Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AC009310.1-201ENST00000414414 451 ntBASIC4.41□□□□□ -1.7
PDLIM7Q9NR12 AL160275.3-201ENST00000423876 471 ntBASIC4.41□□□□□ -1.7
PDLIM7Q9NR12 RPL23AP50-201ENST00000434149 455 ntBASIC4.41□□□□□ -1.7
PDLIM7Q9NR12 CYCSP32-201ENST00000440548 321 ntBASIC4.41□□□□□ -1.7
PDLIM7Q9NR12 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC4.41□□□□□ -1.7
PDLIM7Q9NR12 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.41□□□□□ -1.7
PDLIM7Q9NR12 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.41□□□□□ -1.7
PDLIM7Q9NR12 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.41□□□□□ -1.7
PDLIM7Q9NR12 CECR9-201ENST00000453421 199 ntBASIC4.41□□□□□ -1.7
PDLIM7Q9NR12 U8.20-201ENST00000459445 131 ntBASIC4.41□□□□□ -1.7
PDLIM7Q9NR12 AC022795.1-201ENST00000473808 480 ntBASIC4.41□□□□□ -1.7
PDLIM7Q9NR12 MRPS35P2-201ENST00000508242 191 ntBASIC4.41□□□□□ -1.7
PDLIM7Q9NR12 AC005921.1-201ENST00000510589 286 ntBASIC4.41□□□□□ -1.7
PDLIM7Q9NR12 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PDLIM7Q9NR12 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PDLIM7Q9NR12 AC069240.1-201ENST00000548774 375 ntBASIC4.41□□□□□ -1.7
PDLIM7Q9NR12 OR4H12P-201ENST00000556269 907 ntBASIC4.41□□□□□ -1.7
PDLIM7Q9NR12 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC4.41□□□□□ -1.7
PDLIM7Q9NR12 MIR3922-201ENST00000585192 84 ntBASIC4.41□□□□□ -1.7
PDLIM7Q9NR12 AC092447.9-201ENST00000603395 144 ntBASIC4.41□□□□□ -1.7
PDLIM7Q9NR12 AC091167.4-201ENST00000605079 184 ntBASIC4.41□□□□□ -1.7
PDLIM7Q9NR12 AC005000.2-201ENST00000605468 310 ntBASIC4.41□□□□□ -1.7
PDLIM7Q9NR12 AC002044.1-201ENST00000606707 158 ntBASIC4.41□□□□□ -1.7
PDLIM7Q9NR12 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
PDLIM7Q9NR12 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
PDLIM7Q9NR12 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
PDLIM7Q9NR12 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.41□□□□□ -1.7
PDLIM7Q9NR12 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.41□□□□□ -1.7
PDLIM7Q9NR12 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.4□□□□□ -1.7
PDLIM7Q9NR12 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.4□□□□□ -1.7
PDLIM7Q9NR12 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PDLIM7Q9NR12 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
PDLIM7Q9NR12 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PDLIM7Q9NR12 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.4□□□□□ -1.7
PDLIM7Q9NR12 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PDLIM7Q9NR12 RNA5SP52-201ENST00000362448 134 ntBASIC4.4□□□□□ -1.71
PDLIM7Q9NR12 RNU6-1303P-201ENST00000364841 107 ntBASIC4.4□□□□□ -1.71
PDLIM7Q9NR12 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.4□□□□□ -1.71
PDLIM7Q9NR12 SNORA3C-201ENST00000408792 125 ntBASIC4.4□□□□□ -1.71
PDLIM7Q9NR12 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.4□□□□□ -1.71
PDLIM7Q9NR12 AC243428.1-201ENST00000421099 264 ntBASIC4.4□□□□□ -1.71
PDLIM7Q9NR12 EIF4EP1-201ENST00000422311 642 ntBASIC4.4□□□□□ -1.71
PDLIM7Q9NR12 PPP1R11P2-201ENST00000423543 382 ntBASIC4.4□□□□□ -1.71
PDLIM7Q9NR12 AL159987.2-201ENST00000432754 307 ntBASIC4.4□□□□□ -1.71
PDLIM7Q9NR12 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.4□□□□□ -1.71
PDLIM7Q9NR12 HSPD1P21-201ENST00000436541 245 ntBASIC4.4□□□□□ -1.71
PDLIM7Q9NR12 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC4.4□□□□□ -1.71
PDLIM7Q9NR12 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC4.4□□□□□ -1.71
PDLIM7Q9NR12 AC009901.1-201ENST00000506703 541 ntBASIC4.4□□□□□ -1.71
PDLIM7Q9NR12 AC116655.1-201ENST00000508324 901 ntBASIC4.4□□□□□ -1.71
PDLIM7Q9NR12 AC104619.4-201ENST00000510773 249 ntBASIC4.4□□□□□ -1.71
PDLIM7Q9NR12 AC092436.3-201ENST00000511788 257 ntBASIC4.4□□□□□ -1.71
PDLIM7Q9NR12 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.4□□□□□ -1.71
PDLIM7Q9NR12 RNA5SP179-201ENST00000517284 121 ntBASIC4.4□□□□□ -1.71
PDLIM7Q9NR12 AC087369.1-201ENST00000520775 996 ntBASIC4.4□□□□□ -1.71
PDLIM7Q9NR12 GNAI2P1-201ENST00000541815 315 ntBASIC4.4□□□□□ -1.71
PDLIM7Q9NR12 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC4.4□□□□□ -1.71
PDLIM7Q9NR12 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.4□□□□□ -1.71
PDLIM7Q9NR12 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC4.4□□□□□ -1.71
PDLIM7Q9NR12 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC4.4□□□□□ -1.71
PDLIM7Q9NR12 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.4□□□□□ -1.71
PDLIM7Q9NR12 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.4□□□□□ -1.71
PDLIM7Q9NR12 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.4□□□□□ -1.71
PDLIM7Q9NR12 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PDLIM7Q9NR12 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.4□□□□□ -1.71
PDLIM7Q9NR12 AC011266.1-201ENST00000624119 3569 ntBASIC4.4□□□□□ -1.71
PDLIM7Q9NR12 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.4□□□□□ -1.71
PDLIM7Q9NR12 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.4□□□□□ -1.71
PDLIM7Q9NR12 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PDLIM7Q9NR12 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PDLIM7Q9NR12 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PDLIM7Q9NR12 AC091812.1-201ENST00000432235 1948 ntBASIC4.39□□□□□ -1.71
PDLIM7Q9NR12 RNU6-450P-201ENST00000364654 107 ntBASIC4.39□□□□□ -1.71
PDLIM7Q9NR12 RNU6-99P-201ENST00000364721 107 ntBASIC4.39□□□□□ -1.71
PDLIM7Q9NR12 Y_RNA.485-201ENST00000384395 102 ntBASIC4.39□□□□□ -1.71
PDLIM7Q9NR12 SNORA3.3-201ENST00000408712 125 ntBASIC4.39□□□□□ -1.71
PDLIM7Q9NR12 RNU2-43P-201ENST00000410306 190 ntBASIC4.39□□□□□ -1.71
PDLIM7Q9NR12 RNU6-293P-201ENST00000411259 106 ntBASIC4.39□□□□□ -1.71
PDLIM7Q9NR12 AL035423.1-201ENST00000420331 213 ntBASIC4.39□□□□□ -1.71
PDLIM7Q9NR12 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4.39□□□□□ -1.71
PDLIM7Q9NR12 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC4.39□□□□□ -1.71
PDLIM7Q9NR12 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.39□□□□□ -1.71
PDLIM7Q9NR12 AC097713.2-201ENST00000430199 356 ntBASIC4.39□□□□□ -1.71
PDLIM7Q9NR12 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.39□□□□□ -1.71
PDLIM7Q9NR12 AC084198.1-201ENST00000477747 402 ntBASIC4.39□□□□□ -1.71
PDLIM7Q9NR12 AC092451.1-201ENST00000480211 153 ntBASIC4.39□□□□□ -1.71
PDLIM7Q9NR12 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.39□□□□□ -1.71
PDLIM7Q9NR12 SCARNA14-201ENST00000516903 136 ntBASIC4.39□□□□□ -1.71
PDLIM7Q9NR12 AC009812.2-201ENST00000517657 457 ntBASIC4.39□□□□□ -1.71
PDLIM7Q9NR12 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.39□□□□□ -1.71
PDLIM7Q9NR12 AC126177.3-201ENST00000551839 688 ntBASIC4.39□□□□□ -1.71
PDLIM7Q9NR12 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.39□□□□□ -1.71
PDLIM7Q9NR12 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.39□□□□□ -1.71
PDLIM7Q9NR12 AL773545.4-201ENST00000637262 310 ntBASIC4.39□□□□□ -1.71
PDLIM7Q9NR12 AL513478.4-201ENST00000641636 310 ntBASIC4.39□□□□□ -1.71
PDLIM7Q9NR12 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PDLIM7Q9NR12 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
PDLIM7Q9NR12 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
PDLIM7Q9NR12 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PDLIM7Q9NR12 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms