Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC3.19□□□□□ -1.9
HCN3Q9P1Z3 MIR548AC-201ENST00000585049 88 ntBASIC3.19□□□□□ -1.9
HCN3Q9P1Z3 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.19□□□□□ -1.9
HCN3Q9P1Z3 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.19□□□□□ -1.9
HCN3Q9P1Z3 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
HCN3Q9P1Z3 ELF2P3-201ENST00000445099 1506 ntBASIC3.19□□□□□ -1.9
HCN3Q9P1Z3 AL049781.1-201ENST00000623195 3585 ntBASIC3.18□□□□□ -1.9
HCN3Q9P1Z3 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
HCN3Q9P1Z3 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.18□□□□□ -1.9
HCN3Q9P1Z3 MTND5P7-201ENST00000413558 1798 ntBASIC3.18□□□□□ -1.9
HCN3Q9P1Z3 RNU6-1090P-201ENST00000364065 94 ntBASIC3.18□□□□□ -1.9
HCN3Q9P1Z3 RNU6-395P-201ENST00000365662 106 ntBASIC3.18□□□□□ -1.9
HCN3Q9P1Z3 RNU6-903P-201ENST00000391270 109 ntBASIC3.18□□□□□ -1.9
HCN3Q9P1Z3 AC126124.2-201ENST00000413542 321 ntBASIC3.18□□□□□ -1.9
HCN3Q9P1Z3 RPL21P90-201ENST00000415692 466 ntBASIC3.18□□□□□ -1.9
HCN3Q9P1Z3 USP9YP27-201ENST00000418455 438 ntBASIC3.18□□□□□ -1.9
HCN3Q9P1Z3 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.18□□□□□ -1.9
HCN3Q9P1Z3 HSPE1P1-201ENST00000421494 318 ntBASIC3.18□□□□□ -1.9
HCN3Q9P1Z3 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.18□□□□□ -1.9
HCN3Q9P1Z3 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.18□□□□□ -1.9
HCN3Q9P1Z3 SKA2P1-201ENST00000425592 390 ntBASIC3.18□□□□□ -1.9
HCN3Q9P1Z3 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.18□□□□□ -1.9
HCN3Q9P1Z3 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.18□□□□□ -1.9
HCN3Q9P1Z3 AC000111.3-201ENST00000433478 193 ntBASIC3.18□□□□□ -1.9
HCN3Q9P1Z3 BX679664.1-201ENST00000434429 253 ntBASIC3.18□□□□□ -1.9
HCN3Q9P1Z3 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC3.18□□□□□ -1.9
HCN3Q9P1Z3 AL714022.1-201ENST00000439897 151 ntBASIC3.18□□□□□ -1.9
HCN3Q9P1Z3 CYCSP32-201ENST00000440548 321 ntBASIC3.18□□□□□ -1.9
HCN3Q9P1Z3 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.18□□□□□ -1.9
HCN3Q9P1Z3 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.18□□□□□ -1.9
HCN3Q9P1Z3 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.18□□□□□ -1.9
HCN3Q9P1Z3 AC073415.1-201ENST00000449240 153 ntBASIC3.18□□□□□ -1.9
HCN3Q9P1Z3 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.18□□□□□ -1.9
HCN3Q9P1Z3 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.18□□□□□ -1.9
HCN3Q9P1Z3 RNU6-261P-201ENST00000459506 102 ntBASIC3.18□□□□□ -1.9
HCN3Q9P1Z3 RPL21P41-201ENST00000459863 264 ntBASIC3.18□□□□□ -1.9
HCN3Q9P1Z3 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.18□□□□□ -1.9
HCN3Q9P1Z3 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.18□□□□□ -1.9
HCN3Q9P1Z3 RNA5SP401-201ENST00000515920 127 ntBASIC3.18□□□□□ -1.9
HCN3Q9P1Z3 SNORA74D-201ENST00000516404 141 ntBASIC3.18□□□□□ -1.9
HCN3Q9P1Z3 RNU6-1178P-201ENST00000516674 107 ntBASIC3.18□□□□□ -1.9
HCN3Q9P1Z3 RNU6-572P-201ENST00000516724 80 ntBASIC3.18□□□□□ -1.9
HCN3Q9P1Z3 AC107934.2-201ENST00000518653 310 ntBASIC3.18□□□□□ -1.9
HCN3Q9P1Z3 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.18□□□□□ -1.9
HCN3Q9P1Z3 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.18□□□□□ -1.9
HCN3Q9P1Z3 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
HCN3Q9P1Z3 AP005435.4-201ENST00000529514 284 ntBASIC3.18□□□□□ -1.9
HCN3Q9P1Z3 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
HCN3Q9P1Z3 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.18□□□□□ -1.9
HCN3Q9P1Z3 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.18□□□□□ -1.9
HCN3Q9P1Z3 AC005476.1-201ENST00000554427 397 ntBASIC3.18□□□□□ -1.9
HCN3Q9P1Z3 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC3.18□□□□□ -1.9
HCN3Q9P1Z3 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.18□□□□□ -1.9
HCN3Q9P1Z3 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.18□□□□□ -1.9
HCN3Q9P1Z3 AL355598.1-201ENST00000604169 202 ntBASIC3.18□□□□□ -1.9
HCN3Q9P1Z3 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.18□□□□□ -1.9
HCN3Q9P1Z3 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.18□□□□□ -1.9
HCN3Q9P1Z3 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
HCN3Q9P1Z3 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.18□□□□□ -1.9
HCN3Q9P1Z3 AC004972.1-201ENST00000623934 2209 ntBASIC3.17□□□□□ -1.9
HCN3Q9P1Z3 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
HCN3Q9P1Z3 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HCN3Q9P1Z3 NACAP2-201ENST00000318548 624 ntBASIC3.17□□□□□ -1.9
HCN3Q9P1Z3 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HCN3Q9P1Z3 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HCN3Q9P1Z3 RNU6-778P-201ENST00000363269 103 ntBASIC3.17□□□□□ -1.9
HCN3Q9P1Z3 CD24P4-201ENST00000382840 243 ntBASIC3.17□□□□□ -1.9
HCN3Q9P1Z3 RNU6-1179P-201ENST00000384667 107 ntBASIC3.17□□□□□ -1.9
HCN3Q9P1Z3 MIR491-201ENST00000384877 84 ntBASIC3.17□□□□□ -1.9
HCN3Q9P1Z3 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
HCN3Q9P1Z3 U3.19-201ENST00000390893 196 ntBASIC3.17□□□□□ -1.9
HCN3Q9P1Z3 SNORD115-47-201ENST00000391226 86 ntBASIC3.17□□□□□ -1.9
HCN3Q9P1Z3 EEF1A1P40-201ENST00000412883 573 ntBASIC3.17□□□□□ -1.9
HCN3Q9P1Z3 RPS3AP44-201ENST00000425466 790 ntBASIC3.17□□□□□ -1.9
HCN3Q9P1Z3 AC125238.1-201ENST00000448842 249 ntBASIC3.17□□□□□ -1.9
HCN3Q9P1Z3 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.17□□□□□ -1.9
HCN3Q9P1Z3 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.17□□□□□ -1.9
HCN3Q9P1Z3 SNORA31.19-201ENST00000517079 126 ntBASIC3.17□□□□□ -1.9
HCN3Q9P1Z3 SNORA31.21-201ENST00000517180 77 ntBASIC3.17□□□□□ -1.9
HCN3Q9P1Z3 AC009902.1-201ENST00000519351 183 ntBASIC3.17□□□□□ -1.9
HCN3Q9P1Z3 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.17□□□□□ -1.9
HCN3Q9P1Z3 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.17□□□□□ -1.9
HCN3Q9P1Z3 HIF1AP1-201ENST00000553642 175 ntBASIC3.17□□□□□ -1.9
HCN3Q9P1Z3 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.17□□□□□ -1.9
HCN3Q9P1Z3 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.17□□□□□ -1.9
HCN3Q9P1Z3 AC106782.4-201ENST00000568264 210 ntBASIC3.17□□□□□ -1.9
HCN3Q9P1Z3 MIR5692A1-201ENST00000580523 69 ntBASIC3.17□□□□□ -1.9
HCN3Q9P1Z3 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.17□□□□□ -1.9
HCN3Q9P1Z3 NUTF2P8-201ENST00000604593 363 ntBASIC3.17□□□□□ -1.9
HCN3Q9P1Z3 AC004852.3-201ENST00000614131 326 ntBASIC3.17□□□□□ -1.9
HCN3Q9P1Z3 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.17□□□□□ -1.9
HCN3Q9P1Z3 U6.42-201ENST00000618440 107 ntBASIC3.17□□□□□ -1.9
HCN3Q9P1Z3 AC026585.1-201ENST00000619582 524 ntBASIC3.17□□□□□ -1.9
HCN3Q9P1Z3 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.17□□□□□ -1.9
HCN3Q9P1Z3 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
HCN3Q9P1Z3 MTND5P27-201ENST00000428871 1720 ntBASIC3.16□□□□□ -1.9
HCN3Q9P1Z3 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HCN3Q9P1Z3 MTND5P1-201ENST00000445440 1375 ntBASIC3.16□□□□□ -1.9
HCN3Q9P1Z3 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HCN3Q9P1Z3 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 161.5 ms