Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.91□□□□□ -1.94
SIX2Q9NPC8 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.91□□□□□ -1.94
SIX2Q9NPC8 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.91□□□□□ -1.94
SIX2Q9NPC8 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.91□□□□□ -1.94
SIX2Q9NPC8 AC234778.2-201ENST00000566241 354 ntBASIC2.91□□□□□ -1.94
SIX2Q9NPC8 MIR3921-201ENST00000577308 85 ntBASIC2.91□□□□□ -1.94
SIX2Q9NPC8 AC008752.3-201ENST00000588113 712 ntBASIC2.91□□□□□ -1.94
SIX2Q9NPC8 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.91□□□□□ -1.94
SIX2Q9NPC8 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.91□□□□□ -1.94
SIX2Q9NPC8 AL162413.1-201ENST00000603198 110 ntBASIC2.91□□□□□ -1.94
SIX2Q9NPC8 AP000907.4-201ENST00000604143 237 ntBASIC2.91□□□□□ -1.94
SIX2Q9NPC8 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SIX2Q9NPC8 AL589994.2-201ENST00000621124 579 ntBASIC2.91□□□□□ -1.94
SIX2Q9NPC8 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.91□□□□□ -1.94
SIX2Q9NPC8 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.91□□□□□ -1.94
SIX2Q9NPC8 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.91□□□□□ -1.94
SIX2Q9NPC8 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.91□□□□□ -1.94
SIX2Q9NPC8 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
SIX2Q9NPC8 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SIX2Q9NPC8 AC093536.2-201ENST00000565257 1406 ntBASIC2.91□□□□□ -1.94
SIX2Q9NPC8 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
SIX2Q9NPC8 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
SIX2Q9NPC8 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
SIX2Q9NPC8 Y_RNA.89-201ENST00000363031 102 ntBASIC2.9□□□□□ -1.95
SIX2Q9NPC8 SNORA62.1-201ENST00000364287 154 ntBASIC2.9□□□□□ -1.95
SIX2Q9NPC8 RNU6-534P-201ENST00000364877 106 ntBASIC2.9□□□□□ -1.95
SIX2Q9NPC8 RNU6-946P-201ENST00000383878 107 ntBASIC2.9□□□□□ -1.95
SIX2Q9NPC8 SNORA24.1-201ENST00000384401 135 ntBASIC2.9□□□□□ -1.95
SIX2Q9NPC8 Y_RNA.573-201ENST00000384763 105 ntBASIC2.9□□□□□ -1.95
SIX2Q9NPC8 MIR128-1-201ENST00000384921 82 ntBASIC2.9□□□□□ -1.95
SIX2Q9NPC8 MIR514A1-201ENST00000385133 98 ntBASIC2.9□□□□□ -1.95
SIX2Q9NPC8 AL591416.1-201ENST00000404015 867 ntBASIC2.9□□□□□ -1.95
SIX2Q9NPC8 RNU6-908P-201ENST00000410160 94 ntBASIC2.9□□□□□ -1.95
SIX2Q9NPC8 RNA5SP21-201ENST00000410917 96 ntBASIC2.9□□□□□ -1.95
SIX2Q9NPC8 RN7SKP140-201ENST00000411196 284 ntBASIC2.9□□□□□ -1.95
SIX2Q9NPC8 AC114491.1-201ENST00000416095 246 ntBASIC2.9□□□□□ -1.95
SIX2Q9NPC8 YPEL5P1-201ENST00000419731 367 ntBASIC2.9□□□□□ -1.95
SIX2Q9NPC8 AL451054.2-201ENST00000420896 202 ntBASIC2.9□□□□□ -1.95
SIX2Q9NPC8 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.9□□□□□ -1.95
SIX2Q9NPC8 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.9□□□□□ -1.95
SIX2Q9NPC8 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.9□□□□□ -1.95
SIX2Q9NPC8 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.9□□□□□ -1.95
SIX2Q9NPC8 CACYBPP2-201ENST00000453625 678 ntBASIC2.9□□□□□ -1.95
SIX2Q9NPC8 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.9□□□□□ -1.95
SIX2Q9NPC8 RNU6-261P-201ENST00000459506 102 ntBASIC2.9□□□□□ -1.95
SIX2Q9NPC8 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.9□□□□□ -1.95
SIX2Q9NPC8 AC233702.1-201ENST00000482905 502 ntBASIC2.9□□□□□ -1.95
SIX2Q9NPC8 AL049874.1-201ENST00000489560 388 ntBASIC2.9□□□□□ -1.95
SIX2Q9NPC8 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.9□□□□□ -1.95
SIX2Q9NPC8 NRON-201ENST00000517270 370 ntBASIC2.9□□□□□ -1.95
SIX2Q9NPC8 MTND1P35-201ENST00000526739 508 ntBASIC2.9□□□□□ -1.95
SIX2Q9NPC8 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
SIX2Q9NPC8 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.9□□□□□ -1.95
SIX2Q9NPC8 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.9□□□□□ -1.95
SIX2Q9NPC8 AC068135.2-201ENST00000569293 1028 ntBASIC2.9□□□□□ -1.95
SIX2Q9NPC8 MIR4775-201ENST00000581168 75 ntBASIC2.9□□□□□ -1.95
SIX2Q9NPC8 DPPA3P3-201ENST00000603842 430 ntBASIC2.9□□□□□ -1.95
SIX2Q9NPC8 AC007619.2-201ENST00000605743 379 ntBASIC2.9□□□□□ -1.95
SIX2Q9NPC8 FER-210ENST00000628534 558 ntTSL 5 BASIC2.9□□□□□ -1.95
SIX2Q9NPC8 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.9□□□□□ -1.95
SIX2Q9NPC8 AC006020.1-201ENST00000420179 1854 ntBASIC2.9□□□□□ -1.95
SIX2Q9NPC8 AC007336.1-201ENST00000576365 3828 ntBASIC2.9□□□□□ -1.95
SIX2Q9NPC8 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.9□□□□□ -1.95
SIX2Q9NPC8 OR4G2P-202ENST00000641004 1759 ntBASIC2.89□□□□□ -1.95
SIX2Q9NPC8 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
SIX2Q9NPC8 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SIX2Q9NPC8 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.89□□□□□ -1.95
SIX2Q9NPC8 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.89□□□□□ -1.95
SIX2Q9NPC8 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SIX2Q9NPC8 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
SIX2Q9NPC8 RNU6-179P-201ENST00000363350 107 ntBASIC2.89□□□□□ -1.95
SIX2Q9NPC8 RNA5SP387-201ENST00000364226 106 ntBASIC2.89□□□□□ -1.95
SIX2Q9NPC8 Y_RNA.295-201ENST00000364918 102 ntBASIC2.89□□□□□ -1.95
SIX2Q9NPC8 RNU6-61P-201ENST00000365528 109 ntBASIC2.89□□□□□ -1.95
SIX2Q9NPC8 SNORA69-201ENST00000383895 132 ntBASIC2.89□□□□□ -1.95
SIX2Q9NPC8 SNORA9-201ENST00000384215 133 ntBASIC2.89□□□□□ -1.95
SIX2Q9NPC8 SNORA48.2-201ENST00000390926 124 ntBASIC2.89□□□□□ -1.95
SIX2Q9NPC8 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.89□□□□□ -1.95
SIX2Q9NPC8 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.89□□□□□ -1.95
SIX2Q9NPC8 RPL7L1P10-201ENST00000427790 463 ntBASIC2.89□□□□□ -1.95
SIX2Q9NPC8 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.89□□□□□ -1.95
SIX2Q9NPC8 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.89□□□□□ -1.95
SIX2Q9NPC8 AC087499.2-201ENST00000432861 149 ntBASIC2.89□□□□□ -1.95
SIX2Q9NPC8 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.89□□□□□ -1.95
SIX2Q9NPC8 NFU1P2-201ENST00000448700 469 ntBASIC2.89□□□□□ -1.95
SIX2Q9NPC8 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.89□□□□□ -1.95
SIX2Q9NPC8 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.89□□□□□ -1.95
SIX2Q9NPC8 RNU7-182P-201ENST00000459009 62 ntBASIC2.89□□□□□ -1.95
SIX2Q9NPC8 RPS20P20-201ENST00000460498 340 ntBASIC2.89□□□□□ -1.95
SIX2Q9NPC8 AC006512.1-201ENST00000468816 291 ntBASIC2.89□□□□□ -1.95
SIX2Q9NPC8 VN1R17P-201ENST00000472048 1090 ntBASIC2.89□□□□□ -1.95
SIX2Q9NPC8 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SIX2Q9NPC8 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.89□□□□□ -1.95
SIX2Q9NPC8 AL359273.1-201ENST00000510918 627 ntBASIC2.89□□□□□ -1.95
SIX2Q9NPC8 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.89□□□□□ -1.95
SIX2Q9NPC8 SNORA31.3-201ENST00000516029 96 ntBASIC2.89□□□□□ -1.95
SIX2Q9NPC8 SNORA70.16-201ENST00000516390 95 ntBASIC2.89□□□□□ -1.95
SIX2Q9NPC8 RNU2-58P-201ENST00000516403 183 ntBASIC2.89□□□□□ -1.95
SIX2Q9NPC8 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.89□□□□□ -1.95
SIX2Q9NPC8 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms