Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 HSPE1P21-201ENST00000438283 308 ntBASIC0.66□□□□□ -2.3
CNOT1A5YKK6 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
CNOT1A5YKK6 AC103851.1-201ENST00000506833 274 ntBASIC0.66□□□□□ -2.3
CNOT1A5YKK6 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC0.66□□□□□ -2.3
CNOT1A5YKK6 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC0.66□□□□□ -2.3
CNOT1A5YKK6 MIR4299-201ENST00000577899 72 ntBASIC0.66□□□□□ -2.3
CNOT1A5YKK6 AC023932.2-201ENST00000603176 175 ntBASIC0.66□□□□□ -2.3
CNOT1A5YKK6 AP001330.4-201ENST00000604350 154 ntBASIC0.66□□□□□ -2.3
CNOT1A5YKK6 AC108676.2-201ENST00000605225 163 ntBASIC0.66□□□□□ -2.3
CNOT1A5YKK6 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC0.66□□□□□ -2.3
CNOT1A5YKK6 AL360181.4-201ENST00000621752 134 ntBASIC0.66□□□□□ -2.3
CNOT1A5YKK6 OR4G3P-201ENST00000633500 913 ntBASIC0.66□□□□□ -2.3
CNOT1A5YKK6 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
CNOT1A5YKK6 ELL2P3-201ENST00000457883 1602 ntBASIC0.66□□□□□ -2.3
CNOT1A5YKK6 MTND5P11-201ENST00000511037 1812 ntBASIC0.66□□□□□ -2.3
CNOT1A5YKK6 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC0.66□□□□□ -2.3
CNOT1A5YKK6 ZNF702P-202ENST00000434269 1966 ntBASIC0.66□□□□□ -2.3
CNOT1A5YKK6 AL136372.1-201ENST00000403060 228 ntBASIC0.65□□□□□ -2.3
CNOT1A5YKK6 AC092628.1-201ENST00000436250 252 ntBASIC0.65□□□□□ -2.3
CNOT1A5YKK6 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.65□□□□□ -2.3
CNOT1A5YKK6 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC0.65□□□□□ -2.3
CNOT1A5YKK6 AC010186.2-204ENST00000537668 439 ntBASIC0.65□□□□□ -2.3
CNOT1A5YKK6 AC025588.2-201ENST00000604851 466 ntBASIC0.65□□□□□ -2.3
CNOT1A5YKK6 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC0.65□□□□□ -2.3
CNOT1A5YKK6 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
CNOT1A5YKK6 RNA5SP63-201ENST00000391225 112 ntBASIC0.65□□□□□ -2.31
CNOT1A5YKK6 OR9R1P-201ENST00000412200 877 ntBASIC0.65□□□□□ -2.31
CNOT1A5YKK6 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC0.65□□□□□ -2.31
CNOT1A5YKK6 RPL23AP6-201ENST00000446637 472 ntBASIC0.65□□□□□ -2.31
CNOT1A5YKK6 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC0.65□□□□□ -2.31
CNOT1A5YKK6 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC0.65□□□□□ -2.31
CNOT1A5YKK6 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.65□□□□□ -2.31
CNOT1A5YKK6 SCARNA11.3-201ENST00000517276 130 ntBASIC0.65□□□□□ -2.31
CNOT1A5YKK6 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC0.65□□□□□ -2.31
CNOT1A5YKK6 MTND2P26-201ENST00000528255 1029 ntBASIC0.65□□□□□ -2.31
CNOT1A5YKK6 AC015849.6-201ENST00000605454 474 ntBASIC0.65□□□□□ -2.31
CNOT1A5YKK6 AL592148.2-201ENST00000612210 372 ntBASIC0.65□□□□□ -2.31
CNOT1A5YKK6 AP002791.1-201ENST00000623291 381 ntBASIC0.65□□□□□ -2.31
CNOT1A5YKK6 MTCO1P23-201ENST00000415223 1526 ntBASIC0.65□□□□□ -2.31
CNOT1A5YKK6 MIR1468-201ENST00000410600 86 ntBASIC0.64□□□□□ -2.31
CNOT1A5YKK6 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC0.64□□□□□ -2.31
CNOT1A5YKK6 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC0.64□□□□□ -2.31
CNOT1A5YKK6 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC0.64□□□□□ -2.31
CNOT1A5YKK6 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC0.64□□□□□ -2.31
CNOT1A5YKK6 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC0.64□□□□□ -2.31
CNOT1A5YKK6 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC0.64□□□□□ -2.31
CNOT1A5YKK6 AC010809.3-201ENST00000621310 641 ntBASIC0.64□□□□□ -2.31
CNOT1A5YKK6 MIR508-201ENST00000384857 115 ntBASIC0.64□□□□□ -2.31
CNOT1A5YKK6 AL365496.1-201ENST00000426885 215 ntBASIC0.64□□□□□ -2.31
CNOT1A5YKK6 AL606489.2-201ENST00000433886 234 ntBASIC0.64□□□□□ -2.31
CNOT1A5YKK6 SNRPGP12-201ENST00000449481 213 ntBASIC0.64□□□□□ -2.31
CNOT1A5YKK6 RNU6-229P-201ENST00000516614 102 ntBASIC0.64□□□□□ -2.31
CNOT1A5YKK6 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
CNOT1A5YKK6 AL133241.1-201ENST00000556832 487 ntBASIC0.64□□□□□ -2.31
CNOT1A5YKK6 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.64□□□□□ -2.31
CNOT1A5YKK6 AC074051.3-201ENST00000570238 358 ntBASIC0.64□□□□□ -2.31
CNOT1A5YKK6 AC040174.2-201ENST00000602701 465 ntBASIC0.64□□□□□ -2.31
CNOT1A5YKK6 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.64□□□□□ -2.31
CNOT1A5YKK6 AP003476.1-201ENST00000623984 516 ntBASIC0.64□□□□□ -2.31
CNOT1A5YKK6 SNORA25.8-201ENST00000364831 128 ntBASIC0.63□□□□□ -2.31
CNOT1A5YKK6 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
CNOT1A5YKK6 AC118469.1-201ENST00000442943 488 ntBASIC0.63□□□□□ -2.31
CNOT1A5YKK6 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.63□□□□□ -2.31
CNOT1A5YKK6 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.63□□□□□ -2.31
CNOT1A5YKK6 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.63□□□□□ -2.31
CNOT1A5YKK6 SUMO2P2-201ENST00000456482 255 ntBASIC0.63□□□□□ -2.31
CNOT1A5YKK6 RNU6-319P-201ENST00000516025 108 ntBASIC0.63□□□□□ -2.31
CNOT1A5YKK6 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC0.63□□□□□ -2.31
CNOT1A5YKK6 AC021646.1-201ENST00000605469 484 ntBASIC0.63□□□□□ -2.31
CNOT1A5YKK6 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
CNOT1A5YKK6 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
CNOT1A5YKK6 AC007785.2-201ENST00000598627 1916 ntBASIC0.63□□□□□ -2.31
CNOT1A5YKK6 AL356473.1-201ENST00000406203 1408 ntBASIC0.63□□□□□ -2.31
CNOT1A5YKK6 AC016716.1-201ENST00000265882 708 ntBASIC0.63□□□□□ -2.31
CNOT1A5YKK6 AL109913.1-201ENST00000421173 514 ntBASIC0.63□□□□□ -2.31
CNOT1A5YKK6 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.63□□□□□ -2.31
CNOT1A5YKK6 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC0.63□□□□□ -2.31
CNOT1A5YKK6 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.63□□□□□ -2.31
CNOT1A5YKK6 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC0.63□□□□□ -2.31
CNOT1A5YKK6 AL590365.1-201ENST00000450788 243 ntBASIC0.63□□□□□ -2.31
CNOT1A5YKK6 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC0.63□□□□□ -2.31
CNOT1A5YKK6 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC0.63□□□□□ -2.31
CNOT1A5YKK6 SSR3-208ENST00000496050 579 ntTSL 4 BASIC0.63□□□□□ -2.31
CNOT1A5YKK6 UBL5P1-201ENST00000507979 193 ntBASIC0.63□□□□□ -2.31
CNOT1A5YKK6 TPT1P8-201ENST00000510120 555 ntBASIC0.63□□□□□ -2.31
CNOT1A5YKK6 SCARNA3-201ENST00000517097 143 ntBASIC0.63□□□□□ -2.31
CNOT1A5YKK6 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC0.63□□□□□ -2.31
CNOT1A5YKK6 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
CNOT1A5YKK6 AL022718.1-201ENST00000412004 84 ntBASIC0.62□□□□□ -2.31
CNOT1A5YKK6 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.62□□□□□ -2.31
CNOT1A5YKK6 AL161788.1-201ENST00000441805 169 ntBASIC0.62□□□□□ -2.31
CNOT1A5YKK6 TPTE2P6-202ENST00000445572 1007 ntBASIC0.62□□□□□ -2.31
CNOT1A5YKK6 RNU6-420P-201ENST00000458780 107 ntBASIC0.62□□□□□ -2.31
CNOT1A5YKK6 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC0.62□□□□□ -2.31
CNOT1A5YKK6 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
CNOT1A5YKK6 MZT1P2-201ENST00000604387 248 ntBASIC0.62□□□□□ -2.31
CNOT1A5YKK6 AL513185.3-201ENST00000433335 1300 ntBASIC0.62□□□□□ -2.31
CNOT1A5YKK6 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC0.62□□□□□ -2.31
CNOT1A5YKK6 RNA5SP276-201ENST00000362580 94 ntBASIC0.62□□□□□ -2.31
CNOT1A5YKK6 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms