Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 SNORD116-12-201ENST00000384468 92 ntBASIC1.77□□□□□ -2.13
VAPAQ9P0L0 Y_RNA.510-201ENST00000384511 114 ntBASIC1.77□□□□□ -2.13
VAPAQ9P0L0 MIR19A-201ENST00000384878 82 ntBASIC1.77□□□□□ -2.13
VAPAQ9P0L0 GSTA9P-201ENST00000406231 611 ntBASIC1.77□□□□□ -2.13
VAPAQ9P0L0 USP9YP6-201ENST00000413550 854 ntBASIC1.77□□□□□ -2.13
VAPAQ9P0L0 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.77□□□□□ -2.13
VAPAQ9P0L0 HMGB1P27-201ENST00000431429 603 ntBASIC1.77□□□□□ -2.13
VAPAQ9P0L0 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.77□□□□□ -2.13
VAPAQ9P0L0 AC009238.1-201ENST00000442165 424 ntBASIC1.77□□□□□ -2.13
VAPAQ9P0L0 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.77□□□□□ -2.13
VAPAQ9P0L0 AC009237.6-201ENST00000446969 424 ntBASIC1.77□□□□□ -2.13
VAPAQ9P0L0 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.77□□□□□ -2.13
VAPAQ9P0L0 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.77□□□□□ -2.13
VAPAQ9P0L0 AL441985.1-201ENST00000457727 251 ntBASIC1.77□□□□□ -2.13
VAPAQ9P0L0 RNU7-59P-201ENST00000459101 61 ntBASIC1.77□□□□□ -2.13
VAPAQ9P0L0 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC1.77□□□□□ -2.13
VAPAQ9P0L0 AC011005.2-201ENST00000487324 359 ntBASIC1.77□□□□□ -2.13
VAPAQ9P0L0 AC108729.1-201ENST00000487812 947 ntBASIC1.77□□□□□ -2.13
VAPAQ9P0L0 AC140059.1-201ENST00000489238 361 ntBASIC1.77□□□□□ -2.13
VAPAQ9P0L0 AC106872.3-201ENST00000495104 446 ntBASIC1.77□□□□□ -2.13
VAPAQ9P0L0 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.77□□□□□ -2.13
VAPAQ9P0L0 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.77□□□□□ -2.13
VAPAQ9P0L0 SNORA19.3-201ENST00000516165 130 ntBASIC1.77□□□□□ -2.13
VAPAQ9P0L0 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.77□□□□□ -2.13
VAPAQ9P0L0 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC1.77□□□□□ -2.13
VAPAQ9P0L0 AC012213.3-201ENST00000577199 777 ntBASIC1.77□□□□□ -2.13
VAPAQ9P0L0 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.77□□□□□ -2.13
VAPAQ9P0L0 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.77□□□□□ -2.13
VAPAQ9P0L0 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.77□□□□□ -2.13
VAPAQ9P0L0 BNIP3P23-201ENST00000599655 511 ntBASIC1.77□□□□□ -2.13
VAPAQ9P0L0 AC245297.2-201ENST00000610119 565 ntBASIC1.77□□□□□ -2.13
VAPAQ9P0L0 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.77□□□□□ -2.13
VAPAQ9P0L0 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC1.77□□□□□ -2.13
VAPAQ9P0L0 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.77□□□□□ -2.13
VAPAQ9P0L0 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.77□□□□□ -2.13
VAPAQ9P0L0 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.76□□□□□ -2.13
VAPAQ9P0L0 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
VAPAQ9P0L0 SNORA16.1-201ENST00000364597 132 ntBASIC1.76□□□□□ -2.13
VAPAQ9P0L0 RNU6-621P-201ENST00000364752 109 ntBASIC1.76□□□□□ -2.13
VAPAQ9P0L0 RNU6-748P-201ENST00000384648 107 ntBASIC1.76□□□□□ -2.13
VAPAQ9P0L0 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.76□□□□□ -2.13
VAPAQ9P0L0 AL359704.1-201ENST00000411586 781 ntBASIC1.76□□□□□ -2.13
VAPAQ9P0L0 Z98742.3-201ENST00000418637 326 ntBASIC1.76□□□□□ -2.13
VAPAQ9P0L0 RPS25P9-201ENST00000435591 252 ntBASIC1.76□□□□□ -2.13
VAPAQ9P0L0 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
VAPAQ9P0L0 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.76□□□□□ -2.13
VAPAQ9P0L0 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.76□□□□□ -2.13
VAPAQ9P0L0 HMGB3P17-201ENST00000504195 649 ntBASIC1.76□□□□□ -2.13
VAPAQ9P0L0 MRPS17P9-201ENST00000511924 393 ntBASIC1.76□□□□□ -2.13
VAPAQ9P0L0 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.76□□□□□ -2.13
VAPAQ9P0L0 RNU6-1183P-201ENST00000517054 60 ntBASIC1.76□□□□□ -2.13
VAPAQ9P0L0 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.76□□□□□ -2.13
VAPAQ9P0L0 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.76□□□□□ -2.13
VAPAQ9P0L0 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.76□□□□□ -2.13
VAPAQ9P0L0 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.76□□□□□ -2.13
VAPAQ9P0L0 AC012435.1-202ENST00000568772 240 ntBASIC1.76□□□□□ -2.13
VAPAQ9P0L0 AC022662.1-201ENST00000580252 331 ntBASIC1.76□□□□□ -2.13
VAPAQ9P0L0 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.76□□□□□ -2.13
VAPAQ9P0L0 AC078899.2-201ENST00000595282 212 ntBASIC1.76□□□□□ -2.13
VAPAQ9P0L0 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.76□□□□□ -2.13
VAPAQ9P0L0 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.76□□□□□ -2.13
VAPAQ9P0L0 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
VAPAQ9P0L0 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
VAPAQ9P0L0 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
VAPAQ9P0L0 PAPPA-AS1-201ENST00000445861 2450 ntBASIC1.76□□□□□ -2.13
VAPAQ9P0L0 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
VAPAQ9P0L0 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
VAPAQ9P0L0 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
VAPAQ9P0L0 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.75□□□□□ -2.13
VAPAQ9P0L0 RNU4-82P-201ENST00000362443 140 ntBASIC1.75□□□□□ -2.13
VAPAQ9P0L0 RNA5SP240-201ENST00000365355 128 ntBASIC1.75□□□□□ -2.13
VAPAQ9P0L0 RNU6-413P-201ENST00000384115 107 ntBASIC1.75□□□□□ -2.13
VAPAQ9P0L0 AL135786.1-201ENST00000415892 214 ntBASIC1.75□□□□□ -2.13
VAPAQ9P0L0 AL160275.3-201ENST00000423876 471 ntBASIC1.75□□□□□ -2.13
VAPAQ9P0L0 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.75□□□□□ -2.13
VAPAQ9P0L0 AL451074.3-201ENST00000437709 472 ntBASIC1.75□□□□□ -2.13
VAPAQ9P0L0 AC005094.1-201ENST00000440420 368 ntBASIC1.75□□□□□ -2.13
VAPAQ9P0L0 MTCO1P27-201ENST00000448269 226 ntBASIC1.75□□□□□ -2.13
VAPAQ9P0L0 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.75□□□□□ -2.13
VAPAQ9P0L0 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.75□□□□□ -2.13
VAPAQ9P0L0 AC112771.1-201ENST00000463581 102 ntBASIC1.75□□□□□ -2.13
VAPAQ9P0L0 AC007182.2-201ENST00000489251 402 ntBASIC1.75□□□□□ -2.13
VAPAQ9P0L0 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.75□□□□□ -2.13
VAPAQ9P0L0 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.75□□□□□ -2.13
VAPAQ9P0L0 AC109445.1-201ENST00000512356 383 ntBASIC1.75□□□□□ -2.13
VAPAQ9P0L0 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.75□□□□□ -2.13
VAPAQ9P0L0 SNORA4.4-201ENST00000515921 135 ntBASIC1.75□□□□□ -2.13
VAPAQ9P0L0 RNU6-276P-201ENST00000516114 96 ntBASIC1.75□□□□□ -2.13
VAPAQ9P0L0 RNU6-64P-201ENST00000517119 105 ntBASIC1.75□□□□□ -2.13
VAPAQ9P0L0 AC107953.1-201ENST00000522216 297 ntBASIC1.75□□□□□ -2.13
VAPAQ9P0L0 AC090897.2-201ENST00000581715 130 ntBASIC1.75□□□□□ -2.13
VAPAQ9P0L0 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC1.75□□□□□ -2.13
VAPAQ9P0L0 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC1.75□□□□□ -2.13
VAPAQ9P0L0 BNIP3P22-201ENST00000593399 556 ntBASIC1.75□□□□□ -2.13
VAPAQ9P0L0 AL109918.3-201ENST00000603072 338 ntBASIC1.75□□□□□ -2.13
VAPAQ9P0L0 AC104763.2-201ENST00000604179 382 ntBASIC1.75□□□□□ -2.13
VAPAQ9P0L0 AL136313.1-201ENST00000624804 202 ntBASIC1.75□□□□□ -2.13
VAPAQ9P0L0 ZNF702P-202ENST00000434269 1966 ntBASIC1.75□□□□□ -2.13
VAPAQ9P0L0 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
VAPAQ9P0L0 MTND5P33-201ENST00000571250 1450 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms