Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 Y_RNA.367-201ENST00000365544 101 ntBASIC2.96□□□□□ -1.94
CPSF2Q9P2I0 RNU1-138P-201ENST00000384093 164 ntBASIC2.96□□□□□ -1.94
CPSF2Q9P2I0 MIR449B-201ENST00000384995 97 ntBASIC2.96□□□□□ -1.94
CPSF2Q9P2I0 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CPSF2Q9P2I0 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.96□□□□□ -1.94
CPSF2Q9P2I0 MTCO2P34-201ENST00000421994 607 ntBASIC2.96□□□□□ -1.94
CPSF2Q9P2I0 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.96□□□□□ -1.94
CPSF2Q9P2I0 AC005326.1-201ENST00000429197 123 ntBASIC2.96□□□□□ -1.94
CPSF2Q9P2I0 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.96□□□□□ -1.94
CPSF2Q9P2I0 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.96□□□□□ -1.94
CPSF2Q9P2I0 RPS20P5-201ENST00000434808 360 ntBASIC2.96□□□□□ -1.94
CPSF2Q9P2I0 HMGN2P10-201ENST00000448085 265 ntBASIC2.96□□□□□ -1.94
CPSF2Q9P2I0 AC107626.1-201ENST00000471084 183 ntBASIC2.96□□□□□ -1.94
CPSF2Q9P2I0 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.96□□□□□ -1.94
CPSF2Q9P2I0 RNU6-1183P-201ENST00000517054 60 ntBASIC2.96□□□□□ -1.94
CPSF2Q9P2I0 RNU6-430P-201ENST00000517078 107 ntBASIC2.96□□□□□ -1.94
CPSF2Q9P2I0 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.96□□□□□ -1.94
CPSF2Q9P2I0 AC025755.1-201ENST00000521306 278 ntBASIC2.96□□□□□ -1.94
CPSF2Q9P2I0 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.96□□□□□ -1.94
CPSF2Q9P2I0 AP002404.1-201ENST00000532005 451 ntBASIC2.96□□□□□ -1.94
CPSF2Q9P2I0 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.96□□□□□ -1.94
CPSF2Q9P2I0 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.96□□□□□ -1.94
CPSF2Q9P2I0 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.96□□□□□ -1.94
CPSF2Q9P2I0 ADI1P3-201ENST00000549509 470 ntBASIC2.96□□□□□ -1.94
CPSF2Q9P2I0 MIR5680-201ENST00000577577 84 ntBASIC2.96□□□□□ -1.94
CPSF2Q9P2I0 MIR4528-201ENST00000577763 90 ntBASIC2.96□□□□□ -1.94
CPSF2Q9P2I0 AC098848.2-201ENST00000588023 330 ntBASIC2.96□□□□□ -1.94
CPSF2Q9P2I0 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.96□□□□□ -1.94
CPSF2Q9P2I0 AC008739.3-201ENST00000603262 127 ntBASIC2.96□□□□□ -1.94
CPSF2Q9P2I0 AL158032.1-201ENST00000605401 106 ntBASIC2.96□□□□□ -1.94
CPSF2Q9P2I0 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.96□□□□□ -1.94
CPSF2Q9P2I0 MIR7975-201ENST00000619350 68 ntBASIC2.96□□□□□ -1.94
CPSF2Q9P2I0 AC138649.3-201ENST00000622154 254 ntBASIC2.96□□□□□ -1.94
CPSF2Q9P2I0 AC093648.1-201ENST00000623546 606 ntBASIC2.96□□□□□ -1.94
CPSF2Q9P2I0 U6.99-201ENST00000637524 83 ntBASIC2.96□□□□□ -1.94
CPSF2Q9P2I0 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.96□□□□□ -1.94
CPSF2Q9P2I0 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CPSF2Q9P2I0 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.96□□□□□ -1.94
CPSF2Q9P2I0 AC135776.4-201ENST00000624300 1904 ntBASIC2.95□□□□□ -1.94
CPSF2Q9P2I0 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
CPSF2Q9P2I0 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
CPSF2Q9P2I0 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.95□□□□□ -1.94
CPSF2Q9P2I0 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CPSF2Q9P2I0 RNU6-179P-201ENST00000363350 107 ntBASIC2.95□□□□□ -1.94
CPSF2Q9P2I0 RNU6-282P-201ENST00000365357 103 ntBASIC2.95□□□□□ -1.94
CPSF2Q9P2I0 SNORA75B-201ENST00000384053 137 ntBASIC2.95□□□□□ -1.94
CPSF2Q9P2I0 U3.19-201ENST00000390893 196 ntBASIC2.95□□□□□ -1.94
CPSF2Q9P2I0 CISD1P1-201ENST00000393907 327 ntBASIC2.95□□□□□ -1.94
CPSF2Q9P2I0 RNU6-1025P-201ENST00000410629 104 ntBASIC2.95□□□□□ -1.94
CPSF2Q9P2I0 RNU4-47P-201ENST00000410876 114 ntBASIC2.95□□□□□ -1.94
CPSF2Q9P2I0 OR51A5P-201ENST00000415429 942 ntBASIC2.95□□□□□ -1.94
CPSF2Q9P2I0 AC096649.2-201ENST00000416186 393 ntBASIC2.95□□□□□ -1.94
CPSF2Q9P2I0 AC133104.1-201ENST00000429100 218 ntBASIC2.95□□□□□ -1.94
CPSF2Q9P2I0 MYL8P-204ENST00000431574 518 ntBASIC2.95□□□□□ -1.94
CPSF2Q9P2I0 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.95□□□□□ -1.94
CPSF2Q9P2I0 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.95□□□□□ -1.94
CPSF2Q9P2I0 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.95□□□□□ -1.94
CPSF2Q9P2I0 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.95□□□□□ -1.94
CPSF2Q9P2I0 AC126389.1-201ENST00000477436 290 ntBASIC2.95□□□□□ -1.94
CPSF2Q9P2I0 AC116562.3-201ENST00000506136 177 ntBASIC2.95□□□□□ -1.94
CPSF2Q9P2I0 AC008716.1-201ENST00000511084 513 ntBASIC2.95□□□□□ -1.94
CPSF2Q9P2I0 TBCAP3-201ENST00000512475 312 ntBASIC2.95□□□□□ -1.94
CPSF2Q9P2I0 RNU6-572P-201ENST00000516724 80 ntBASIC2.95□□□□□ -1.94
CPSF2Q9P2I0 RN7SKP272-201ENST00000516988 232 ntBASIC2.95□□□□□ -1.94
CPSF2Q9P2I0 SNORA31.19-201ENST00000517079 126 ntBASIC2.95□□□□□ -1.94
CPSF2Q9P2I0 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.95□□□□□ -1.94
CPSF2Q9P2I0 MTCYBP20-201ENST00000524239 1129 ntBASIC2.95□□□□□ -1.94
CPSF2Q9P2I0 AC068587.5-201ENST00000528506 175 ntBASIC2.95□□□□□ -1.94
CPSF2Q9P2I0 AC107016.2-201ENST00000547968 190 ntBASIC2.95□□□□□ -1.94
CPSF2Q9P2I0 AC006199.1-201ENST00000548728 219 ntBASIC2.95□□□□□ -1.94
CPSF2Q9P2I0 AC021739.1-201ENST00000559631 174 ntBASIC2.95□□□□□ -1.94
CPSF2Q9P2I0 MIR1273C-201ENST00000578669 77 ntBASIC2.95□□□□□ -1.94
CPSF2Q9P2I0 AL451007.1-201ENST00000595491 289 ntBASIC2.95□□□□□ -1.94
CPSF2Q9P2I0 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.95□□□□□ -1.94
CPSF2Q9P2I0 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.95□□□□□ -1.94
CPSF2Q9P2I0 AC009509.4-201ENST00000619202 509 ntBASIC2.95□□□□□ -1.94
CPSF2Q9P2I0 AC099842.1-201ENST00000619919 596 ntBASIC2.95□□□□□ -1.94
CPSF2Q9P2I0 AC025034.2-201ENST00000623264 286 ntBASIC2.95□□□□□ -1.94
CPSF2Q9P2I0 AC026422.1-201ENST00000623961 452 ntBASIC2.95□□□□□ -1.94
CPSF2Q9P2I0 AL157786.1-207ENST00000627771 695 ntBASIC2.95□□□□□ -1.94
CPSF2Q9P2I0 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.95□□□□□ -1.94
CPSF2Q9P2I0 MIR3199-2-201ENST00000636243 86 ntBASIC2.95□□□□□ -1.94
CPSF2Q9P2I0 MIR622-201ENST00000638396 96 ntBASIC2.95□□□□□ -1.94
CPSF2Q9P2I0 AC010889.1-201ENST00000566193 2666 ntBASIC2.95□□□□□ -1.94
CPSF2Q9P2I0 ADAM3A-203ENST00000461344 2157 ntBASIC2.94□□□□□ -1.94
CPSF2Q9P2I0 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CPSF2Q9P2I0 MIR22-201ENST00000362190 85 ntBASIC2.94□□□□□ -1.94
CPSF2Q9P2I0 Y_RNA.33-201ENST00000362591 102 ntBASIC2.94□□□□□ -1.94
CPSF2Q9P2I0 RNU6-108P-201ENST00000365558 107 ntBASIC2.94□□□□□ -1.94
CPSF2Q9P2I0 Z98749.2-208ENST00000381646 500 ntBASIC2.94□□□□□ -1.94
CPSF2Q9P2I0 SUMO1P4-201ENST00000429430 302 ntBASIC2.94□□□□□ -1.94
CPSF2Q9P2I0 RPS15AP7-201ENST00000439294 405 ntBASIC2.94□□□□□ -1.94
CPSF2Q9P2I0 AC079781.2-201ENST00000446424 169 ntBASIC2.94□□□□□ -1.94
CPSF2Q9P2I0 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.94□□□□□ -1.94
CPSF2Q9P2I0 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.94□□□□□ -1.94
CPSF2Q9P2I0 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC2.94□□□□□ -1.94
CPSF2Q9P2I0 TRBV1-201ENST00000476502 284 ntBASIC2.94□□□□□ -1.94
CPSF2Q9P2I0 RPS29P2-201ENST00000479278 136 ntBASIC2.94□□□□□ -1.94
CPSF2Q9P2I0 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CPSF2Q9P2I0 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms