Protein–RNA interactions for Protein: Q9NPJ1

MKKS, McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin, humanhuman

Predicted RBP Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKKSQ9NPJ1 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.12□□□□□ -1.91
MKKSQ9NPJ1 USP9YP6-201ENST00000413550 854 ntBASIC3.12□□□□□ -1.91
MKKSQ9NPJ1 AL356968.1-201ENST00000416622 474 ntBASIC3.12□□□□□ -1.91
MKKSQ9NPJ1 SNRPEP10-201ENST00000420249 274 ntBASIC3.12□□□□□ -1.91
MKKSQ9NPJ1 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.12□□□□□ -1.91
MKKSQ9NPJ1 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.12□□□□□ -1.91
MKKSQ9NPJ1 TRIAP1P1-201ENST00000427062 225 ntBASIC3.12□□□□□ -1.91
MKKSQ9NPJ1 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.12□□□□□ -1.91
MKKSQ9NPJ1 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.12□□□□□ -1.91
MKKSQ9NPJ1 BX510359.1-201ENST00000456973 237 ntBASIC3.12□□□□□ -1.91
MKKSQ9NPJ1 SNRPFP3-201ENST00000457792 225 ntBASIC3.12□□□□□ -1.91
MKKSQ9NPJ1 TRBV1-201ENST00000476502 284 ntBASIC3.12□□□□□ -1.91
MKKSQ9NPJ1 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.12□□□□□ -1.91
MKKSQ9NPJ1 RNU6-1282P-201ENST00000516735 96 ntBASIC3.12□□□□□ -1.91
MKKSQ9NPJ1 RNU6-914P-201ENST00000516749 109 ntBASIC3.12□□□□□ -1.91
MKKSQ9NPJ1 SNORA70.24-201ENST00000517233 118 ntBASIC3.12□□□□□ -1.91
MKKSQ9NPJ1 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.12□□□□□ -1.91
MKKSQ9NPJ1 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.12□□□□□ -1.91
MKKSQ9NPJ1 HIGD1AP1-201ENST00000550979 275 ntBASIC3.12□□□□□ -1.91
MKKSQ9NPJ1 AC005476.1-201ENST00000554427 397 ntBASIC3.12□□□□□ -1.91
MKKSQ9NPJ1 BNIP3P30-201ENST00000601184 574 ntBASIC3.12□□□□□ -1.91
MKKSQ9NPJ1 AL162713.1-201ENST00000604480 262 ntBASIC3.12□□□□□ -1.91
MKKSQ9NPJ1 MIR15A-201ENST00000607334 83 ntBASIC3.12□□□□□ -1.91
MKKSQ9NPJ1 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.12□□□□□ -1.91
MKKSQ9NPJ1 AL157817.1-201ENST00000614264 790 ntBASIC3.12□□□□□ -1.91
MKKSQ9NPJ1 AL138880.2-201ENST00000616214 239 ntBASIC3.12□□□□□ -1.91
MKKSQ9NPJ1 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.12□□□□□ -1.91
MKKSQ9NPJ1 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.12□□□□□ -1.91
MKKSQ9NPJ1 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.12□□□□□ -1.91
MKKSQ9NPJ1 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.12□□□□□ -1.91
MKKSQ9NPJ1 AC024940.5-201ENST00000622889 474 ntBASIC3.12□□□□□ -1.91
MKKSQ9NPJ1 AC027309.3-201ENST00000623419 351 ntBASIC3.12□□□□□ -1.91
MKKSQ9NPJ1 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.12□□□□□ -1.91
MKKSQ9NPJ1 MIR7153-201ENST00000637758 57 ntBASIC3.12□□□□□ -1.91
MKKSQ9NPJ1 FAM35BP-202ENST00000497389 3337 ntBASIC3.12□□□□□ -1.91
MKKSQ9NPJ1 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
MKKSQ9NPJ1 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
MKKSQ9NPJ1 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
MKKSQ9NPJ1 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
MKKSQ9NPJ1 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
MKKSQ9NPJ1 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
MKKSQ9NPJ1 NACAP2-201ENST00000318548 624 ntBASIC3.11□□□□□ -1.91
MKKSQ9NPJ1 RNU6-550P-201ENST00000391057 101 ntBASIC3.11□□□□□ -1.91
MKKSQ9NPJ1 UBE2V1P2-201ENST00000397758 440 ntBASIC3.11□□□□□ -1.91
MKKSQ9NPJ1 RPS4XP3-201ENST00000398541 413 ntBASIC3.11□□□□□ -1.91
MKKSQ9NPJ1 AL354719.1-201ENST00000406535 843 ntBASIC3.11□□□□□ -1.91
MKKSQ9NPJ1 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.11□□□□□ -1.91
MKKSQ9NPJ1 RPS15AP6-201ENST00000420703 385 ntBASIC3.11□□□□□ -1.91
MKKSQ9NPJ1 AL592045.1-201ENST00000429867 352 ntBASIC3.11□□□□□ -1.91
MKKSQ9NPJ1 GPM6BP2-201ENST00000432046 144 ntBASIC3.11□□□□□ -1.91
MKKSQ9NPJ1 BX679664.1-201ENST00000434429 253 ntBASIC3.11□□□□□ -1.91
MKKSQ9NPJ1 HIGD1AP11-201ENST00000438361 280 ntBASIC3.11□□□□□ -1.91
MKKSQ9NPJ1 CALM1P1-201ENST00000442082 433 ntBASIC3.11□□□□□ -1.91
MKKSQ9NPJ1 GPM6BP1-201ENST00000446387 144 ntBASIC3.11□□□□□ -1.91
MKKSQ9NPJ1 AL590664.1-201ENST00000448065 339 ntBASIC3.11□□□□□ -1.91
MKKSQ9NPJ1 NFU1P2-201ENST00000448700 469 ntBASIC3.11□□□□□ -1.91
MKKSQ9NPJ1 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.11□□□□□ -1.91
MKKSQ9NPJ1 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.11□□□□□ -1.91
MKKSQ9NPJ1 RPL31P58-201ENST00000469001 379 ntBASIC3.11□□□□□ -1.91
MKKSQ9NPJ1 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.11□□□□□ -1.91
MKKSQ9NPJ1 SNORA31.1-201ENST00000515993 133 ntBASIC3.11□□□□□ -1.91
MKKSQ9NPJ1 SNORA31.5-201ENST00000516190 133 ntBASIC3.11□□□□□ -1.91
MKKSQ9NPJ1 SNORD60.2-201ENST00000516883 86 ntBASIC3.11□□□□□ -1.91
MKKSQ9NPJ1 MIR2276-201ENST00000516886 89 ntBASIC3.11□□□□□ -1.91
MKKSQ9NPJ1 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.11□□□□□ -1.91
MKKSQ9NPJ1 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.11□□□□□ -1.91
MKKSQ9NPJ1 HIF1AP1-201ENST00000553642 175 ntBASIC3.11□□□□□ -1.91
MKKSQ9NPJ1 MIR5680-201ENST00000577577 84 ntBASIC3.11□□□□□ -1.91
MKKSQ9NPJ1 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.11□□□□□ -1.91
MKKSQ9NPJ1 Z99571.1-201ENST00000636677 394 ntBASIC3.11□□□□□ -1.91
MKKSQ9NPJ1 AC093010.3-201ENST00000570269 15214 ntBASIC3.11□□□□□ -1.91
MKKSQ9NPJ1 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
MKKSQ9NPJ1 SRP72P2-201ENST00000344851 1979 ntBASIC3.11□□□□□ -1.91
MKKSQ9NPJ1 AL354685.2-201ENST00000448218 1447 ntBASIC3.1□□□□□ -1.91
MKKSQ9NPJ1 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
MKKSQ9NPJ1 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
MKKSQ9NPJ1 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.1□□□□□ -1.91
MKKSQ9NPJ1 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
MKKSQ9NPJ1 Y_RNA.534-201ENST00000384599 112 ntBASIC3.1□□□□□ -1.91
MKKSQ9NPJ1 MIR301A-201ENST00000385261 86 ntBASIC3.1□□□□□ -1.91
MKKSQ9NPJ1 AL606923.1-201ENST00000406616 190 ntBASIC3.1□□□□□ -1.91
MKKSQ9NPJ1 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.1□□□□□ -1.91
MKKSQ9NPJ1 RNU4-47P-201ENST00000410876 114 ntBASIC3.1□□□□□ -1.91
MKKSQ9NPJ1 RNU6-1068P-201ENST00000410958 103 ntBASIC3.1□□□□□ -1.91
MKKSQ9NPJ1 AC092047.1-201ENST00000424997 240 ntBASIC3.1□□□□□ -1.91
MKKSQ9NPJ1 AL591704.1-201ENST00000432574 275 ntBASIC3.1□□□□□ -1.91
MKKSQ9NPJ1 RPL23AP83-201ENST00000434984 473 ntBASIC3.1□□□□□ -1.91
MKKSQ9NPJ1 RBMX2P4-201ENST00000441256 376 ntBASIC3.1□□□□□ -1.91
MKKSQ9NPJ1 RPS24P13-201ENST00000442520 397 ntBASIC3.1□□□□□ -1.91
MKKSQ9NPJ1 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.1□□□□□ -1.91
MKKSQ9NPJ1 AC104058.1-201ENST00000448028 297 ntBASIC3.1□□□□□ -1.91
MKKSQ9NPJ1 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.1□□□□□ -1.91
MKKSQ9NPJ1 HMGN1P18-201ENST00000457642 277 ntBASIC3.1□□□□□ -1.91
MKKSQ9NPJ1 AC021205.2-201ENST00000480069 347 ntBASIC3.1□□□□□ -1.91
MKKSQ9NPJ1 RPL30P14-201ENST00000482744 348 ntBASIC3.1□□□□□ -1.91
MKKSQ9NPJ1 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.1□□□□□ -1.91
MKKSQ9NPJ1 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.1□□□□□ -1.91
MKKSQ9NPJ1 AC234778.2-201ENST00000566241 354 ntBASIC3.1□□□□□ -1.91
MKKSQ9NPJ1 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.1□□□□□ -1.91
MKKSQ9NPJ1 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 138.5 ms