Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
MKS1Q9NXB0 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
MKS1Q9NXB0 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
MKS1Q9NXB0 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
MKS1Q9NXB0 AC103988.1-201ENST00000566382 2177 ntBASIC3.8□□□□□ -1.8
MKS1Q9NXB0 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
MKS1Q9NXB0 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
MKS1Q9NXB0 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
MKS1Q9NXB0 RNU4-73P-201ENST00000363164 141 ntBASIC3.8□□□□□ -1.8
MKS1Q9NXB0 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
MKS1Q9NXB0 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.8□□□□□ -1.8
MKS1Q9NXB0 RNU1-73P-201ENST00000383971 164 ntBASIC3.8□□□□□ -1.8
MKS1Q9NXB0 MIR10A-201ENST00000385043 110 ntBASIC3.8□□□□□ -1.8
MKS1Q9NXB0 AL356057.2-201ENST00000403318 432 ntBASIC3.8□□□□□ -1.8
MKS1Q9NXB0 RAB28P1-201ENST00000411517 641 ntBASIC3.8□□□□□ -1.8
MKS1Q9NXB0 RPL17P36-201ENST00000420302 549 ntBASIC3.8□□□□□ -1.8
MKS1Q9NXB0 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.8□□□□□ -1.8
MKS1Q9NXB0 DNAJC19P7-201ENST00000428811 344 ntBASIC3.8□□□□□ -1.8
MKS1Q9NXB0 HMGB1P9-201ENST00000429856 646 ntBASIC3.8□□□□□ -1.8
MKS1Q9NXB0 RPL32P28-201ENST00000443577 397 ntBASIC3.8□□□□□ -1.8
MKS1Q9NXB0 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.8□□□□□ -1.8
MKS1Q9NXB0 RNU7-138P-201ENST00000459479 64 ntBASIC3.8□□□□□ -1.8
MKS1Q9NXB0 RPS23P7-201ENST00000466210 444 ntBASIC3.8□□□□□ -1.8
MKS1Q9NXB0 RAC1P2-201ENST00000511164 579 ntBASIC3.8□□□□□ -1.8
MKS1Q9NXB0 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.8□□□□□ -1.8
MKS1Q9NXB0 Y_RNA.682-201ENST00000516457 100 ntBASIC3.8□□□□□ -1.8
MKS1Q9NXB0 RNU6-1332P-201ENST00000516666 104 ntBASIC3.8□□□□□ -1.8
MKS1Q9NXB0 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.8□□□□□ -1.8
MKS1Q9NXB0 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.8□□□□□ -1.8
MKS1Q9NXB0 MIR4782-201ENST00000577987 79 ntBASIC3.8□□□□□ -1.8
MKS1Q9NXB0 RN7SL600P-201ENST00000581811 299 ntBASIC3.8□□□□□ -1.8
MKS1Q9NXB0 MIR5096-201ENST00000583713 70 ntBASIC3.8□□□□□ -1.8
MKS1Q9NXB0 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.8□□□□□ -1.8
MKS1Q9NXB0 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.8□□□□□ -1.8
MKS1Q9NXB0 KLKP1-201ENST00000595979 403 ntBASIC3.8□□□□□ -1.8
MKS1Q9NXB0 AL670379.10-201ENST00000604330 253 ntBASIC3.8□□□□□ -1.8
MKS1Q9NXB0 AC012468.1-201ENST00000604888 430 ntBASIC3.8□□□□□ -1.8
MKS1Q9NXB0 AL670379.9-201ENST00000605428 253 ntBASIC3.8□□□□□ -1.8
MKS1Q9NXB0 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.8□□□□□ -1.8
MKS1Q9NXB0 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.8□□□□□ -1.8
MKS1Q9NXB0 AC011944.2-201ENST00000624440 683 ntBASIC3.8□□□□□ -1.8
MKS1Q9NXB0 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
MKS1Q9NXB0 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.8□□□□□ -1.8
MKS1Q9NXB0 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
MKS1Q9NXB0 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.79□□□□□ -1.8
MKS1Q9NXB0 MTND4P29-201ENST00000503122 1372 ntBASIC3.79□□□□□ -1.8
MKS1Q9NXB0 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.79□□□□□ -1.8
MKS1Q9NXB0 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.79□□□□□ -1.8
MKS1Q9NXB0 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.79□□□□□ -1.8
MKS1Q9NXB0 AC058791.1-201ENST00000608412 3198 ntBASIC3.79□□□□□ -1.8
MKS1Q9NXB0 AC138393.1-203ENST00000327086 343 ntBASIC3.79□□□□□ -1.8
MKS1Q9NXB0 Y_RNA.135-201ENST00000363439 95 ntBASIC3.79□□□□□ -1.8
MKS1Q9NXB0 SNORD116-11-201ENST00000383882 92 ntBASIC3.79□□□□□ -1.8
MKS1Q9NXB0 RNU6-128P-201ENST00000383976 107 ntBASIC3.79□□□□□ -1.8
MKS1Q9NXB0 AL356967.1-201ENST00000406305 431 ntBASIC3.79□□□□□ -1.8
MKS1Q9NXB0 PGBD4P6-201ENST00000421501 610 ntBASIC3.79□□□□□ -1.8
MKS1Q9NXB0 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.79□□□□□ -1.8
MKS1Q9NXB0 AL353729.1-201ENST00000425044 720 ntBASIC3.79□□□□□ -1.8
MKS1Q9NXB0 RPL23AP82-202ENST00000427528 469 ntBASIC3.79□□□□□ -1.8
MKS1Q9NXB0 TBCAP1-201ENST00000436520 327 ntBASIC3.79□□□□□ -1.8
MKS1Q9NXB0 AL359672.1-201ENST00000442302 409 ntBASIC3.79□□□□□ -1.8
MKS1Q9NXB0 AC092001.1-201ENST00000453012 261 ntBASIC3.79□□□□□ -1.8
MKS1Q9NXB0 AC233279.1-201ENST00000455300 423 ntBASIC3.79□□□□□ -1.8
MKS1Q9NXB0 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.79□□□□□ -1.8
MKS1Q9NXB0 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.79□□□□□ -1.8
MKS1Q9NXB0 RNA5SP208-201ENST00000516156 78 ntBASIC3.79□□□□□ -1.8
MKS1Q9NXB0 RNA5SP454-201ENST00000517231 127 ntBASIC3.79□□□□□ -1.8
MKS1Q9NXB0 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.79□□□□□ -1.8
MKS1Q9NXB0 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.79□□□□□ -1.8
MKS1Q9NXB0 AC025423.5-201ENST00000550230 219 ntBASIC3.79□□□□□ -1.8
MKS1Q9NXB0 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.79□□□□□ -1.8
MKS1Q9NXB0 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.79□□□□□ -1.8
MKS1Q9NXB0 MIR4738-201ENST00000579134 87 ntBASIC3.79□□□□□ -1.8
MKS1Q9NXB0 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.79□□□□□ -1.8
MKS1Q9NXB0 RNU6-85P-201ENST00000605989 107 ntBASIC3.79□□□□□ -1.8
MKS1Q9NXB0 RNVU1-4-201ENST00000612985 164 ntBASIC3.79□□□□□ -1.8
MKS1Q9NXB0 AC114781.5-201ENST00000615297 108 ntBASIC3.79□□□□□ -1.8
MKS1Q9NXB0 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.79□□□□□ -1.8
MKS1Q9NXB0 AC073308.1-201ENST00000623696 305 ntBASIC3.79□□□□□ -1.8
MKS1Q9NXB0 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.79□□□□□ -1.8
MKS1Q9NXB0 SRP72P2-201ENST00000344851 1979 ntBASIC3.79□□□□□ -1.8
MKS1Q9NXB0 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
MKS1Q9NXB0 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
MKS1Q9NXB0 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
MKS1Q9NXB0 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
MKS1Q9NXB0 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
MKS1Q9NXB0 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
MKS1Q9NXB0 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
MKS1Q9NXB0 AC073544.1-201ENST00000600110 1595 ntBASIC3.78□□□□□ -1.8
MKS1Q9NXB0 FRG1CP-201ENST00000358464 769 ntBASIC3.78□□□□□ -1.8
MKS1Q9NXB0 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
MKS1Q9NXB0 RNU6-658P-201ENST00000384606 106 ntBASIC3.78□□□□□ -1.8
MKS1Q9NXB0 MIR34A-201ENST00000385130 110 ntBASIC3.78□□□□□ -1.8
MKS1Q9NXB0 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
MKS1Q9NXB0 RNA5SP38-201ENST00000410750 119 ntBASIC3.78□□□□□ -1.8
MKS1Q9NXB0 AL158071.1-201ENST00000430315 461 ntBASIC3.78□□□□□ -1.8
MKS1Q9NXB0 AC007389.2-201ENST00000434630 306 ntBASIC3.78□□□□□ -1.8
MKS1Q9NXB0 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.78□□□□□ -1.8
MKS1Q9NXB0 RPL37P4-201ENST00000448908 268 ntBASIC3.78□□□□□ -1.8
MKS1Q9NXB0 AC104472.2-201ENST00000469035 601 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms