Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 AC092447.10-201ENST00000620607 1652 ntBASIC1.38□□□□□ -2.19
TRAV41A0A0B4J266 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.38□□□□□ -2.19
TRAV41A0A0B4J266 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.38□□□□□ -2.19
TRAV41A0A0B4J266 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
TRAV41A0A0B4J266 Z98749.2-208ENST00000381646 500 ntBASIC1.37□□□□□ -2.19
TRAV41A0A0B4J266 AL356432.1-201ENST00000405809 419 ntBASIC1.37□□□□□ -2.19
TRAV41A0A0B4J266 RPL26P27-201ENST00000414397 437 ntBASIC1.37□□□□□ -2.19
TRAV41A0A0B4J266 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC1.37□□□□□ -2.19
TRAV41A0A0B4J266 AC019070.1-201ENST00000415008 1024 ntBASIC1.37□□□□□ -2.19
TRAV41A0A0B4J266 MTCYBP38-201ENST00000417160 1123 ntBASIC1.37□□□□□ -2.19
TRAV41A0A0B4J266 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.37□□□□□ -2.19
TRAV41A0A0B4J266 AL953862.1-201ENST00000423016 168 ntBASIC1.37□□□□□ -2.19
TRAV41A0A0B4J266 GTF2IP3-201ENST00000433887 494 ntBASIC1.37□□□□□ -2.19
TRAV41A0A0B4J266 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC1.37□□□□□ -2.19
TRAV41A0A0B4J266 HMGN2P10-201ENST00000448085 265 ntBASIC1.37□□□□□ -2.19
TRAV41A0A0B4J266 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.37□□□□□ -2.19
TRAV41A0A0B4J266 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC1.37□□□□□ -2.19
TRAV41A0A0B4J266 AC013267.1-201ENST00000458227 267 ntBASIC1.37□□□□□ -2.19
TRAV41A0A0B4J266 AC008481.1-201ENST00000463278 396 ntBASIC1.37□□□□□ -2.19
TRAV41A0A0B4J266 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC1.37□□□□□ -2.19
TRAV41A0A0B4J266 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.37□□□□□ -2.19
TRAV41A0A0B4J266 MTND5P13-201ENST00000513046 1079 ntBASIC1.37□□□□□ -2.19
TRAV41A0A0B4J266 OR5AL2P-201ENST00000532185 920 ntBASIC1.37□□□□□ -2.19
TRAV41A0A0B4J266 DUXAP1-201ENST00000556632 463 ntBASIC1.37□□□□□ -2.19
TRAV41A0A0B4J266 AC021739.1-201ENST00000559631 174 ntBASIC1.37□□□□□ -2.19
TRAV41A0A0B4J266 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.37□□□□□ -2.19
TRAV41A0A0B4J266 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC1.37□□□□□ -2.19
TRAV41A0A0B4J266 ROCK1P1-201ENST00000573767 549 ntBASIC1.37□□□□□ -2.19
TRAV41A0A0B4J266 AC024614.2-201ENST00000577584 372 ntBASIC1.37□□□□□ -2.19
TRAV41A0A0B4J266 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.37□□□□□ -2.19
TRAV41A0A0B4J266 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC1.37□□□□□ -2.19
TRAV41A0A0B4J266 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.37□□□□□ -2.19
TRAV41A0A0B4J266 AC243960.4-201ENST00000600532 288 ntBASIC1.37□□□□□ -2.19
TRAV41A0A0B4J266 AC073544.2-201ENST00000601155 540 ntBASIC1.37□□□□□ -2.19
TRAV41A0A0B4J266 AL161798.1-201ENST00000604630 131 ntBASIC1.37□□□□□ -2.19
TRAV41A0A0B4J266 AL355297.2-201ENST00000604792 129 ntBASIC1.37□□□□□ -2.19
TRAV41A0A0B4J266 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.37□□□□□ -2.19
TRAV41A0A0B4J266 AC091834.1-201ENST00000614543 472 ntBASIC1.37□□□□□ -2.19
TRAV41A0A0B4J266 AC123767.1-202ENST00000620407 817 ntBASIC1.37□□□□□ -2.19
TRAV41A0A0B4J266 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.37□□□□□ -2.19
TRAV41A0A0B4J266 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.36□□□□□ -2.19
TRAV41A0A0B4J266 RNA5SP276-201ENST00000362580 94 ntBASIC1.36□□□□□ -2.19
TRAV41A0A0B4J266 RNU6-1167P-201ENST00000363227 94 ntBASIC1.36□□□□□ -2.19
TRAV41A0A0B4J266 RNA5SP240-201ENST00000365355 128 ntBASIC1.36□□□□□ -2.19
TRAV41A0A0B4J266 USP9YP26-201ENST00000421008 661 ntBASIC1.36□□□□□ -2.19
TRAV41A0A0B4J266 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.36□□□□□ -2.19
TRAV41A0A0B4J266 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.36□□□□□ -2.19
TRAV41A0A0B4J266 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
TRAV41A0A0B4J266 AC009238.1-201ENST00000442165 424 ntBASIC1.36□□□□□ -2.19
TRAV41A0A0B4J266 USP9YP15-201ENST00000442391 422 ntBASIC1.36□□□□□ -2.19
TRAV41A0A0B4J266 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC1.36□□□□□ -2.19
TRAV41A0A0B4J266 AC007677.1-201ENST00000445757 515 ntBASIC1.36□□□□□ -2.19
TRAV41A0A0B4J266 RPL23AP6-201ENST00000446637 472 ntBASIC1.36□□□□□ -2.19
TRAV41A0A0B4J266 AC009237.6-201ENST00000446969 424 ntBASIC1.36□□□□□ -2.19
TRAV41A0A0B4J266 AL136380.1-201ENST00000447970 162 ntBASIC1.36□□□□□ -2.19
TRAV41A0A0B4J266 FDX1P2-201ENST00000450769 375 ntBASIC1.36□□□□□ -2.19
TRAV41A0A0B4J266 ZNF886P-201ENST00000450781 723 ntBASIC1.36□□□□□ -2.19
TRAV41A0A0B4J266 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC1.36□□□□□ -2.19
TRAV41A0A0B4J266 MEMO1P3-201ENST00000459811 302 ntBASIC1.36□□□□□ -2.19
TRAV41A0A0B4J266 AC010631.1-201ENST00000474150 156 ntBASIC1.36□□□□□ -2.19
TRAV41A0A0B4J266 AC104563.1-201ENST00000476147 376 ntBASIC1.36□□□□□ -2.19
TRAV41A0A0B4J266 SUMO2P5-201ENST00000506790 245 ntBASIC1.36□□□□□ -2.19
TRAV41A0A0B4J266 AC021146.8-201ENST00000507455 733 ntBASIC1.36□□□□□ -2.19
TRAV41A0A0B4J266 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
TRAV41A0A0B4J266 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.36□□□□□ -2.19
TRAV41A0A0B4J266 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.36□□□□□ -2.19
TRAV41A0A0B4J266 SNORA25.15-201ENST00000516487 89 ntBASIC1.36□□□□□ -2.19
TRAV41A0A0B4J266 RNU6-548P-201ENST00000517083 115 ntBASIC1.36□□□□□ -2.19
TRAV41A0A0B4J266 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.36□□□□□ -2.19
TRAV41A0A0B4J266 EEF1A1P37-201ENST00000522748 715 ntBASIC1.36□□□□□ -2.19
TRAV41A0A0B4J266 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.36□□□□□ -2.19
TRAV41A0A0B4J266 AP005639.2-201ENST00000527592 928 ntBASIC1.36□□□□□ -2.19
TRAV41A0A0B4J266 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.36□□□□□ -2.19
TRAV41A0A0B4J266 RPL21P136-201ENST00000605378 396 ntBASIC1.36□□□□□ -2.19
TRAV41A0A0B4J266 AC112220.2-201ENST00000605513 533 ntBASIC1.36□□□□□ -2.19
TRAV41A0A0B4J266 AC006270.3-201ENST00000605967 1036 ntBASIC1.36□□□□□ -2.19
TRAV41A0A0B4J266 MIR502-201ENST00000606349 86 ntBASIC1.36□□□□□ -2.19
TRAV41A0A0B4J266 AL773524.1-201ENST00000614065 229 ntBASIC1.36□□□□□ -2.19
TRAV41A0A0B4J266 AC009233.1-201ENST00000616477 371 ntBASIC1.36□□□□□ -2.19
TRAV41A0A0B4J266 AC079416.3-201ENST00000624479 549 ntBASIC1.36□□□□□ -2.19
TRAV41A0A0B4J266 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.35□□□□□ -2.19
TRAV41A0A0B4J266 RNU1-72P-201ENST00000362976 153 ntBASIC1.35□□□□□ -2.19
TRAV41A0A0B4J266 Y_RNA.472-201ENST00000384322 102 ntBASIC1.35□□□□□ -2.19
TRAV41A0A0B4J266 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.35□□□□□ -2.19
TRAV41A0A0B4J266 AL353729.1-201ENST00000425044 720 ntBASIC1.35□□□□□ -2.19
TRAV41A0A0B4J266 TOMM20P4-201ENST00000427861 435 ntBASIC1.35□□□□□ -2.19
TRAV41A0A0B4J266 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
TRAV41A0A0B4J266 AC244035.1-201ENST00000430042 390 ntBASIC1.35□□□□□ -2.19
TRAV41A0A0B4J266 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.35□□□□□ -2.19
TRAV41A0A0B4J266 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.35□□□□□ -2.19
TRAV41A0A0B4J266 AL161651.1-201ENST00000440882 223 ntBASIC1.35□□□□□ -2.19
TRAV41A0A0B4J266 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC1.35□□□□□ -2.19
TRAV41A0A0B4J266 FABP5P15-201ENST00000453566 214 ntBASIC1.35□□□□□ -2.19
TRAV41A0A0B4J266 AP001324.2-201ENST00000461163 319 ntBASIC1.35□□□□□ -2.19
TRAV41A0A0B4J266 AC079203.1-201ENST00000487972 404 ntBASIC1.35□□□□□ -2.19
TRAV41A0A0B4J266 AC139453.3-201ENST00000493276 369 ntBASIC1.35□□□□□ -2.19
TRAV41A0A0B4J266 FAM92A1P2-202ENST00000504766 877 ntBASIC1.35□□□□□ -2.19
TRAV41A0A0B4J266 AC020699.1-201ENST00000505161 445 ntBASIC1.35□□□□□ -2.19
TRAV41A0A0B4J266 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.35□□□□□ -2.19
TRAV41A0A0B4J266 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms