Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC009487.2-201ENST00000420969 6821 ntBASIC2.88□□□□□ -1.95
O00370 HSPE1P11-201ENST00000339579 310 ntBASIC2.88□□□□□ -1.95
O00370 RNU6-512P-201ENST00000364438 103 ntBASIC2.88□□□□□ -1.95
O00370 Y_RNA.296-201ENST00000364930 108 ntBASIC2.88□□□□□ -1.95
O00370 RNU6-282P-201ENST00000365357 103 ntBASIC2.88□□□□□ -1.95
O00370 RNU5E-6P-201ENST00000365574 115 ntBASIC2.88□□□□□ -1.95
O00370 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
O00370 SMIM11P1-201ENST00000369586 178 ntBASIC2.88□□□□□ -1.95
O00370 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
O00370 RNU6-456P-201ENST00000384493 107 ntBASIC2.88□□□□□ -1.95
O00370 MIR627-201ENST00000384979 97 ntBASIC2.88□□□□□ -1.95
O00370 BX682237.1-201ENST00000415016 335 ntBASIC2.88□□□□□ -1.95
O00370 MORF4L1P6-201ENST00000418771 268 ntBASIC2.88□□□□□ -1.95
O00370 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.88□□□□□ -1.95
O00370 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.88□□□□□ -1.95
O00370 AC133104.1-201ENST00000429100 218 ntBASIC2.88□□□□□ -1.95
O00370 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.88□□□□□ -1.95
O00370 RPS15AP27-201ENST00000449183 343 ntBASIC2.88□□□□□ -1.95
O00370 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.88□□□□□ -1.95
O00370 RPL31P41-201ENST00000477967 372 ntBASIC2.88□□□□□ -1.95
O00370 RNA5SP471-201ENST00000516971 106 ntBASIC2.88□□□□□ -1.95
O00370 RN7SKP258-201ENST00000517151 304 ntBASIC2.88□□□□□ -1.95
O00370 AP006587.4-201ENST00000526053 529 ntBASIC2.88□□□□□ -1.95
O00370 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.88□□□□□ -1.95
O00370 HSPE1P20-201ENST00000538133 289 ntBASIC2.88□□□□□ -1.95
O00370 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.88□□□□□ -1.95
O00370 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.88□□□□□ -1.95
O00370 AC138761.3-201ENST00000579993 334 ntBASIC2.88□□□□□ -1.95
O00370 ELOCP29-201ENST00000588193 334 ntBASIC2.88□□□□□ -1.95
O00370 AC068790.2-201ENST00000602601 557 ntBASIC2.88□□□□□ -1.95
O00370 AP000787.2-201ENST00000604432 568 ntBASIC2.88□□□□□ -1.95
O00370 AC007363.1-201ENST00000604736 620 ntBASIC2.88□□□□□ -1.95
O00370 ATP1B3P1-201ENST00000605365 821 ntBASIC2.88□□□□□ -1.95
O00370 AL158032.1-201ENST00000605401 106 ntBASIC2.88□□□□□ -1.95
O00370 AC005332.10-201ENST00000612725 619 ntBASIC2.88□□□□□ -1.95
O00370 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
O00370 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.88□□□□□ -1.95
O00370 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
O00370 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
O00370 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.87□□□□□ -1.95
O00370 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
O00370 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
O00370 SNORA25.6-201ENST00000364121 118 ntBASIC2.87□□□□□ -1.95
O00370 RNU6-190P-201ENST00000384154 102 ntBASIC2.87□□□□□ -1.95
O00370 Y_RNA.517-201ENST00000384551 106 ntBASIC2.87□□□□□ -1.95
O00370 MIR9-1-201ENST00000385198 89 ntBASIC2.87□□□□□ -1.95
O00370 RNU2-16P-201ENST00000410712 136 ntBASIC2.87□□□□□ -1.95
O00370 AL365496.1-201ENST00000426885 215 ntBASIC2.87□□□□□ -1.95
O00370 AL451074.3-201ENST00000437709 472 ntBASIC2.87□□□□□ -1.95
O00370 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.87□□□□□ -1.95
O00370 MTCYBP1-201ENST00000454315 1119 ntBASIC2.87□□□□□ -1.95
O00370 C1DP4-201ENST00000455429 424 ntBASIC2.87□□□□□ -1.95
O00370 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.87□□□□□ -1.95
O00370 AC087588.1-201ENST00000462203 316 ntBASIC2.87□□□□□ -1.95
O00370 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.87□□□□□ -1.95
O00370 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.87□□□□□ -1.95
O00370 SUB1P2-201ENST00000556401 297 ntBASIC2.87□□□□□ -1.95
O00370 GTF3AP2-201ENST00000557014 266 ntBASIC2.87□□□□□ -1.95
O00370 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.87□□□□□ -1.95
O00370 AC009063.1-201ENST00000563342 702 ntBASIC2.87□□□□□ -1.95
O00370 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.87□□□□□ -1.95
O00370 AC098848.2-201ENST00000588023 330 ntBASIC2.87□□□□□ -1.95
O00370 AC005498.1-201ENST00000592125 465 ntBASIC2.87□□□□□ -1.95
O00370 AL136363.2-201ENST00000604173 851 ntBASIC2.87□□□□□ -1.95
O00370 AL121992.2-201ENST00000606262 256 ntBASIC2.87□□□□□ -1.95
O00370 AP002360.4-201ENST00000606980 481 ntBASIC2.87□□□□□ -1.95
O00370 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.87□□□□□ -1.95
O00370 Z99129.1-201ENST00000612510 255 ntBASIC2.87□□□□□ -1.95
O00370 CR381653.2-201ENST00000624041 768 ntBASIC2.87□□□□□ -1.95
O00370 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.87□□□□□ -1.95
O00370 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
O00370 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.87□□□□□ -1.95
O00370 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.87□□□□□ -1.95
O00370 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
O00370 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
O00370 CR848007.1-201ENST00000442354 1699 ntBASIC2.86□□□□□ -1.95
O00370 UBE2L2-201ENST00000254302 429 ntBASIC2.86□□□□□ -1.95
O00370 RNU6-623P-201ENST00000363143 105 ntBASIC2.86□□□□□ -1.95
O00370 RNU6-169P-201ENST00000365336 107 ntBASIC2.86□□□□□ -1.95
O00370 RNU6-946P-201ENST00000383878 107 ntBASIC2.86□□□□□ -1.95
O00370 RNU5A-6P-201ENST00000384136 116 ntBASIC2.86□□□□□ -1.95
O00370 Y_RNA.510-201ENST00000384511 114 ntBASIC2.86□□□□□ -1.95
O00370 AL512633.1-201ENST00000399931 655 ntBASIC2.86□□□□□ -1.95
O00370 RNU2-33P-201ENST00000410344 192 ntBASIC2.86□□□□□ -1.95
O00370 RNU2-39P-201ENST00000410604 198 ntBASIC2.86□□□□□ -1.95
O00370 AC092809.3-201ENST00000415453 231 ntBASIC2.86□□□□□ -1.95
O00370 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.86□□□□□ -1.95
O00370 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.86□□□□□ -1.95
O00370 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.86□□□□□ -1.95
O00370 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.86□□□□□ -1.95
O00370 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.86□□□□□ -1.95
O00370 AC236972.1-201ENST00000433225 199 ntBASIC2.86□□□□□ -1.95
O00370 Z82210.1-201ENST00000440037 231 ntBASIC2.86□□□□□ -1.95
O00370 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
O00370 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.86□□□□□ -1.95
O00370 AC093899.1-201ENST00000457984 376 ntBASIC2.86□□□□□ -1.95
O00370 RPS20P22-201ENST00000473700 357 ntBASIC2.86□□□□□ -1.95
O00370 UBE2DNL-203ENST00000474922 222 ntBASIC2.86□□□□□ -1.95
O00370 AC004924.1-201ENST00000480160 781 ntBASIC2.86□□□□□ -1.95
O00370 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms