Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.79□□□□□ -2.12
USH1CQ9Y6N9 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.78□□□□□ -2.12
USH1CQ9Y6N9 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.78□□□□□ -2.12
USH1CQ9Y6N9 RNU6-658P-201ENST00000384606 106 ntBASIC1.78□□□□□ -2.12
USH1CQ9Y6N9 RNU6-19P-201ENST00000384718 107 ntBASIC1.78□□□□□ -2.12
USH1CQ9Y6N9 RNU4-26P-201ENST00000410270 107 ntBASIC1.78□□□□□ -2.12
USH1CQ9Y6N9 AL445685.2-201ENST00000422551 342 ntBASIC1.78□□□□□ -2.12
USH1CQ9Y6N9 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.78□□□□□ -2.12
USH1CQ9Y6N9 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.78□□□□□ -2.12
USH1CQ9Y6N9 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.78□□□□□ -2.12
USH1CQ9Y6N9 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.78□□□□□ -2.12
USH1CQ9Y6N9 RPL7P12-201ENST00000446719 750 ntBASIC1.78□□□□□ -2.12
USH1CQ9Y6N9 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.78□□□□□ -2.12
USH1CQ9Y6N9 AC005410.1-202ENST00000460347 485 ntBASIC1.78□□□□□ -2.12
USH1CQ9Y6N9 AP001324.2-201ENST00000461163 319 ntBASIC1.78□□□□□ -2.12
USH1CQ9Y6N9 RPL21P99-201ENST00000480369 423 ntBASIC1.78□□□□□ -2.12
USH1CQ9Y6N9 AC007182.2-201ENST00000489251 402 ntBASIC1.78□□□□□ -2.12
USH1CQ9Y6N9 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.78□□□□□ -2.12
USH1CQ9Y6N9 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.78□□□□□ -2.12
USH1CQ9Y6N9 AC023538.1-201ENST00000534576 736 ntBASIC1.78□□□□□ -2.12
USH1CQ9Y6N9 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.78□□□□□ -2.12
USH1CQ9Y6N9 MIR4529-201ENST00000578110 78 ntBASIC1.78□□□□□ -2.12
USH1CQ9Y6N9 AC022662.1-201ENST00000580252 331 ntBASIC1.78□□□□□ -2.12
USH1CQ9Y6N9 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.78□□□□□ -2.12
USH1CQ9Y6N9 AL355598.1-201ENST00000604169 202 ntBASIC1.78□□□□□ -2.12
USH1CQ9Y6N9 AC104763.2-201ENST00000604179 382 ntBASIC1.78□□□□□ -2.12
USH1CQ9Y6N9 AL138963.2-201ENST00000605137 226 ntBASIC1.78□□□□□ -2.12
USH1CQ9Y6N9 AC004908.2-201ENST00000609090 574 ntBASIC1.78□□□□□ -2.12
USH1CQ9Y6N9 DUSP12P1-201ENST00000612874 516 ntBASIC1.78□□□□□ -2.12
USH1CQ9Y6N9 AP000943.4-201ENST00000622912 357 ntBASIC1.78□□□□□ -2.12
USH1CQ9Y6N9 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.77□□□□□ -2.13
USH1CQ9Y6N9 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.77□□□□□ -2.13
USH1CQ9Y6N9 SNORA40.2-201ENST00000390847 128 ntBASIC1.77□□□□□ -2.13
USH1CQ9Y6N9 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC1.77□□□□□ -2.13
USH1CQ9Y6N9 USP9YP26-201ENST00000421008 661 ntBASIC1.77□□□□□ -2.13
USH1CQ9Y6N9 AC244035.1-201ENST00000430042 390 ntBASIC1.77□□□□□ -2.13
USH1CQ9Y6N9 GPM6BP2-201ENST00000432046 144 ntBASIC1.77□□□□□ -2.13
USH1CQ9Y6N9 RPL36AP53-201ENST00000432891 316 ntBASIC1.77□□□□□ -2.13
USH1CQ9Y6N9 IFNA20P-201ENST00000436840 528 ntBASIC1.77□□□□□ -2.13
USH1CQ9Y6N9 GPM6BP1-201ENST00000446387 144 ntBASIC1.77□□□□□ -2.13
USH1CQ9Y6N9 RPL21P134-201ENST00000453468 483 ntBASIC1.77□□□□□ -2.13
USH1CQ9Y6N9 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.77□□□□□ -2.13
USH1CQ9Y6N9 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC1.77□□□□□ -2.13
USH1CQ9Y6N9 MEMO1P3-201ENST00000459811 302 ntBASIC1.77□□□□□ -2.13
USH1CQ9Y6N9 RPL37P6-201ENST00000460682 294 ntBASIC1.77□□□□□ -2.13
USH1CQ9Y6N9 AC010631.1-201ENST00000474150 156 ntBASIC1.77□□□□□ -2.13
USH1CQ9Y6N9 AC107032.1-201ENST00000485945 480 ntBASIC1.77□□□□□ -2.13
USH1CQ9Y6N9 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC1.77□□□□□ -2.13
USH1CQ9Y6N9 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.77□□□□□ -2.13
USH1CQ9Y6N9 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.77□□□□□ -2.13
USH1CQ9Y6N9 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC1.77□□□□□ -2.13
USH1CQ9Y6N9 YWHAZP1-201ENST00000556286 722 ntBASIC1.77□□□□□ -2.13
USH1CQ9Y6N9 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.77□□□□□ -2.13
USH1CQ9Y6N9 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
USH1CQ9Y6N9 ROCK1P1-201ENST00000573767 549 ntBASIC1.77□□□□□ -2.13
USH1CQ9Y6N9 MIR3126-201ENST00000577443 74 ntBASIC1.77□□□□□ -2.13
USH1CQ9Y6N9 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
USH1CQ9Y6N9 NRBF2P1-201ENST00000587407 859 ntBASIC1.77□□□□□ -2.13
USH1CQ9Y6N9 MTCYBP22-201ENST00000603788 447 ntBASIC1.77□□□□□ -2.13
USH1CQ9Y6N9 AC098826.3-201ENST00000603823 466 ntBASIC1.77□□□□□ -2.13
USH1CQ9Y6N9 AL161798.1-201ENST00000604630 131 ntBASIC1.77□□□□□ -2.13
USH1CQ9Y6N9 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
USH1CQ9Y6N9 AC011939.3-201ENST00000613686 466 ntBASIC1.77□□□□□ -2.13
USH1CQ9Y6N9 U4atac.1-201ENST00000618345 95 ntBASIC1.77□□□□□ -2.13
USH1CQ9Y6N9 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC1.77□□□□□ -2.13
USH1CQ9Y6N9 AC116618.1-201ENST00000634617 774 ntBASIC1.77□□□□□ -2.13
USH1CQ9Y6N9 SNORD114-1-201ENST00000362705 72 ntBASIC1.76□□□□□ -2.13
USH1CQ9Y6N9 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
USH1CQ9Y6N9 SNORD56-201ENST00000413522 71 ntBASIC1.76□□□□□ -2.13
USH1CQ9Y6N9 RPL21P24-201ENST00000413752 448 ntBASIC1.76□□□□□ -2.13
USH1CQ9Y6N9 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.76□□□□□ -2.13
USH1CQ9Y6N9 PTGES3P4-201ENST00000426243 356 ntBASIC1.76□□□□□ -2.13
USH1CQ9Y6N9 RPL23AP76-201ENST00000441860 458 ntBASIC1.76□□□□□ -2.13
USH1CQ9Y6N9 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC1.76□□□□□ -2.13
USH1CQ9Y6N9 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC1.76□□□□□ -2.13
USH1CQ9Y6N9 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC1.76□□□□□ -2.13
USH1CQ9Y6N9 AC079203.1-201ENST00000487972 404 ntBASIC1.76□□□□□ -2.13
USH1CQ9Y6N9 AC106872.3-201ENST00000495104 446 ntBASIC1.76□□□□□ -2.13
USH1CQ9Y6N9 AC113347.3-201ENST00000509113 148 ntBASIC1.76□□□□□ -2.13
USH1CQ9Y6N9 AC093809.1-201ENST00000509155 340 ntBASIC1.76□□□□□ -2.13
USH1CQ9Y6N9 AC107393.1-201ENST00000512403 346 ntBASIC1.76□□□□□ -2.13
USH1CQ9Y6N9 MRPS33P3-201ENST00000513456 322 ntBASIC1.76□□□□□ -2.13
USH1CQ9Y6N9 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC1.76□□□□□ -2.13
USH1CQ9Y6N9 SMURF2P1-201ENST00000514992 481 ntBASIC1.76□□□□□ -2.13
USH1CQ9Y6N9 SNORA25.11-201ENST00000515935 105 ntBASIC1.76□□□□□ -2.13
USH1CQ9Y6N9 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.76□□□□□ -2.13
USH1CQ9Y6N9 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.76□□□□□ -2.13
USH1CQ9Y6N9 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC1.76□□□□□ -2.13
USH1CQ9Y6N9 LRRC6P1-201ENST00000532188 885 ntBASIC1.76□□□□□ -2.13
USH1CQ9Y6N9 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.76□□□□□ -2.13
USH1CQ9Y6N9 MRPS36P5-201ENST00000551909 298 ntBASIC1.76□□□□□ -2.13
USH1CQ9Y6N9 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.76□□□□□ -2.13
USH1CQ9Y6N9 AC060771.1-201ENST00000582031 164 ntBASIC1.76□□□□□ -2.13
USH1CQ9Y6N9 AC073544.2-201ENST00000601155 540 ntBASIC1.76□□□□□ -2.13
USH1CQ9Y6N9 AC021171.1-201ENST00000603137 706 ntBASIC1.76□□□□□ -2.13
USH1CQ9Y6N9 AL158211.2-201ENST00000607282 395 ntBASIC1.76□□□□□ -2.13
USH1CQ9Y6N9 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.76□□□□□ -2.13
USH1CQ9Y6N9 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
USH1CQ9Y6N9 AC024581.2-201ENST00000619986 252 ntBASIC1.76□□□□□ -2.13
USH1CQ9Y6N9 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms