00560 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC1.24□□□□□ -2.21
SDCBPO00560 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
SDCBPO00560 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC1.24□□□□□ -2.21
SDCBPO00560 AC009238.1-201ENST00000442165 424 ntBASIC1.24□□□□□ -2.21
SDCBPO00560 MTCO3P45-201ENST00000443036 613 ntBASIC1.24□□□□□ -2.21
SDCBPO00560 AC009237.6-201ENST00000446969 424 ntBASIC1.24□□□□□ -2.21
SDCBPO00560 AC020550.1-201ENST00000447385 163 ntBASIC1.24□□□□□ -2.21
SDCBPO00560 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.24□□□□□ -2.21
SDCBPO00560 SNORD13-201ENST00000459299 104 ntBASIC1.24□□□□□ -2.21
SDCBPO00560 AC005410.1-202ENST00000460347 485 ntBASIC1.24□□□□□ -2.21
SDCBPO00560 AC139453.3-201ENST00000493276 369 ntBASIC1.24□□□□□ -2.21
SDCBPO00560 AC008628.1-201ENST00000508663 265 ntBASIC1.24□□□□□ -2.21
SDCBPO00560 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC1.24□□□□□ -2.21
SDCBPO00560 MTND5P13-201ENST00000513046 1079 ntBASIC1.24□□□□□ -2.21
SDCBPO00560 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.24□□□□□ -2.21
SDCBPO00560 RNA5SP61-201ENST00000516453 100 ntBASIC1.24□□□□□ -2.21
SDCBPO00560 RNA5SP137-201ENST00000516833 135 ntBASIC1.24□□□□□ -2.21
SDCBPO00560 RNU6-703P-201ENST00000516946 107 ntBASIC1.24□□□□□ -2.21
SDCBPO00560 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.24□□□□□ -2.21
SDCBPO00560 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.24□□□□□ -2.21
SDCBPO00560 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.24□□□□□ -2.21
SDCBPO00560 AL121821.2-201ENST00000556081 394 ntBASIC1.24□□□□□ -2.21
SDCBPO00560 AL354943.1-201ENST00000572103 781 ntBASIC1.24□□□□□ -2.21
SDCBPO00560 MIR3912-201ENST00000577566 105 ntBASIC1.24□□□□□ -2.21
SDCBPO00560 AL031274.2-201ENST00000599419 203 ntBASIC1.24□□□□□ -2.21
SDCBPO00560 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.24□□□□□ -2.21
SDCBPO00560 AC098826.3-201ENST00000603823 466 ntBASIC1.24□□□□□ -2.21
SDCBPO00560 AC104763.2-201ENST00000604179 382 ntBASIC1.24□□□□□ -2.21
SDCBPO00560 AC099785.1-201ENST00000605697 437 ntBASIC1.24□□□□□ -2.21
SDCBPO00560 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.24□□□□□ -2.21
SDCBPO00560 AC126118.1-201ENST00000607744 628 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms