Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 AL731566.2-201ENST00000618971 317 ntBASIC4.81□□□□□ -1.64
CNTN3Q9P232 AL360181.4-201ENST00000621752 134 ntBASIC4.81□□□□□ -1.64
CNTN3Q9P232 AC011944.2-201ENST00000624440 683 ntBASIC4.81□□□□□ -1.64
CNTN3Q9P232 AC112200.1-201ENST00000625015 234 ntBASIC4.81□□□□□ -1.64
CNTN3Q9P232 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CNTN3Q9P232 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
CNTN3Q9P232 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CNTN3Q9P232 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.8□□□□□ -1.64
CNTN3Q9P232 SNORD50.1-201ENST00000362987 71 ntBASIC4.8□□□□□ -1.64
CNTN3Q9P232 Y_RNA.84-201ENST00000363011 104 ntBASIC4.8□□□□□ -1.64
CNTN3Q9P232 RN7SKP227-201ENST00000364445 330 ntBASIC4.8□□□□□ -1.64
CNTN3Q9P232 Y_RNA.245-201ENST00000364493 95 ntBASIC4.8□□□□□ -1.64
CNTN3Q9P232 RNU6-629P-201ENST00000384061 103 ntBASIC4.8□□□□□ -1.64
CNTN3Q9P232 MIR34A-201ENST00000385130 110 ntBASIC4.8□□□□□ -1.64
CNTN3Q9P232 MIR3065-201ENST00000390137 79 ntBASIC4.8□□□□□ -1.64
CNTN3Q9P232 MIR1290-201ENST00000408735 78 ntBASIC4.8□□□□□ -1.64
CNTN3Q9P232 RNU6-121P-201ENST00000410525 99 ntBASIC4.8□□□□□ -1.64
CNTN3Q9P232 RNU6-130P-201ENST00000411112 103 ntBASIC4.8□□□□□ -1.64
CNTN3Q9P232 RPL21P38-201ENST00000418090 167 ntBASIC4.8□□□□□ -1.64
CNTN3Q9P232 AC091390.3-201ENST00000426478 338 ntBASIC4.8□□□□□ -1.64
CNTN3Q9P232 AC079780.1-201ENST00000428259 207 ntBASIC4.8□□□□□ -1.64
CNTN3Q9P232 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.8□□□□□ -1.64
CNTN3Q9P232 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.8□□□□□ -1.64
CNTN3Q9P232 PHBP16-201ENST00000446318 950 ntBASIC4.8□□□□□ -1.64
CNTN3Q9P232 AC013470.1-201ENST00000453438 462 ntBASIC4.8□□□□□ -1.64
CNTN3Q9P232 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.8□□□□□ -1.64
CNTN3Q9P232 RN7SL385P-201ENST00000468873 276 ntBASIC4.8□□□□□ -1.64
CNTN3Q9P232 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.8□□□□□ -1.64
CNTN3Q9P232 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
CNTN3Q9P232 AL359273.1-201ENST00000510918 627 ntBASIC4.8□□□□□ -1.64
CNTN3Q9P232 AC067942.3-201ENST00000512025 362 ntBASIC4.8□□□□□ -1.64
CNTN3Q9P232 RN7SKP122-201ENST00000515923 296 ntBASIC4.8□□□□□ -1.64
CNTN3Q9P232 RNA5SP497-201ENST00000516081 97 ntBASIC4.8□□□□□ -1.64
CNTN3Q9P232 RNU6-612P-201ENST00000516909 102 ntBASIC4.8□□□□□ -1.64
CNTN3Q9P232 MIR2355-201ENST00000517199 87 ntBASIC4.8□□□□□ -1.64
CNTN3Q9P232 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.8□□□□□ -1.64
CNTN3Q9P232 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.8□□□□□ -1.64
CNTN3Q9P232 AL139395.1-201ENST00000603662 160 ntBASIC4.8□□□□□ -1.64
CNTN3Q9P232 AC079587.1-201ENST00000603846 277 ntBASIC4.8□□□□□ -1.64
CNTN3Q9P232 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.8□□□□□ -1.64
CNTN3Q9P232 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
CNTN3Q9P232 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.8□□□□□ -1.64
CNTN3Q9P232 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.8□□□□□ -1.64
CNTN3Q9P232 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CNTN3Q9P232 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.8□□□□□ -1.64
CNTN3Q9P232 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CNTN3Q9P232 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.8□□□□□ -1.64
CNTN3Q9P232 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CNTN3Q9P232 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.79□□□□□ -1.64
CNTN3Q9P232 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CNTN3Q9P232 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
CNTN3Q9P232 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CNTN3Q9P232 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.79□□□□□ -1.64
CNTN3Q9P232 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.79□□□□□ -1.64
CNTN3Q9P232 Y_RNA.105-201ENST00000363182 111 ntBASIC4.79□□□□□ -1.64
CNTN3Q9P232 RNU1-20P-201ENST00000363314 162 ntBASIC4.79□□□□□ -1.64
CNTN3Q9P232 RNU1-63P-201ENST00000383902 164 ntBASIC4.79□□□□□ -1.64
CNTN3Q9P232 Y_RNA.458-201ENST00000384240 102 ntBASIC4.79□□□□□ -1.64
CNTN3Q9P232 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CNTN3Q9P232 PIGPP3-201ENST00000425307 415 ntBASIC4.79□□□□□ -1.64
CNTN3Q9P232 AL358472.1-201ENST00000431295 329 ntBASIC4.79□□□□□ -1.64
CNTN3Q9P232 AC091390.1-201ENST00000433904 331 ntBASIC4.79□□□□□ -1.64
CNTN3Q9P232 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CNTN3Q9P232 RN7SL303P-201ENST00000469773 251 ntBASIC4.79□□□□□ -1.64
CNTN3Q9P232 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.79□□□□□ -1.64
CNTN3Q9P232 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC4.79□□□□□ -1.64
CNTN3Q9P232 AK3P2-201ENST00000507976 429 ntBASIC4.79□□□□□ -1.64
CNTN3Q9P232 AC005921.1-201ENST00000510589 286 ntBASIC4.79□□□□□ -1.64
CNTN3Q9P232 RNU5B-3P-201ENST00000516601 115 ntBASIC4.79□□□□□ -1.64
CNTN3Q9P232 IGKV2-23-201ENST00000518729 323 ntBASIC4.79□□□□□ -1.64
CNTN3Q9P232 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC4.79□□□□□ -1.64
CNTN3Q9P232 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.79□□□□□ -1.64
CNTN3Q9P232 AL442163.3-201ENST00000554110 156 ntBASIC4.79□□□□□ -1.64
CNTN3Q9P232 AC103996.1-201ENST00000555468 102 ntBASIC4.79□□□□□ -1.64
CNTN3Q9P232 SRGNP1-201ENST00000603392 451 ntBASIC4.79□□□□□ -1.64
CNTN3Q9P232 AC113403.1-201ENST00000604910 193 ntBASIC4.79□□□□□ -1.64
CNTN3Q9P232 AL161629.2-201ENST00000615347 275 ntBASIC4.79□□□□□ -1.64
CNTN3Q9P232 AP001282.2-201ENST00000616149 309 ntBASIC4.79□□□□□ -1.64
CNTN3Q9P232 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.79□□□□□ -1.64
CNTN3Q9P232 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC4.79□□□□□ -1.64
CNTN3Q9P232 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.79□□□□□ -1.64
CNTN3Q9P232 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.79□□□□□ -1.64
CNTN3Q9P232 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.79□□□□□ -1.64
CNTN3Q9P232 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.79□□□□□ -1.64
CNTN3Q9P232 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
CNTN3Q9P232 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.79□□□□□ -1.64
CNTN3Q9P232 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CNTN3Q9P232 AL133412.1-201ENST00000380194 2992 ntBASIC4.78□□□□□ -1.64
CNTN3Q9P232 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.78□□□□□ -1.64
CNTN3Q9P232 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CNTN3Q9P232 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CNTN3Q9P232 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CNTN3Q9P232 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.78□□□□□ -1.64
CNTN3Q9P232 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
CNTN3Q9P232 AL391987.6-201ENST00000305671 199 ntBASIC4.78□□□□□ -1.64
CNTN3Q9P232 SNORD27-201ENST00000363981 72 ntBASIC4.78□□□□□ -1.64
CNTN3Q9P232 SNORA70.2-201ENST00000364506 135 ntBASIC4.78□□□□□ -1.64
CNTN3Q9P232 Y_RNA.352-201ENST00000365439 102 ntBASIC4.78□□□□□ -1.64
CNTN3Q9P232 MIR190B-201ENST00000401119 79 ntBASIC4.78□□□□□ -1.64
CNTN3Q9P232 MORN2-203ENST00000409131 544 ntTSL 5 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 162.9 ms