Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 snoU13.15-201ENST00000459407 104 ntBASIC0.98□□□□□ -2.25
COMMD3Q9UBI1 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC0.98□□□□□ -2.25
COMMD3Q9UBI1 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC0.98□□□□□ -2.25
COMMD3Q9UBI1 NRON-201ENST00000517270 370 ntBASIC0.98□□□□□ -2.25
COMMD3Q9UBI1 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
COMMD3Q9UBI1 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC0.98□□□□□ -2.25
COMMD3Q9UBI1 AP003497.1-201ENST00000528472 562 ntBASIC0.98□□□□□ -2.25
COMMD3Q9UBI1 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC0.98□□□□□ -2.25
COMMD3Q9UBI1 AL161670.1-201ENST00000554348 137 ntBASIC0.98□□□□□ -2.25
COMMD3Q9UBI1 DNAJC19P9-201ENST00000555084 351 ntBASIC0.98□□□□□ -2.25
COMMD3Q9UBI1 AC027807.1-201ENST00000559921 996 ntBASIC0.98□□□□□ -2.25
COMMD3Q9UBI1 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC0.98□□□□□ -2.25
COMMD3Q9UBI1 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.98□□□□□ -2.25
COMMD3Q9UBI1 MIR3660-201ENST00000584845 100 ntBASIC0.98□□□□□ -2.25
COMMD3Q9UBI1 BNIP3P23-201ENST00000599655 511 ntBASIC0.98□□□□□ -2.25
COMMD3Q9UBI1 AL670379.6-201ENST00000603753 252 ntBASIC0.98□□□□□ -2.25
COMMD3Q9UBI1 AL670379.11-201ENST00000604059 253 ntBASIC0.98□□□□□ -2.25
COMMD3Q9UBI1 AL670379.10-201ENST00000604330 253 ntBASIC0.98□□□□□ -2.25
COMMD3Q9UBI1 AC008162.1-201ENST00000604718 254 ntBASIC0.98□□□□□ -2.25
COMMD3Q9UBI1 AL670379.1-201ENST00000604752 252 ntBASIC0.98□□□□□ -2.25
COMMD3Q9UBI1 AL670379.2-201ENST00000604983 252 ntBASIC0.98□□□□□ -2.25
COMMD3Q9UBI1 AL670379.5-201ENST00000605253 252 ntBASIC0.98□□□□□ -2.25
COMMD3Q9UBI1 AL670379.4-201ENST00000605279 254 ntBASIC0.98□□□□□ -2.25
COMMD3Q9UBI1 AL670379.12-201ENST00000605291 253 ntBASIC0.98□□□□□ -2.25
COMMD3Q9UBI1 AL670379.8-201ENST00000605353 252 ntBASIC0.98□□□□□ -2.25
COMMD3Q9UBI1 AL670379.9-201ENST00000605428 253 ntBASIC0.98□□□□□ -2.25
COMMD3Q9UBI1 AL670379.7-201ENST00000605823 252 ntBASIC0.98□□□□□ -2.25
COMMD3Q9UBI1 AC239868.4-201ENST00000608318 671 ntBASIC0.98□□□□□ -2.25
COMMD3Q9UBI1 Z75746.1-201ENST00000440243 2080 ntBASIC0.98□□□□□ -2.25
COMMD3Q9UBI1 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
COMMD3Q9UBI1 AP000560.1-201ENST00000624150 1937 ntBASIC0.97□□□□□ -2.25
COMMD3Q9UBI1 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
COMMD3Q9UBI1 RNU4-91P-201ENST00000364778 135 ntBASIC0.97□□□□□ -2.25
COMMD3Q9UBI1 SNORA22-201ENST00000383907 134 ntBASIC0.97□□□□□ -2.25
COMMD3Q9UBI1 SNORA22C-201ENST00000384614 134 ntBASIC0.97□□□□□ -2.25
COMMD3Q9UBI1 MIR23A-201ENST00000385245 73 ntBASIC0.97□□□□□ -2.25
COMMD3Q9UBI1 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
COMMD3Q9UBI1 CYCSP49-201ENST00000420810 319 ntBASIC0.97□□□□□ -2.25
COMMD3Q9UBI1 RAC1P8-201ENST00000427086 527 ntBASIC0.97□□□□□ -2.25
COMMD3Q9UBI1 RPL7P34-201ENST00000433316 712 ntBASIC0.97□□□□□ -2.25
COMMD3Q9UBI1 SNRPEP9-201ENST00000436794 238 ntBASIC0.97□□□□□ -2.25
COMMD3Q9UBI1 AC002542.1-201ENST00000440683 193 ntBASIC0.97□□□□□ -2.25
COMMD3Q9UBI1 AL161651.1-201ENST00000440882 223 ntBASIC0.97□□□□□ -2.25
COMMD3Q9UBI1 NDUFAF4P2-201ENST00000445374 520 ntBASIC0.97□□□□□ -2.25
COMMD3Q9UBI1 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC0.97□□□□□ -2.25
COMMD3Q9UBI1 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC0.97□□□□□ -2.25
COMMD3Q9UBI1 AC099513.1-201ENST00000490423 301 ntBASIC0.97□□□□□ -2.25
COMMD3Q9UBI1 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.97□□□□□ -2.25
COMMD3Q9UBI1 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC0.97□□□□□ -2.25
COMMD3Q9UBI1 AP000916.1-201ENST00000533869 835 ntBASIC0.97□□□□□ -2.25
COMMD3Q9UBI1 AC021739.1-201ENST00000559631 174 ntBASIC0.97□□□□□ -2.25
COMMD3Q9UBI1 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC0.97□□□□□ -2.25
COMMD3Q9UBI1 BNIP3P24-201ENST00000593398 557 ntBASIC0.97□□□□□ -2.25
COMMD3Q9UBI1 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC0.97□□□□□ -2.25
COMMD3Q9UBI1 AC073413.2-201ENST00000604332 360 ntBASIC0.97□□□□□ -2.25
COMMD3Q9UBI1 AC004853.1-201ENST00000604902 698 ntBASIC0.97□□□□□ -2.25
COMMD3Q9UBI1 AL359314.1-201ENST00000616913 261 ntBASIC0.97□□□□□ -2.25
COMMD3Q9UBI1 U1.36-201ENST00000620684 176 ntBASIC0.97□□□□□ -2.25
COMMD3Q9UBI1 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
COMMD3Q9UBI1 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
COMMD3Q9UBI1 NF1-214ENST00000490416 1329 ntTSL 3 BASIC0.96□□□□□ -2.26
COMMD3Q9UBI1 MIR29C-201ENST00000385231 88 ntBASIC0.96□□□□□ -2.26
COMMD3Q9UBI1 CCNG1P1-201ENST00000406783 885 ntBASIC0.96□□□□□ -2.26
COMMD3Q9UBI1 MIR1289-2-201ENST00000408360 111 ntBASIC0.96□□□□□ -2.26
COMMD3Q9UBI1 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.96□□□□□ -2.26
COMMD3Q9UBI1 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC0.96□□□□□ -2.26
COMMD3Q9UBI1 RPL26P27-201ENST00000414397 437 ntBASIC0.96□□□□□ -2.26
COMMD3Q9UBI1 AC097463.2-201ENST00000421074 142 ntBASIC0.96□□□□□ -2.26
COMMD3Q9UBI1 OOSP1P1-201ENST00000423265 274 ntBASIC0.96□□□□□ -2.26
COMMD3Q9UBI1 TOMM22P2-201ENST00000430735 237 ntBASIC0.96□□□□□ -2.26
COMMD3Q9UBI1 MTND2P5-201ENST00000432656 1006 ntBASIC0.96□□□□□ -2.26
COMMD3Q9UBI1 RPL23AP76-201ENST00000441860 458 ntBASIC0.96□□□□□ -2.26
COMMD3Q9UBI1 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.96□□□□□ -2.26
COMMD3Q9UBI1 KATNBL1P6-201ENST00000453433 915 ntBASIC0.96□□□□□ -2.26
COMMD3Q9UBI1 FCF1P6-201ENST00000456841 595 ntBASIC0.96□□□□□ -2.26
COMMD3Q9UBI1 snoU13.26-201ENST00000459452 105 ntBASIC0.96□□□□□ -2.26
COMMD3Q9UBI1 OR2A41P-201ENST00000473586 105 ntBASIC0.96□□□□□ -2.26
COMMD3Q9UBI1 AC092902.1-201ENST00000486999 259 ntBASIC0.96□□□□□ -2.26
COMMD3Q9UBI1 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC0.96□□□□□ -2.26
COMMD3Q9UBI1 RNU6-885P-201ENST00000516607 104 ntBASIC0.96□□□□□ -2.26
COMMD3Q9UBI1 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.96□□□□□ -2.26
COMMD3Q9UBI1 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC0.96□□□□□ -2.26
COMMD3Q9UBI1 ROCK1P1-201ENST00000573767 549 ntBASIC0.96□□□□□ -2.26
COMMD3Q9UBI1 AC005951.2-201ENST00000576282 495 ntBASIC0.96□□□□□ -2.26
COMMD3Q9UBI1 MIR3167-201ENST00000579623 85 ntBASIC0.96□□□□□ -2.26
COMMD3Q9UBI1 MIR4422-201ENST00000581938 83 ntBASIC0.96□□□□□ -2.26
COMMD3Q9UBI1 AL158827.2-201ENST00000602494 330 ntBASIC0.96□□□□□ -2.26
COMMD3Q9UBI1 AC133794.1-201ENST00000602731 914 ntBASIC0.96□□□□□ -2.26
COMMD3Q9UBI1 AC116312.1-201ENST00000606841 314 ntBASIC0.96□□□□□ -2.26
COMMD3Q9UBI1 AC092953.2-201ENST00000608000 699 ntBASIC0.96□□□□□ -2.26
COMMD3Q9UBI1 AF129408.1-201ENST00000608767 431 ntBASIC0.96□□□□□ -2.26
COMMD3Q9UBI1 AP005229.2-201ENST00000609980 697 ntBASIC0.96□□□□□ -2.26
COMMD3Q9UBI1 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC0.96□□□□□ -2.26
COMMD3Q9UBI1 DUSP12P1-201ENST00000612874 516 ntBASIC0.96□□□□□ -2.26
COMMD3Q9UBI1 AL603758.1-201ENST00000618654 241 ntBASIC0.96□□□□□ -2.26
COMMD3Q9UBI1 AC006213.5-201ENST00000619673 288 ntBASIC0.96□□□□□ -2.26
COMMD3Q9UBI1 AL691447.3-201ENST00000635020 330 ntBASIC0.96□□□□□ -2.26
COMMD3Q9UBI1 AC087821.2-201ENST00000637086 450 ntBASIC0.96□□□□□ -2.26
COMMD3Q9UBI1 ZNF680P1-201ENST00000436625 1469 ntBASIC0.96□□□□□ -2.26
COMMD3Q9UBI1 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms